RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 WNK3Q9BYP7 1800 aa18.71■□□□□ 0.59
LTBR-201ENST00000228918 WTAPQ15007 396 aa18.71■□□□□ 0.59
LTBR-201ENST00000228918 SART3Q15020 963 aaKnown RBP18.71■□□□□ 0.59
LTBR-201ENST00000228918 SAFBQ15424 915 aaKnown RBP eCLIP18.71■□□□□ 0.59
LTBR-201ENST00000228918 SUSD4Q5VX71 490 aa18.71■□□□□ 0.59
LTBR-201ENST00000228918 VSTM4Q8IW00 320 aa18.71■□□□□ 0.59
LTBR-201ENST00000228918 TRIM22Q8IYM9 498 aa18.71■□□□□ 0.59
LTBR-201ENST00000228918 ZNF397Q8NF99 534 aaPredicted RBP18.71■□□□□ 0.59
LTBR-201ENST00000228918 NACAP1Q9BZK3 213 aa18.71■□□□□ 0.59
LTBR-201ENST00000228918 SEC31BQ9NQW1 1179 aa18.71■□□□□ 0.59
LTBR-201ENST00000228918 COL14A1Q05707 1796 aaKnown RBP18.71■□□□□ 0.59
LTBR-201ENST00000228918 LAMB2P55268 1798 aa18.7■□□□□ 0.58
LTBR-201ENST00000228918 ZNF335Q9H4Z2 1342 aaPredicted RBP18.7■□□□□ 0.58
LTBR-201ENST00000228918 BMP6P22004 513 aa18.7■□□□□ 0.58
LTBR-201ENST00000228918 MDM2Q00987 491 aaPredicted RBP18.7■□□□□ 0.58
LTBR-201ENST00000228918 CFAP100Q494V2 611 aa18.7■□□□□ 0.58
LTBR-201ENST00000228918 RRP12Q5JTH9 1297 aaKnown RBP18.7■□□□□ 0.58
LTBR-201ENST00000228918 SYTL4Q96C24 671 aaPredicted RBP18.7■□□□□ 0.58
LTBR-201ENST00000228918 ZKSCAN3Q9BRR0 538 aa18.7■□□□□ 0.58
LTBR-201ENST00000228918 MTA3Q9BTC8 594 aa18.7■□□□□ 0.58
LTBR-201ENST00000228918 BCL11BQ9C0K0 894 aaPredicted RBP18.7■□□□□ 0.58
LTBR-201ENST00000228918 FOXP1Q9H334 677 aaPredicted RBP18.7■□□□□ 0.58
LTBR-201ENST00000228918 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.7■□□□□ 0.58
LTBR-201ENST00000228918 DDX41Q9UJV9 622 aaKnown RBP18.7■□□□□ 0.58
LTBR-201ENST00000228918 FBXO2Q9UK22 296 aaPredicted RBP18.7■□□□□ 0.58
LTBR-201ENST00000228918 KCNJ14Q9UNX9 436 aa18.7■□□□□ 0.58
LTBR-201ENST00000228918 SLC4A4Q9Y6R1 1079 aa18.7■□□□□ 0.58
LTBR-201ENST00000228918 V9GYY5 206 aaPredicted RBP18.7■□□□□ 0.58
LTBR-201ENST00000228918 MYH6P13533 1939 aa18.7■□□□□ 0.58
LTBR-201ENST00000228918 FOXN1O15353 648 aa18.7■□□□□ 0.58
LTBR-201ENST00000228918 TUBB4AP04350 444 aa18.7■□□□□ 0.58
LTBR-201ENST00000228918 SYT10Q6XYQ8 523 aa18.7■□□□□ 0.58
LTBR-201ENST00000228918 DEXIO95424 95 aa18.69■□□□□ 0.58
LTBR-201ENST00000228918 PTPREP23469 700 aa18.69■□□□□ 0.58
LTBR-201ENST00000228918 RCAN1P53805 252 aa18.69■□□□□ 0.58
LTBR-201ENST00000228918 EIF5P55010 431 aaKnown RBP18.69■□□□□ 0.58
LTBR-201ENST00000228918 PDE4BQ07343 736 aa18.69■□□□□ 0.58
LTBR-201ENST00000228918 ELF2Q15723 593 aa18.69■□□□□ 0.58
LTBR-201ENST00000228918 RILPL1Q5EBL4 403 aa18.69■□□□□ 0.58
LTBR-201ENST00000228918 SPECC1Q5M775 1068 aa18.69■□□□□ 0.58
LTBR-201ENST00000228918 TMX1Q9H3N1 280 aa18.69■□□□□ 0.58
LTBR-201ENST00000228918 FANCLQ9NW38 375 aa18.69■□□□□ 0.58
LTBR-201ENST00000228918 CCP110O43303 1012 aa18.69■□□□□ 0.58
LTBR-201ENST00000228918 GRIN1Q05586 938 aa18.69■□□□□ 0.58
LTBR-201ENST00000228918 TOMM22Q9NS69 142 aa18.69■□□□□ 0.58
LTBR-201ENST00000228918 HOOK1Q9UJC3 728 aaKnown RBP18.69■□□□□ 0.58
LTBR-201ENST00000228918 BCAMP50895 628 aa18.68■□□□□ 0.58
LTBR-201ENST00000228918 KMT5BQ4FZB7 885 aa18.68■□□□□ 0.58
LTBR-201ENST00000228918 CRACR2BQ8N4Y2 399 aaPredicted RBP18.68■□□□□ 0.58
LTBR-201ENST00000228918 BCL9LQ86UU0 1499 aa18.68■□□□□ 0.58
LTBR-201ENST00000228918 ERICH2A1L162 156 aa18.67■□□□□ 0.58
LTBR-201ENST00000228918 TMEM232C9JQI7 657 aa18.67■□□□□ 0.58
LTBR-201ENST00000228918 POSTNQ15063 836 aa18.67■□□□□ 0.58
LTBR-201ENST00000228918 CCDC93Q567U6 631 aa18.67■□□□□ 0.58
LTBR-201ENST00000228918 NT5DC1Q5TFE4 455 aa18.67■□□□□ 0.58
LTBR-201ENST00000228918 UTP14AQ9BVJ6 771 aaKnown RBP18.67■□□□□ 0.58
LTBR-201ENST00000228918 INTS13Q9NVM9 706 aa18.67■□□□□ 0.58
LTBR-201ENST00000228918 MAN1B1Q9UKM7 699 aa18.67■□□□□ 0.58
LTBR-201ENST00000228918 RTL9Q8NET4 1388 aa18.67■□□□□ 0.58
LTBR-201ENST00000228918 CCDC196A0A1B0GTZ2 297 aa18.67■□□□□ 0.58
LTBR-201ENST00000228918 TOP1P11387 765 aaKnown RBP18.67■□□□□ 0.58
LTBR-201ENST00000228918 TMTC2Q8N394 836 aa18.67■□□□□ 0.58
LTBR-201ENST00000228918 RNF41Q9H4P4 317 aaPredicted RBP18.67■□□□□ 0.58
LTBR-201ENST00000228918 NR5A1Q13285 461 aa18.66■□□□□ 0.58
LTBR-201ENST00000228918 FBXO38Q6PIJ6 1188 aa18.66■□□□□ 0.58
LTBR-201ENST00000228918 ZNF654Q8IZM8 581 aa18.66■□□□□ 0.58
LTBR-201ENST00000228918 ZNF579Q8NAF0 562 aaKnown RBP18.66■□□□□ 0.58
LTBR-201ENST00000228918 MIGA1Q8NAN2 632 aa18.66■□□□□ 0.58
LTBR-201ENST00000228918 PCDHB6Q9Y5E3 794 aa18.66■□□□□ 0.58
LTBR-201ENST00000228918 RREB1Q92766 1687 aa18.66■□□□□ 0.58
LTBR-201ENST00000228918 EXOC5O00471 708 aa18.66■□□□□ 0.58
LTBR-201ENST00000228918 PRR29P0C7W0 189 aa18.66■□□□□ 0.58
LTBR-201ENST00000228918 ETF1P62495 437 aaKnown RBP18.66■□□□□ 0.58
LTBR-201ENST00000228918 PPARAQ07869 468 aa18.66■□□□□ 0.58
LTBR-201ENST00000228918 CCDC152Q4G0S7 254 aa18.66■□□□□ 0.58
LTBR-201ENST00000228918 CMTR1Q8N1G2 835 aaKnown RBP18.66■□□□□ 0.58
LTBR-201ENST00000228918 FANCBQ8NB91 859 aa18.66■□□□□ 0.58
LTBR-201ENST00000228918 MORC2Q9Y6X9 1032 aaPredicted RBP18.66■□□□□ 0.58
LTBR-201ENST00000228918 PHLPP2Q6ZVD8 1323 aa18.65■□□□□ 0.58
LTBR-201ENST00000228918 POLR2DO15514 142 aaKnown RBP18.65■□□□□ 0.58
LTBR-201ENST00000228918 IGHMBP2P38935 993 aaKnown RBP18.65■□□□□ 0.58
LTBR-201ENST00000228918 SARSP49591 514 aaKnown RBP18.65■□□□□ 0.58
LTBR-201ENST00000228918 INTS5Q6P9B9 1019 aaKnown RBP18.65■□□□□ 0.58
LTBR-201ENST00000228918 CCDC82Q8N4S0 544 aa18.65■□□□□ 0.58
LTBR-201ENST00000228918 LRP2BPQ9P2M1 347 aa18.65■□□□□ 0.58
LTBR-201ENST00000228918 SERTAD1Q9UHV2 236 aa18.65■□□□□ 0.58
LTBR-201ENST00000228918 PARP10Q53GL7 1025 aa18.65■□□□□ 0.58
LTBR-201ENST00000228918 FCHSD1Q86WN1 690 aa18.65■□□□□ 0.58
LTBR-201ENST00000228918 TMEM139Q8IV31 216 aa18.65■□□□□ 0.58
LTBR-201ENST00000228918 NUP133Q8WUM0 1156 aa18.65■□□□□ 0.58
LTBR-201ENST00000228918 CCDC87Q9NVE4 849 aa18.65■□□□□ 0.58
LTBR-201ENST00000228918 SRPRBQ9Y5M8 271 aaKnown RBP18.65■□□□□ 0.58
LTBR-201ENST00000228918 CICQ96RK0 1608 aaPredicted RBP18.64■□□□□ 0.58
LTBR-201ENST00000228918 A0A1B0GUL6 1792 aa18.64■□□□□ 0.57
LTBR-201ENST00000228918 ZNF18P17022 549 aa18.64■□□□□ 0.57
LTBR-201ENST00000228918 FMR1Q06787 632 aaKnown RBP eCLIP18.64■□□□□ 0.57
LTBR-201ENST00000228918 GOLGA8FQ08AF8 430 aa18.64■□□□□ 0.57
LTBR-201ENST00000228918 GOLGA8DPQ0D2H9 430 aa18.64■□□□□ 0.57
LTBR-201ENST00000228918 MORC3Q14149 939 aa18.64■□□□□ 0.57
LTBR-201ENST00000228918 HOMER1Q86YM7 354 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms