RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 FBXL5Q9UKA1 691 aa9.5□□□□□ -0.89
SPARC-201ENST00000231061 MAP3K5Q99683 1374 aa9.5□□□□□ -0.89
SPARC-201ENST00000231061 IBTKQ9P2D0 1353 aaPredicted RBP9.5□□□□□ -0.89
SPARC-201ENST00000231061 RFX1P22670 979 aa9.5□□□□□ -0.89
SPARC-201ENST00000231061 SIM2Q14190 667 aaPredicted RBP9.5□□□□□ -0.89
SPARC-201ENST00000231061 NKX1-1Q15270 411 aaPredicted RBP9.5□□□□□ -0.89
SPARC-201ENST00000231061 ZNF449Q6P9G9 518 aa9.5□□□□□ -0.89
SPARC-201ENST00000231061 OTUD6AQ7L8S5 288 aa9.5□□□□□ -0.89
SPARC-201ENST00000231061 CCAR1Q8IX12 1150 aaKnown RBP9.5□□□□□ -0.89
SPARC-201ENST00000231061 CCDC191Q8NCU4 936 aa9.5□□□□□ -0.89
SPARC-201ENST00000231061 ARMC2Q8NEN0 867 aa9.5□□□□□ -0.89
SPARC-201ENST00000231061 PPP1R9BQ96SB3 815 aa9.5□□□□□ -0.89
SPARC-201ENST00000231061 TCHPQ9BT92 498 aa9.5□□□□□ -0.89
SPARC-201ENST00000231061 SRCIN1Q9C0H9 1055 aa9.5□□□□□ -0.89
SPARC-201ENST00000231061 SPC25Q9HBM1 224 aa9.5□□□□□ -0.89
SPARC-201ENST00000231061 INMTO95050 263 aa9.49□□□□□ -0.89
SPARC-201ENST00000231061 PKN1Q16512 942 aa9.49□□□□□ -0.89
SPARC-201ENST00000231061 CCDC80Q76M96 950 aa9.49□□□□□ -0.89
SPARC-201ENST00000231061 PPP1R42Q7Z4L9 355 aa9.49□□□□□ -0.89
SPARC-201ENST00000231061 CEP57L1Q8IYX8 460 aa9.49□□□□□ -0.89
SPARC-201ENST00000231061 GIPC2Q8TF65 315 aa9.49□□□□□ -0.89
SPARC-201ENST00000231061 RMDN2Q96LZ7 410 aa9.49□□□□□ -0.89
SPARC-201ENST00000231061 TAOK3Q9H2K8 898 aa9.49□□□□□ -0.89
SPARC-201ENST00000231061 HDAC6Q9UBN7 1215 aa9.49□□□□□ -0.89
SPARC-201ENST00000231061 SRGAP3O43295 1099 aa9.49□□□□□ -0.89
SPARC-201ENST00000231061 MYCP01106 439 aaPredicted RBP9.49□□□□□ -0.89
SPARC-201ENST00000231061 CYP1A2P05177 515 aa9.49□□□□□ -0.89
SPARC-201ENST00000231061 GCKP35557 465 aa9.49□□□□□ -0.89
SPARC-201ENST00000231061 RRP12Q5JTH9 1297 aaKnown RBP9.49□□□□□ -0.89
SPARC-201ENST00000231061 CTNNBL1Q8WYA6 563 aaPredicted RBP9.49□□□□□ -0.89
SPARC-201ENST00000231061 USP44Q9H0E7 712 aa9.49□□□□□ -0.89
SPARC-201ENST00000231061 GDPD2Q9HCC8 539 aa9.49□□□□□ -0.89
SPARC-201ENST00000231061 SCHIP1Q9P0W5 487 aaPredicted RBP9.49□□□□□ -0.89
SPARC-201ENST00000231061 ZMAT5Q9UDW3 170 aaKnown RBP9.49□□□□□ -0.89
SPARC-201ENST00000231061 NSFL1CQ9UNZ2 370 aaKnown RBP9.49□□□□□ -0.89
SPARC-201ENST00000231061 KDRP35968 1356 aa9.49□□□□□ -0.89
SPARC-201ENST00000231061 BIRC3Q13489 604 aa9.49□□□□□ -0.89
SPARC-201ENST00000231061 RASGRP2Q7LDG7 609 aa9.49□□□□□ -0.89
SPARC-201ENST00000231061 NAP1L4Q99733 375 aaKnown RBP9.49□□□□□ -0.89
SPARC-201ENST00000231061 MBD3O95983 291 aa9.48□□□□□ -0.89
SPARC-201ENST00000231061 ANXA1P04083 346 aa9.48□□□□□ -0.89
SPARC-201ENST00000231061 EIF4BP23588 611 aaKnown RBP9.48□□□□□ -0.89
SPARC-201ENST00000231061 RSRC1Q96IZ7 334 aaKnown RBP9.48□□□□□ -0.89
SPARC-201ENST00000231061 SPATA17Q96L03 361 aa9.48□□□□□ -0.89
SPARC-201ENST00000231061 SOS1Q07889 1333 aaPredicted RBP9.48□□□□□ -0.89
SPARC-201ENST00000231061 SALL3Q9BXA9 1300 aa9.48□□□□□ -0.89
SPARC-201ENST00000231061 TRIM21P19474 475 aaKnown RBP9.48□□□□□ -0.89
SPARC-201ENST00000231061 GPS2Q13227 327 aa9.48□□□□□ -0.89
SPARC-201ENST00000231061 RCN1Q15293 331 aa9.48□□□□□ -0.89
SPARC-201ENST00000231061 MSL1Q68DK7 614 aa9.48□□□□□ -0.89
SPARC-201ENST00000231061 CCSAPQ6IQ19 270 aaPredicted RBP9.48□□□□□ -0.89
SPARC-201ENST00000231061 ATP11CQ8NB49 1132 aa9.48□□□□□ -0.89
SPARC-201ENST00000231061 GSDMBQ8TAX9 411 aa9.48□□□□□ -0.89
SPARC-201ENST00000231061 RNASEH2AO75792 299 aaKnown RBP9.48□□□□□ -0.89
SPARC-201ENST00000231061 EGFLAMQ63HQ2 1017 aa9.48□□□□□ -0.89
SPARC-201ENST00000231061 CCDC174Q6PII3 467 aa9.48□□□□□ -0.89
SPARC-201ENST00000231061 RBM17Q96I25 401 aaKnown RBP9.48□□□□□ -0.89
SPARC-201ENST00000231061 CEP295NLQ96MC4 621 aa9.48□□□□□ -0.89
SPARC-201ENST00000231061 OSBPL10Q9BXB5 764 aa9.48□□□□□ -0.89
SPARC-201ENST00000231061 PRELID1Q9Y255 219 aa9.48□□□□□ -0.89
SPARC-201ENST00000231061 SEMA3EO15041 775 aa9.47□□□□□ -0.89
SPARC-201ENST00000231061 SCNN1BP51168 640 aa9.47□□□□□ -0.89
SPARC-201ENST00000231061 LRSAM1Q6UWE0 723 aa9.47□□□□□ -0.89
SPARC-201ENST00000231061 SYAP1Q96A49 352 aaPredicted RBP9.47□□□□□ -0.89
SPARC-201ENST00000231061 TMEM87BQ96K49 555 aa9.47□□□□□ -0.89
SPARC-201ENST00000231061 SERPINA10Q9UK55 444 aa9.47□□□□□ -0.89
SPARC-201ENST00000231061 TMA7Q9Y2S6 64 aaKnown RBP9.47□□□□□ -0.89
SPARC-201ENST00000231061 SSH2Q76I76 1423 aa9.47□□□□□ -0.89
SPARC-201ENST00000231061 SRLQ86TD4 932 aa9.47□□□□□ -0.89
SPARC-201ENST00000231061 KIF18AQ8NI77 898 aa9.47□□□□□ -0.89
SPARC-201ENST00000231061 RHPN1Q8TCX5 695 aa9.47□□□□□ -0.89
SPARC-201ENST00000231061 IWS1Q96ST2 819 aa9.47□□□□□ -0.89
SPARC-201ENST00000231061 CLIP2Q9UDT6 1046 aa9.47□□□□□ -0.89
SPARC-201ENST00000231061 UBR1Q8IWV7 1749 aa9.47□□□□□ -0.89
SPARC-201ENST00000231061 RPSAP08865 295 aaKnown RBP9.47□□□□□ -0.89
SPARC-201ENST00000231061 PPP2R5CQ13362 524 aa9.47□□□□□ -0.89
SPARC-201ENST00000231061 SPATA21Q7Z572 469 aa9.47□□□□□ -0.89
SPARC-201ENST00000231061 TEX11Q8IYF3 940 aa9.47□□□□□ -0.89
SPARC-201ENST00000231061 NEK11Q8NG66 645 aa9.47□□□□□ -0.89
SPARC-201ENST00000231061 BRD8Q9H0E9 1235 aa9.47□□□□□ -0.89
SPARC-201ENST00000231061 IL25Q9H293 177 aa9.47□□□□□ -0.89
SPARC-201ENST00000231061 KIF9Q9HAQ2 790 aa9.47□□□□□ -0.89
SPARC-201ENST00000231061 DIAPH3Q9NSV4 1193 aa9.47□□□□□ -0.89
SPARC-201ENST00000231061 STAP2Q9UGK3 403 aa9.47□□□□□ -0.89
SPARC-201ENST00000231061 RAD50Q92878 1312 aa9.47□□□□□ -0.89
SPARC-201ENST00000231061 hCG_1984214I3L0E3 225 aa9.46□□□□□ -0.89
SPARC-201ENST00000231061 BIN1O00499 593 aa9.46□□□□□ -0.89
SPARC-201ENST00000231061 E2F6O75461 281 aa9.46□□□□□ -0.89
SPARC-201ENST00000231061 MSL3P1P0C860 447 aa9.46□□□□□ -0.89
SPARC-201ENST00000231061 HOXD10P28358 340 aa9.46□□□□□ -0.89
SPARC-201ENST00000231061 TUFMP49411 452 aaKnown RBP9.46□□□□□ -0.89
SPARC-201ENST00000231061 TEFQ10587 303 aa9.46□□□□□ -0.89
SPARC-201ENST00000231061 PDAP1Q13442 181 aaKnown RBP9.46□□□□□ -0.89
SPARC-201ENST00000231061 TAF1CQ15572 869 aaPredicted RBP9.46□□□□□ -0.89
SPARC-201ENST00000231061 PLEKHG6Q3KR16 790 aa9.46□□□□□ -0.89
SPARC-201ENST00000231061 HS1BP3Q53T59 392 aa9.46□□□□□ -0.89
SPARC-201ENST00000231061 CWC27Q6UX04 472 aaKnown RBP9.46□□□□□ -0.89
SPARC-201ENST00000231061 ANKRD13DQ6ZTN6 518 aa9.46□□□□□ -0.89
SPARC-201ENST00000231061 SLC7A5P1Q8MH63 180 aa9.46□□□□□ -0.89
SPARC-201ENST00000231061 CNTROBQ8N137 903 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms