RNA–Protein interactions for RNA: ENST00000233505.12

CENPA-201, Transcript of centromere protein A, humanhuman

TSL 1 (best) BASIC

Gene CENPA, Length 1,299 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-201ENST00000233505 SAP30BPQ9UHR5 308 aaKnown RBP23.1■■□□□ 1.29
CENPA-201ENST00000233505 DDX60LQ5H9U9 1706 aaKnown RBP23.09■■□□□ 1.29
CENPA-201ENST00000233505 A0A0D9SFI3 127 aa23.09■■□□□ 1.29
CENPA-201ENST00000233505 PHF20L1A8MW92 1017 aa23.09■■□□□ 1.29
CENPA-201ENST00000233505 NMIQ13287 307 aaPredicted RBP23.09■■□□□ 1.29
CENPA-201ENST00000233505 MCMDC2Q4G0Z9 681 aa23.09■■□□□ 1.29
CENPA-201ENST00000233505 NOL9Q5SY16 702 aaKnown RBP23.09■■□□□ 1.29
CENPA-201ENST00000233505 FAM227BQ96M60 508 aa23.09■■□□□ 1.29
CENPA-201ENST00000233505 DIAPH3Q9NSV4 1193 aa23.09■■□□□ 1.29
CENPA-201ENST00000233505 CSADQ9Y600 493 aa23.09■■□□□ 1.29
CENPA-201ENST00000233505 THSD7BQ9C0I4 1608 aa23.08■■□□□ 1.29
CENPA-201ENST00000233505 FOCADQ5VW36 1801 aa23.08■■□□□ 1.29
CENPA-201ENST00000233505 GSG1L2A8MUP6 293 aa23.08■■□□□ 1.29
CENPA-201ENST00000233505 FAM155AB1AL88 458 aaPredicted RBP23.08■■□□□ 1.29
CENPA-201ENST00000233505 NOGQ13253 232 aa23.08■■□□□ 1.29
CENPA-201ENST00000233505 VGLL4Q14135 290 aa23.08■■□□□ 1.29
CENPA-201ENST00000233505 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.08■■□□□ 1.29
CENPA-201ENST00000233505 PATL2C9JE40 543 aaKnown RBP23.07■■□□□ 1.28
CENPA-201ENST00000233505 POLR3DP05423 398 aaPredicted RBP23.07■■□□□ 1.28
CENPA-201ENST00000233505 AMOTL1Q8IY63 956 aa23.07■■□□□ 1.28
CENPA-201ENST00000233505 SLC10A4Q96EP9 437 aa23.07■■□□□ 1.28
CENPA-201ENST00000233505 CLMNQ96JQ2 1002 aa23.07■■□□□ 1.28
CENPA-201ENST00000233505 DNAJC18Q9H819 358 aa23.07■■□□□ 1.28
CENPA-201ENST00000233505 ARPP21Q9UBL0 812 aaPredicted RBP23.07■■□□□ 1.28
CENPA-201ENST00000233505 SERPINB13Q9UIV8 391 aa23.07■■□□□ 1.28
CENPA-201ENST00000233505 MAP2K2P36507 400 aa23.06■■□□□ 1.28
CENPA-201ENST00000233505 MFAP1P55081 439 aaKnown RBP23.06■■□□□ 1.28
CENPA-201ENST00000233505 GABPAQ06546 454 aa23.06■■□□□ 1.28
CENPA-201ENST00000233505 SBK1Q52WX2 424 aa23.06■■□□□ 1.28
CENPA-201ENST00000233505 TNS4Q8IZW8 715 aa23.06■■□□□ 1.28
CENPA-201ENST00000233505 CRACR2BQ8N4Y2 399 aaPredicted RBP23.06■■□□□ 1.28
CENPA-201ENST00000233505 NACAP1Q9BZK3 213 aa23.06■■□□□ 1.28
CENPA-201ENST00000233505 EPB41L4AQ9HCS5 686 aaPredicted RBP23.06■■□□□ 1.28
CENPA-201ENST00000233505 SNCAIPQ9Y6H5 919 aa23.06■■□□□ 1.28
CENPA-201ENST00000233505 SPDYE5A6NIY4 337 aa23.05■■□□□ 1.28
CENPA-201ENST00000233505 CTNND1O60716 968 aaKnown RBP23.05■■□□□ 1.28
CENPA-201ENST00000233505 ZBTB48P10074 688 aaPredicted RBP23.05■■□□□ 1.28
CENPA-201ENST00000233505 INPP5BP32019 993 aa23.05■■□□□ 1.28
CENPA-201ENST00000233505 PLCD1P51178 756 aa23.05■■□□□ 1.28
CENPA-201ENST00000233505 C12orf60Q5U649 245 aa23.05■■□□□ 1.28
CENPA-201ENST00000233505 SKAP1Q86WV1 359 aa23.05■■□□□ 1.28
CENPA-201ENST00000233505 TRIM34Q9BYJ4 488 aa23.05■■□□□ 1.28
CENPA-201ENST00000233505 CCDC171Q6TFL3 1326 aa23.05■■□□□ 1.28
CENPA-201ENST00000233505 RAD50Q92878 1312 aa23.05■■□□□ 1.28
CENPA-201ENST00000233505 USP17L12C9JPN9 530 aa23.04■■□□□ 1.28
CENPA-201ENST00000233505 USP17L21D6R901 530 aa23.04■■□□□ 1.28
CENPA-201ENST00000233505 MAP2K1Q02750 393 aaPredicted RBP23.04■■□□□ 1.28
CENPA-201ENST00000233505 SPRYD7Q5W111 196 aa23.04■■□□□ 1.28
CENPA-201ENST00000233505 CCDC129Q6ZRS4 1044 aa23.04■■□□□ 1.28
CENPA-201ENST00000233505 SCYL3Q8IZE3 742 aa23.04■■□□□ 1.28
CENPA-201ENST00000233505 ZKSCAN4Q969J2 545 aaPredicted RBP23.04■■□□□ 1.28
CENPA-201ENST00000233505 WNK4Q96J92 1243 aa23.04■■□□□ 1.28
CENPA-201ENST00000233505 GINM1Q9NU53 330 aa23.04■■□□□ 1.28
CENPA-201ENST00000233505 CDK5RAP2Q96SN8 1893 aa23.04■■□□□ 1.28
CENPA-201ENST00000233505 FAM196BA6NMK8 535 aa23.03■■□□□ 1.28
CENPA-201ENST00000233505 FOXP2O15409 715 aa23.03■■□□□ 1.28
CENPA-201ENST00000233505 SLURP2P0DP57 97 aa23.03■■□□□ 1.28
CENPA-201ENST00000233505 CHMLP26374 656 aa23.03■■□□□ 1.28
CENPA-201ENST00000233505 CTCFP49711 727 aaPredicted RBP23.03■■□□□ 1.28
CENPA-201ENST00000233505 TATDN1Q6P1N9 297 aa23.03■■□□□ 1.28
CENPA-201ENST00000233505 CTR9Q6PD62 1173 aa23.03■■□□□ 1.28
CENPA-201ENST00000233505 ZNF589Q86UQ0 364 aaPredicted RBP23.03■■□□□ 1.28
CENPA-201ENST00000233505 ERO1BQ86YB8 467 aa23.03■■□□□ 1.28
CENPA-201ENST00000233505 IFNL3Q8IZI9 196 aa23.03■■□□□ 1.28
CENPA-201ENST00000233505 ELP3Q9H9T3 547 aa23.03■■□□□ 1.28
CENPA-201ENST00000233505 SWAP70Q9UH65 585 aa23.03■■□□□ 1.28
CENPA-201ENST00000233505 ZMYM6O95789 1325 aa23.03■■□□□ 1.28
CENPA-201ENST00000233505 ROBO3Q96MS0 1386 aa23.02■■□□□ 1.28
CENPA-201ENST00000233505 TDO2P48775 406 aa23.02■■□□□ 1.28
CENPA-201ENST00000233505 LBX1P52954 281 aa23.02■■□□□ 1.28
CENPA-201ENST00000233505 ALX1Q15699 326 aa23.02■■□□□ 1.28
CENPA-201ENST00000233505 CWC27Q6UX04 472 aaKnown RBP23.02■■□□□ 1.28
CENPA-201ENST00000233505 REM2Q8IYK8 340 aaPredicted RBP23.02■■□□□ 1.28
CENPA-201ENST00000233505 NAV1Q8NEY1 1877 aa23.02■■□□□ 1.28
CENPA-201ENST00000233505 APPP05067 770 aa23.01■■□□□ 1.27
CENPA-201ENST00000233505 CYP2D6P10635 497 aa23.01■■□□□ 1.27
CENPA-201ENST00000233505 HSPA8P11142 646 aaKnown RBP23.01■■□□□ 1.27
CENPA-201ENST00000233505 CAP2P40123 477 aa23.01■■□□□ 1.27
CENPA-201ENST00000233505 SLC4A8Q2Y0W8 1093 aa23.01■■□□□ 1.27
CENPA-201ENST00000233505 RUFY2Q8WXA3 655 aa23.01■■□□□ 1.27
CENPA-201ENST00000233505 OPTNQ96CV9 577 aa23.01■■□□□ 1.27
CENPA-201ENST00000233505 ZIC5Q96T25 663 aa23.01■■□□□ 1.27
CENPA-201ENST00000233505 NAPBQ9H115 298 aa23.01■■□□□ 1.27
CENPA-201ENST00000233505 PICK1Q9NRD5 415 aa23.01■■□□□ 1.27
CENPA-201ENST00000233505 SIPA1L1O43166 1804 aa23.01■■□□□ 1.27
CENPA-201ENST00000233505 SHMT1P34896 483 aa23■■□□□ 1.27
CENPA-201ENST00000233505 PPATQ06203 517 aa23■■□□□ 1.27
CENPA-201ENST00000233505 PPIL2Q13356 520 aa23■■□□□ 1.27
CENPA-201ENST00000233505 VPS53Q5VIR6 699 aa23■■□□□ 1.27
CENPA-201ENST00000233505 C16orf86Q6ZW13 317 aa23■■□□□ 1.27
CENPA-201ENST00000233505 TSKSQ9UJT2 592 aa23■■□□□ 1.27
CENPA-201ENST00000233505 OTOFQ9HC10 1997 aa23■■□□□ 1.27
CENPA-201ENST00000233505 HSPD1P10809 573 aaKnown RBP22.99■■□□□ 1.27
CENPA-201ENST00000233505 GJA5P36382 358 aa22.99■■□□□ 1.27
CENPA-201ENST00000233505 RRP1BQ14684 758 aaKnown RBP22.99■■□□□ 1.27
CENPA-201ENST00000233505 TBC1D2Q9BYX2 928 aa22.99■■□□□ 1.27
CENPA-201ENST00000233505 CYP2D7A0A087X1C5 515 aa22.98■■□□□ 1.27
CENPA-201ENST00000233505 ASNSP08243 561 aa22.98■■□□□ 1.27
CENPA-201ENST00000233505 EVX2Q03828 476 aa22.98■■□□□ 1.27
CENPA-201ENST00000233505 PRDM10Q9NQV6 1147 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms