RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 SDR42E1Q8WUS8 393 aa15.31■□□□□ 0.04
LSM5-201ENST00000223084 CRNKL1Q9BZJ0 848 aaKnown RBP15.31■□□□□ 0.04
LSM5-201ENST00000223084 PUS7LQ9H0K6 701 aaKnown RBP15.31■□□□□ 0.04
LSM5-201ENST00000223084 DHX36Q9H2U1 1008 aaKnown RBP15.31■□□□□ 0.04
LSM5-201ENST00000223084 RNF186Q9NXI6 227 aa15.31■□□□□ 0.04
LSM5-201ENST00000223084 SPDYE5A6NIY4 337 aa15.3■□□□□ 0.04
LSM5-201ENST00000223084 RNF113AO15541 343 aaKnown RBP15.3■□□□□ 0.04
LSM5-201ENST00000223084 TBC1D12O60347 775 aa15.3■□□□□ 0.04
LSM5-201ENST00000223084 TRPA1O75762 1119 aa15.3■□□□□ 0.04
LSM5-201ENST00000223084 TM4SF4P48230 202 aa15.3■□□□□ 0.04
LSM5-201ENST00000223084 LBX1P52954 281 aa15.3■□□□□ 0.04
LSM5-201ENST00000223084 NOL9Q5SY16 702 aaKnown RBP15.3■□□□□ 0.04
LSM5-201ENST00000223084 PLEKHM2Q8IWE5 1019 aa15.3■□□□□ 0.04
LSM5-201ENST00000223084 FSD1Q9BTV5 496 aa15.3■□□□□ 0.04
LSM5-201ENST00000223084 PI4KBQ9UBF8 816 aa15.3■□□□□ 0.04
LSM5-201ENST00000223084 MANSC4A6NHS7 340 aaPredicted RBP15.29■□□□□ 0.04
LSM5-201ENST00000223084 EVX2Q03828 476 aa15.29■□□□□ 0.04
LSM5-201ENST00000223084 SREBF2Q12772 1141 aa15.29■□□□□ 0.04
LSM5-201ENST00000223084 RRP1BQ14684 758 aaKnown RBP15.29■□□□□ 0.04
LSM5-201ENST00000223084 ERO1BQ86YB8 467 aa15.29■□□□□ 0.04
LSM5-201ENST00000223084 REM2Q8IYK8 340 aaPredicted RBP15.29■□□□□ 0.04
LSM5-201ENST00000223084 SCYL3Q8IZE3 742 aa15.29■□□□□ 0.04
LSM5-201ENST00000223084 OSBP2Q969R2 916 aa15.29■□□□□ 0.04
LSM5-201ENST00000223084 DNAJC18Q9H819 358 aa15.29■□□□□ 0.04
LSM5-201ENST00000223084 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.29■□□□□ 0.04
LSM5-201ENST00000223084 IRF6O14896 467 aa15.28■□□□□ 0.04
LSM5-201ENST00000223084 HLA-DOAP06340 250 aa15.28■□□□□ 0.04
LSM5-201ENST00000223084 CCDC84Q86UT8 332 aaPredicted RBP15.28■□□□□ 0.04
LSM5-201ENST00000223084 CRACR2BQ8N4Y2 399 aaPredicted RBP15.28■□□□□ 0.04
LSM5-201ENST00000223084 APPBP2Q92624 585 aa15.28■□□□□ 0.04
LSM5-201ENST00000223084 MS4A4AQ96JQ5 239 aa15.28■□□□□ 0.04
LSM5-201ENST00000223084 DCP1AQ9NPI6 582 aaPredicted RBP15.28■□□□□ 0.04
LSM5-201ENST00000223084 MCM9Q9NXL9 1143 aa15.28■□□□□ 0.04
LSM5-201ENST00000223084 HERC5Q9UII4 1024 aaKnown RBP15.28■□□□□ 0.04
LSM5-201ENST00000223084 NAV1Q8NEY1 1877 aa15.28■□□□□ 0.04
LSM5-201ENST00000223084 BAZ2AQ9UIF9 1905 aaKnown RBP15.27■□□□□ 0.04
LSM5-201ENST00000223084 M0R2C6 588 aa15.27■□□□□ 0.04
LSM5-201ENST00000223084 IGF2BP3O00425 579 aaKnown RBP eCLIP15.27■□□□□ 0.04
LSM5-201ENST00000223084 CA12O43570 354 aa15.27■□□□□ 0.04
LSM5-201ENST00000223084 CTNND1O60716 968 aaKnown RBP15.27■□□□□ 0.04
LSM5-201ENST00000223084 POLR3DP05423 398 aaPredicted RBP15.27■□□□□ 0.04
LSM5-201ENST00000223084 ZFYP08048 801 aaPredicted RBP15.27■□□□□ 0.04
LSM5-201ENST00000223084 CYP2D6P10635 497 aa15.27■□□□□ 0.04
LSM5-201ENST00000223084 PTPRAP18433 802 aa15.27■□□□□ 0.04
LSM5-201ENST00000223084 PDE4AP27815 886 aa15.27■□□□□ 0.04
LSM5-201ENST00000223084 PLCD1P51178 756 aa15.27■□□□□ 0.04
LSM5-201ENST00000223084 PPIL2Q13356 520 aa15.27■□□□□ 0.04
LSM5-201ENST00000223084 IFNL1Q8IU54 200 aa15.27■□□□□ 0.04
LSM5-201ENST00000223084 FOXP4Q8IVH2 680 aaPredicted RBP15.27■□□□□ 0.04
LSM5-201ENST00000223084 BRI3BPQ8WY22 251 aa15.27■□□□□ 0.04
LSM5-201ENST00000223084 EVI5LQ96CN4 794 aa15.27■□□□□ 0.04
LSM5-201ENST00000223084 PTPN18Q99952 460 aa15.27■□□□□ 0.04
LSM5-201ENST00000223084 TRIM34Q9BYJ4 488 aa15.27■□□□□ 0.04
LSM5-201ENST00000223084 PICK1Q9NRD5 415 aa15.27■□□□□ 0.04
LSM5-201ENST00000223084 SLC4A4Q9Y6R1 1079 aa15.27■□□□□ 0.04
LSM5-201ENST00000223084 CASP8AP2Q9UKL3 1982 aa15.26■□□□□ 0.03
LSM5-201ENST00000223084 CCL15-CCL14A0A0B4J2E2 113 aa15.26■□□□□ 0.03
LSM5-201ENST00000223084 TBC1D8O95759 1140 aa15.26■□□□□ 0.03
LSM5-201ENST00000223084 GTF2A2P52657 109 aa15.26■□□□□ 0.03
LSM5-201ENST00000223084 JAG1P78504 1218 aa15.26■□□□□ 0.03
LSM5-201ENST00000223084 PPATQ06203 517 aa15.26■□□□□ 0.03
LSM5-201ENST00000223084 CCL15Q16663 113 aa15.26■□□□□ 0.03
LSM5-201ENST00000223084 SHROOM1Q2M3G4 852 aaPredicted RBP15.26■□□□□ 0.03
LSM5-201ENST00000223084 TTC6Q86TZ1 520 aa15.26■□□□□ 0.03
LSM5-201ENST00000223084 METTL16Q86W50 562 aaKnown RBP15.26■□□□□ 0.03
LSM5-201ENST00000223084 STRBPQ96SI9 672 aaKnown RBP15.26■□□□□ 0.03
LSM5-201ENST00000223084 SEC62Q99442 399 aaKnown RBP15.26■□□□□ 0.03
LSM5-201ENST00000223084 SAGE1Q9NXZ1 904 aa15.26■□□□□ 0.03
LSM5-201ENST00000223084 DOCK1Q14185 1865 aa15.26■□□□□ 0.03
LSM5-201ENST00000223084 DDX60LQ5H9U9 1706 aaKnown RBP15.26■□□□□ 0.03
LSM5-201ENST00000223084 TESPA1A2RU30 521 aaPredicted RBP15.25■□□□□ 0.03
LSM5-201ENST00000223084 TRIM6-TRIM34B2RNG4 842 aa15.25■□□□□ 0.03
LSM5-201ENST00000223084 SMIM22K7EJ46 135 aa15.25■□□□□ 0.03
LSM5-201ENST00000223084 GPAA1O43292 621 aa15.25■□□□□ 0.03
LSM5-201ENST00000223084 GDF11O95390 407 aa15.25■□□□□ 0.03
LSM5-201ENST00000223084 CAP2P40123 477 aa15.25■□□□□ 0.03
LSM5-201ENST00000223084 INHBEP58166 350 aa15.25■□□□□ 0.03
LSM5-201ENST00000223084 RILPL2Q969X0 211 aa15.25■□□□□ 0.03
LSM5-201ENST00000223084 R3HDMLQ9H3Y0 253 aa15.25■□□□□ 0.03
LSM5-201ENST00000223084 OSBPL3Q9H4L5 887 aa15.25■□□□□ 0.03
LSM5-201ENST00000223084 ZHX2Q9Y6X8 837 aa15.25■□□□□ 0.03
LSM5-201ENST00000223084 LAMB1P07942 1786 aa15.25■□□□□ 0.03
LSM5-201ENST00000223084 ATAD5Q96QE3 1844 aa15.24■□□□□ 0.03
LSM5-201ENST00000223084 CYP2D7A0A087X1C5 515 aa15.24■□□□□ 0.03
LSM5-201ENST00000223084 HOXD11P31277 338 aaPredicted RBP15.24■□□□□ 0.03
LSM5-201ENST00000223084 SNAPC2Q13487 334 aa15.24■□□□□ 0.03
LSM5-201ENST00000223084 LRRFIP1Q32MZ4 808 aaKnown RBP15.24■□□□□ 0.03
LSM5-201ENST00000223084 ZMYM1Q5SVZ6 1142 aa15.24■□□□□ 0.03
LSM5-201ENST00000223084 EHD4Q9H223 541 aa15.24■□□□□ 0.03
LSM5-201ENST00000223084 ATP8A2Q9NTI2 1148 aa15.24■□□□□ 0.03
LSM5-201ENST00000223084 SERPINB13Q9UIV8 391 aa15.24■□□□□ 0.03
LSM5-201ENST00000223084 KCNH4Q9UQ05 1017 aa15.24■□□□□ 0.03
LSM5-201ENST00000223084 PHIPQ8WWQ0 1821 aa15.23■□□□□ 0.03
LSM5-201ENST00000223084 GSG1L2A8MUP6 293 aa15.23■□□□□ 0.03
LSM5-201ENST00000223084 USP17L12C9JPN9 530 aa15.23■□□□□ 0.03
LSM5-201ENST00000223084 USP17L21D6R901 530 aa15.23■□□□□ 0.03
LSM5-201ENST00000223084 CETPP11597 493 aa15.23■□□□□ 0.03
LSM5-201ENST00000223084 CCDC129Q6ZRS4 1044 aa15.23■□□□□ 0.03
LSM5-201ENST00000223084 FAM43AQ8N2R8 423 aa15.23■□□□□ 0.03
LSM5-201ENST00000223084 DYNLL2Q96FJ2 89 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms