RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 CSRNP2Q9H175 543 aa17.29■□□□□ 0.36
EFNB1-201ENST00000204961 GPR108Q9NPR9 543 aa17.29■□□□□ 0.36
EFNB1-201ENST00000204961 PLEKHA8P1O95397 391 aa17.29■□□□□ 0.36
EFNB1-201ENST00000204961 TOGARAM2Q6ZUX3 1019 aa17.29■□□□□ 0.36
EFNB1-201ENST00000204961 CPVLQ9H3G5 476 aa17.29■□□□□ 0.36
EFNB1-201ENST00000204961 SLC5A1P13866 664 aa17.28■□□□□ 0.36
EFNB1-201ENST00000204961 SARM1Q6SZW1 724 aa17.28■□□□□ 0.36
EFNB1-201ENST00000204961 JCADQ9P266 1359 aa17.28■□□□□ 0.36
EFNB1-201ENST00000204961 GSG1L2A8MUP6 293 aa17.28■□□□□ 0.36
EFNB1-201ENST00000204961 CDKL5O76039 1030 aa17.28■□□□□ 0.36
EFNB1-201ENST00000204961 KRBA2Q6ZNG9 492 aa17.28■□□□□ 0.36
EFNB1-201ENST00000204961 KRI1Q8N9T8 703 aaKnown RBP17.28■□□□□ 0.36
EFNB1-201ENST00000204961 WDR24Q96S15 920 aa17.28■□□□□ 0.36
EFNB1-201ENST00000204961 A0A1W2PQ27 194 aa17.27■□□□□ 0.36
EFNB1-201ENST00000204961 A0A1W2PQ64 194 aa17.27■□□□□ 0.36
EFNB1-201ENST00000204961 A0A1W2PQD8 194 aa17.27■□□□□ 0.36
EFNB1-201ENST00000204961 EXOC5O00471 708 aa17.27■□□□□ 0.36
EFNB1-201ENST00000204961 TOB1P50616 345 aaPredicted RBP17.27■□□□□ 0.36
EFNB1-201ENST00000204961 GSDMDP57764 484 aa17.27■□□□□ 0.36
EFNB1-201ENST00000204961 AKNAD1Q5T1N1 836 aa17.27■□□□□ 0.36
EFNB1-201ENST00000204961 NOSTRINQ8IVI9 506 aa17.27■□□□□ 0.36
EFNB1-201ENST00000204961 NYAP1Q6ZVC0 841 aa17.27■□□□□ 0.36
EFNB1-201ENST00000204961 SMARCE1Q969G3 411 aa17.27■□□□□ 0.36
EFNB1-201ENST00000204961 MCM7P33993 719 aa17.27■□□□□ 0.35
EFNB1-201ENST00000204961 SART3Q15020 963 aaKnown RBP17.27■□□□□ 0.35
EFNB1-201ENST00000204961 TFR2Q9UP52 801 aa17.27■□□□□ 0.35
EFNB1-201ENST00000204961 PDE8AO60658 829 aa17.26■□□□□ 0.35
EFNB1-201ENST00000204961 KIF20AO95235 890 aa17.26■□□□□ 0.35
EFNB1-201ENST00000204961 PUM3Q15397 648 aaKnown RBP17.26■□□□□ 0.35
EFNB1-201ENST00000204961 GPR101Q96P66 508 aaPredicted RBP17.26■□□□□ 0.35
EFNB1-201ENST00000204961 VPS16Q9H269 839 aa17.26■□□□□ 0.35
EFNB1-201ENST00000204961 LMO7Q8WWI1 1683 aa17.26■□□□□ 0.35
EFNB1-201ENST00000204961 CAVIN2O95810 425 aa17.26■□□□□ 0.35
EFNB1-201ENST00000204961 NACAP1Q9BZK3 213 aa17.26■□□□□ 0.35
EFNB1-201ENST00000204961 MAN1B1Q9UKM7 699 aa17.26■□□□□ 0.35
EFNB1-201ENST00000204961 SOWAHDA6NJG2 315 aa17.26■□□□□ 0.35
EFNB1-201ENST00000204961 PATL2C9JE40 543 aaKnown RBP17.26■□□□□ 0.35
EFNB1-201ENST00000204961 KCNQ2O43526 872 aa17.26■□□□□ 0.35
EFNB1-201ENST00000204961 CYP2D6P10635 497 aa17.26■□□□□ 0.35
EFNB1-201ENST00000204961 KLRK1P26718 216 aa17.26■□□□□ 0.35
EFNB1-201ENST00000204961 IGHMBP2P38935 993 aaKnown RBP17.26■□□□□ 0.35
EFNB1-201ENST00000204961 POSTNQ15063 836 aa17.26■□□□□ 0.35
EFNB1-201ENST00000204961 PTPAQ15257 358 aa17.26■□□□□ 0.35
EFNB1-201ENST00000204961 ZNF654Q8IZM8 581 aa17.26■□□□□ 0.35
EFNB1-201ENST00000204961 AATFQ9NY61 560 aaKnown RBP eCLIP17.26■□□□□ 0.35
EFNB1-201ENST00000204961 UTRNP46939 3433 aa17.25■□□□□ 0.35
EFNB1-201ENST00000204961 CCDC12Q8WUD4 166 aaPredicted RBP17.25■□□□□ 0.35
EFNB1-201ENST00000204961 HSD3B7Q9H2F3 369 aa17.25■□□□□ 0.35
EFNB1-201ENST00000204961 TNKSO95271 1327 aa17.25■□□□□ 0.35
EFNB1-201ENST00000204961 ADAMTS3O15072 1205 aa17.25■□□□□ 0.35
EFNB1-201ENST00000204961 PPARDQ03181 441 aa17.25■□□□□ 0.35
EFNB1-201ENST00000204961 LPIN2Q92539 896 aa17.25■□□□□ 0.35
EFNB1-201ENST00000204961 FANCGO15287 622 aa17.24■□□□□ 0.35
EFNB1-201ENST00000204961 CSF1RP07333 972 aa17.24■□□□□ 0.35
EFNB1-201ENST00000204961 CYP19A1P11511 503 aaPredicted RBP17.24■□□□□ 0.35
EFNB1-201ENST00000204961 RBM6P78332 1123 aaKnown RBP17.24■□□□□ 0.35
EFNB1-201ENST00000204961 NTRK3Q16288 839 aa17.24■□□□□ 0.35
EFNB1-201ENST00000204961 OGFRQ9NZT2 677 aa17.24■□□□□ 0.35
EFNB1-201ENST00000204961 CHRNDQ07001 517 aa17.24■□□□□ 0.35
EFNB1-201ENST00000204961 TTF1Q15361 905 aaPredicted RBP17.24■□□□□ 0.35
EFNB1-201ENST00000204961 FKBP15Q5T1M5 1219 aa17.24■□□□□ 0.35
EFNB1-201ENST00000204961 C3orf67Q6ZVT6 689 aa17.24■□□□□ 0.35
EFNB1-201ENST00000204961 ZNF397Q8NF99 534 aaPredicted RBP17.24■□□□□ 0.35
EFNB1-201ENST00000204961 GPKOWQ92917 476 aaPredicted RBP eCLIP17.24■□□□□ 0.35
EFNB1-201ENST00000204961 BAG1Q99933 345 aaPredicted RBP17.24■□□□□ 0.35
EFNB1-201ENST00000204961 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.24■□□□□ 0.35
EFNB1-201ENST00000204961 NEMFO60524 1076 aa17.24■□□□□ 0.35
EFNB1-201ENST00000204961 CDC25BP30305 580 aa17.24■□□□□ 0.35
EFNB1-201ENST00000204961 CLCN6P51797 869 aa17.24■□□□□ 0.35
EFNB1-201ENST00000204961 PIK3AP1Q6ZUJ8 805 aa17.24■□□□□ 0.35
EFNB1-201ENST00000204961 FANCBQ8NB91 859 aa17.24■□□□□ 0.35
EFNB1-201ENST00000204961 GDAP1L1Q96MZ0 367 aa17.24■□□□□ 0.35
EFNB1-201ENST00000204961 CARD10Q9BWT7 1032 aa17.24■□□□□ 0.35
EFNB1-201ENST00000204961 VAT1LQ9HCJ6 419 aa17.24■□□□□ 0.35
EFNB1-201ENST00000204961 INTS13Q9NVM9 706 aa17.24■□□□□ 0.35
EFNB1-201ENST00000204961 USP17L12C9JPN9 530 aa17.23■□□□□ 0.35
EFNB1-201ENST00000204961 USP17L21D6R901 530 aa17.23■□□□□ 0.35
EFNB1-201ENST00000204961 RAD21O60216 631 aa17.23■□□□□ 0.35
EFNB1-201ENST00000204961 EVCP57679 992 aa17.23■□□□□ 0.35
EFNB1-201ENST00000204961 RASGRP2Q7LDG7 609 aa17.23■□□□□ 0.35
EFNB1-201ENST00000204961 CCDC150Q8NCX0 1101 aa17.23■□□□□ 0.35
EFNB1-201ENST00000204961 SOS2Q07890 1332 aaPredicted RBP17.23■□□□□ 0.35
EFNB1-201ENST00000204961 CHD2O14647 1828 aaKnown RBP17.23■□□□□ 0.35
EFNB1-201ENST00000204961 MST1RQ04912 1400 aa17.23■□□□□ 0.35
EFNB1-201ENST00000204961 A0A087X0B3 334 aa17.23■□□□□ 0.35
EFNB1-201ENST00000204961 ABL1P00519 1130 aa17.23■□□□□ 0.35
EFNB1-201ENST00000204961 WWC2Q6AWC2 1192 aa17.23■□□□□ 0.35
EFNB1-201ENST00000204961 MAP3K14Q99558 947 aa17.23■□□□□ 0.35
EFNB1-201ENST00000204961 ZNF446Q9NWS9 450 aa17.23■□□□□ 0.35
EFNB1-201ENST00000204961 ERO1AQ96HE7 468 aa17.23■□□□□ 0.35
EFNB1-201ENST00000204961 PHACTR2O75167 634 aa17.22■□□□□ 0.35
EFNB1-201ENST00000204961 ETF1P62495 437 aaKnown RBP17.22■□□□□ 0.35
EFNB1-201ENST00000204961 PPARAQ07869 468 aa17.22■□□□□ 0.35
EFNB1-201ENST00000204961 IFIT1BQ5T764 474 aaKnown RBP17.22■□□□□ 0.35
EFNB1-201ENST00000204961 PPP2R2CQ9Y2T4 447 aa17.22■□□□□ 0.35
EFNB1-201ENST00000204961 TNS3Q68CZ2 1445 aa17.22■□□□□ 0.35
EFNB1-201ENST00000204961 CAMTA1Q9Y6Y1 1673 aa17.22■□□□□ 0.35
EFNB1-201ENST00000204961 RHOXF2BP0C7M4 288 aa17.21■□□□□ 0.35
EFNB1-201ENST00000204961 KRT222Q8N1A0 295 aa17.21■□□□□ 0.35
EFNB1-201ENST00000204961 RHOXF2Q9BQY4 288 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms