RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 TEX13AQ9BXU3 409 aaPredicted RBP12.76□□□□□ -0.37
NEFM-201ENST00000221166 CNNM2Q9H8M5 875 aa12.76□□□□□ -0.37
NEFM-201ENST00000221166 TRIM75PA6NK02 468 aa12.75□□□□□ -0.37
NEFM-201ENST00000221166 GTF2E1P29083 439 aaPredicted RBP12.75□□□□□ -0.37
NEFM-201ENST00000221166 CCT6AP40227 531 aaKnown RBP12.75□□□□□ -0.37
NEFM-201ENST00000221166 PUM3Q15397 648 aaKnown RBP12.75□□□□□ -0.37
NEFM-201ENST00000221166 RILPL1Q5EBL4 403 aa12.75□□□□□ -0.37
NEFM-201ENST00000221166 SDR42E1Q8WUS8 393 aa12.75□□□□□ -0.37
NEFM-201ENST00000221166 WDR24Q96S15 920 aa12.75□□□□□ -0.37
NEFM-201ENST00000221166 IRX2Q9BZI1 471 aaPredicted RBP12.75□□□□□ -0.37
NEFM-201ENST00000221166 NBPF3Q9H094 633 aa12.75□□□□□ -0.37
NEFM-201ENST00000221166 CSRNP2Q9H175 543 aa12.75□□□□□ -0.37
NEFM-201ENST00000221166 ZNF446Q9NWS9 450 aa12.75□□□□□ -0.37
NEFM-201ENST00000221166 IGSF22Q8N9C0 903 aa12.75□□□□□ -0.37
NEFM-201ENST00000221166 MLKLQ8NB16 471 aa12.75□□□□□ -0.37
NEFM-201ENST00000221166 BRMS1Q9HCU9 246 aa12.75□□□□□ -0.37
NEFM-201ENST00000221166 KIF5CO60282 957 aa12.75□□□□□ -0.37
NEFM-201ENST00000221166 MTF1Q14872 753 aa12.75□□□□□ -0.37
NEFM-201ENST00000221166 PIGBQ92521 554 aa12.75□□□□□ -0.37
NEFM-201ENST00000221166 LPIN2Q92539 896 aa12.75□□□□□ -0.37
NEFM-201ENST00000221166 ARFGAP3Q9NP61 516 aa12.75□□□□□ -0.37
NEFM-201ENST00000221166 ZCCHC17Q9NP64 241 aaKnown RBP12.75□□□□□ -0.37
NEFM-201ENST00000221166 MAPK8IP1Q9UQF2 711 aa12.75□□□□□ -0.37
NEFM-201ENST00000221166 V9GY48 417 aaPredicted RBP12.75□□□□□ -0.37
NEFM-201ENST00000221166 AKR1B15C9JRZ8 316 aaPredicted RBP12.74□□□□□ -0.37
NEFM-201ENST00000221166 MCM6Q14566 821 aa12.74□□□□□ -0.37
NEFM-201ENST00000221166 L2HGDHQ9H9P8 463 aa12.74□□□□□ -0.37
NEFM-201ENST00000221166 SEC31BQ9NQW1 1179 aa12.74□□□□□ -0.37
NEFM-201ENST00000221166 FBXO3Q9UK99 471 aa12.74□□□□□ -0.37
NEFM-201ENST00000221166 ZBTB1Q9Y2K1 713 aa12.74□□□□□ -0.37
NEFM-201ENST00000221166 LMO7Q8WWI1 1683 aa12.74□□□□□ -0.37
NEFM-201ENST00000221166 CPDO75976 1380 aa12.74□□□□□ -0.37
NEFM-201ENST00000221166 MAP3K15Q6ZN16 1313 aa12.74□□□□□ -0.37
NEFM-201ENST00000221166 PDE8AO60658 829 aa12.74□□□□□ -0.37
NEFM-201ENST00000221166 CCDC175P0C221 793 aa12.74□□□□□ -0.37
NEFM-201ENST00000221166 IGHMBP2P38935 993 aaKnown RBP12.74□□□□□ -0.37
NEFM-201ENST00000221166 ZNF569Q5MCW4 686 aa12.74□□□□□ -0.37
NEFM-201ENST00000221166 LCORLQ8N3X6 602 aa12.74□□□□□ -0.37
NEFM-201ENST00000221166 RNF216Q9NWF9 866 aaPredicted RBP12.74□□□□□ -0.37
NEFM-201ENST00000221166 PHLPP2Q6ZVD8 1323 aa12.74□□□□□ -0.37
NEFM-201ENST00000221166 WDR17Q8IZU2 1322 aa12.74□□□□□ -0.37
NEFM-201ENST00000221166 VWA3AA6NCI4 1184 aa12.74□□□□□ -0.37
NEFM-201ENST00000221166 GOLGA6L9A6NEM1 432 aa12.74□□□□□ -0.37
NEFM-201ENST00000221166 DEXIO95424 95 aa12.74□□□□□ -0.37
NEFM-201ENST00000221166 FMNL1O95466 1100 aaPredicted RBP12.74□□□□□ -0.37
NEFM-201ENST00000221166 MMP1P03956 469 aa12.74□□□□□ -0.37
NEFM-201ENST00000221166 HSPA2P54652 639 aa12.74□□□□□ -0.37
NEFM-201ENST00000221166 GPS2Q13227 327 aa12.74□□□□□ -0.37
NEFM-201ENST00000221166 EPSTI1Q96J88 318 aa12.74□□□□□ -0.37
NEFM-201ENST00000221166 ZFP91Q96JP5 570 aaPredicted RBP12.74□□□□□ -0.37
NEFM-201ENST00000221166 MAP3K14Q99558 947 aa12.74□□□□□ -0.37
NEFM-201ENST00000221166 HPSEQ9Y251 543 aa12.74□□□□□ -0.37
NEFM-201ENST00000221166 SOWAHDA6NJG2 315 aa12.73□□□□□ -0.37
NEFM-201ENST00000221166 N4BP3O15049 544 aa12.73□□□□□ -0.37
NEFM-201ENST00000221166 RASGRF1Q13972 1273 aa12.73□□□□□ -0.37
NEFM-201ENST00000221166 KANK3Q6NY19 840 aa12.73□□□□□ -0.37
NEFM-201ENST00000221166 REXO1L1PQ8IX06 675 aa12.73□□□□□ -0.37
NEFM-201ENST00000221166 ZNF654Q8IZM8 581 aa12.73□□□□□ -0.37
NEFM-201ENST00000221166 ANKRD20A12PQ8NF67 263 aa12.73□□□□□ -0.37
NEFM-201ENST00000221166 NUP88Q99567 741 aaPredicted RBP12.73□□□□□ -0.37
NEFM-201ENST00000221166 BLZF1Q9H2G9 400 aa12.73□□□□□ -0.37
NEFM-201ENST00000221166 FAM205CA6NFA0 338 aa12.73□□□□□ -0.37
NEFM-201ENST00000221166 TEX33O43247 280 aa12.73□□□□□ -0.37
NEFM-201ENST00000221166 RRAGBQ5VZM2 374 aa12.73□□□□□ -0.37
NEFM-201ENST00000221166 FANCBQ8NB91 859 aa12.73□□□□□ -0.37
NEFM-201ENST00000221166 RNF41Q9H4P4 317 aaPredicted RBP12.73□□□□□ -0.37
NEFM-201ENST00000221166 CRYBG1Q9Y4K1 1723 aa12.73□□□□□ -0.37
NEFM-201ENST00000221166 EFCAB8A8MWE9 144 aa12.73□□□□□ -0.37
NEFM-201ENST00000221166 IFNAR1P17181 557 aa12.73□□□□□ -0.37
NEFM-201ENST00000221166 NEK11Q8NG66 645 aa12.73□□□□□ -0.37
NEFM-201ENST00000221166 VPS16Q9H269 839 aa12.73□□□□□ -0.37
NEFM-201ENST00000221166 CSF1RP07333 972 aa12.72□□□□□ -0.37
NEFM-201ENST00000221166 RHOXF2BP0C7M4 288 aa12.72□□□□□ -0.37
NEFM-201ENST00000221166 PCMTD1Q96MG8 357 aaPredicted RBP12.72□□□□□ -0.37
NEFM-201ENST00000221166 RHOXF2Q9BQY4 288 aa12.72□□□□□ -0.37
NEFM-201ENST00000221166 EPB41L4AQ9HCS5 686 aaPredicted RBP12.72□□□□□ -0.37
NEFM-201ENST00000221166 SPATA31A3Q5VYP0 1347 aa12.72□□□□□ -0.37
NEFM-201ENST00000221166 BMP6P22004 513 aa12.72□□□□□ -0.37
NEFM-201ENST00000221166 SKIDA1Q1XH10 827 aa12.72□□□□□ -0.37
NEFM-201ENST00000221166 CATIPQ7Z7H3 387 aa12.72□□□□□ -0.37
NEFM-201ENST00000221166 TICAM2Q86XR7 235 aa12.72□□□□□ -0.37
NEFM-201ENST00000221166 FBXL16Q8N461 479 aa12.72□□□□□ -0.37
NEFM-201ENST00000221166 GOLGA1Q92805 767 aa12.72□□□□□ -0.37
NEFM-201ENST00000221166 PTPREP23469 700 aa12.72□□□□□ -0.37
NEFM-201ENST00000221166 GYS2P54840 703 aa12.72□□□□□ -0.37
NEFM-201ENST00000221166 NTRK3Q16288 839 aa12.72□□□□□ -0.37
NEFM-201ENST00000221166 TSR1Q2NL82 804 aaKnown RBP12.72□□□□□ -0.37
NEFM-201ENST00000221166 ESR2Q92731 530 aa12.72□□□□□ -0.37
NEFM-201ENST00000221166 FAM217BQ9NTX9 383 aaPredicted RBP12.72□□□□□ -0.37
NEFM-201ENST00000221166 CTNND2Q9UQB3 1225 aa12.72□□□□□ -0.37
NEFM-201ENST00000221166 CYP2D7A0A087X1C5 515 aa12.72□□□□□ -0.37
NEFM-201ENST00000221166 STX10O60499 249 aa12.72□□□□□ -0.37
NEFM-201ENST00000221166 OAS2P29728 719 aaKnown RBP12.72□□□□□ -0.37
NEFM-201ENST00000221166 IFIT1BQ5T764 474 aaKnown RBP12.72□□□□□ -0.37
NEFM-201ENST00000221166 TAF3Q5VWG9 929 aa12.72□□□□□ -0.37
NEFM-201ENST00000221166 JAKMIP3Q5VZ66 844 aa12.72□□□□□ -0.37
NEFM-201ENST00000221166 TRIM65Q6PJ69 517 aa12.72□□□□□ -0.37
NEFM-201ENST00000221166 BICDL1Q6ZP65 573 aa12.72□□□□□ -0.37
NEFM-201ENST00000221166 HSD3B7Q9H2F3 369 aa12.72□□□□□ -0.37
NEFM-201ENST00000221166 TADA3O75528 432 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms