RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 MAP4K1Q92918 833 aa13.73□□□□□ -0.21
TSPAN9-201ENST00000011898 LRRC37A3O60309 1634 aa13.73□□□□□ -0.21
TSPAN9-201ENST00000011898 CYP7A1P22680 504 aa13.73□□□□□ -0.21
TSPAN9-201ENST00000011898 MAATS1Q7Z4T9 603 aa13.73□□□□□ -0.21
TSPAN9-201ENST00000011898 MICAL1Q8TDZ2 1067 aa13.73□□□□□ -0.21
TSPAN9-201ENST00000011898 CDC5LQ99459 802 aaKnown RBP13.73□□□□□ -0.21
TSPAN9-201ENST00000011898 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.73□□□□□ -0.21
TSPAN9-201ENST00000011898 ESR2Q92731 530 aa13.73□□□□□ -0.21
TSPAN9-201ENST00000011898 PYCARDQ9ULZ3 195 aa13.73□□□□□ -0.21
TSPAN9-201ENST00000011898 TSPY2A6NKD2 308 aa13.73□□□□□ -0.21
TSPAN9-201ENST00000011898 ZPR1O75312 459 aa13.73□□□□□ -0.21
TSPAN9-201ENST00000011898 NR1I2O75469 434 aa13.73□□□□□ -0.21
TSPAN9-201ENST00000011898 UBA7P41226 1012 aa13.73□□□□□ -0.21
TSPAN9-201ENST00000011898 HLTFQ14527 1009 aaKnown RBP eCLIP13.73□□□□□ -0.21
TSPAN9-201ENST00000011898 FRMD3A2A2Y4 597 aa13.72□□□□□ -0.21
TSPAN9-201ENST00000011898 ZNF444Q8N0Y2 327 aaPredicted RBP13.72□□□□□ -0.21
TSPAN9-201ENST00000011898 ATG3Q9NT62 314 aa13.72□□□□□ -0.21
TSPAN9-201ENST00000011898 MKRN1Q9UHC7 482 aaKnown RBP13.72□□□□□ -0.21
TSPAN9-201ENST00000011898 ANKRD65E5RJM6 399 aa13.72□□□□□ -0.21
TSPAN9-201ENST00000011898 IRS4O14654 1257 aaPredicted RBP13.72□□□□□ -0.21
TSPAN9-201ENST00000011898 MYCNP04198 464 aaPredicted RBP13.72□□□□□ -0.21
TSPAN9-201ENST00000011898 KARSQ15046 597 aaKnown RBP13.72□□□□□ -0.21
TSPAN9-201ENST00000011898 POTEDQ86YR6 584 aa13.72□□□□□ -0.21
TSPAN9-201ENST00000011898 FAM76AQ8TAV0 307 aa13.72□□□□□ -0.21
TSPAN9-201ENST00000011898 GOLGA5Q8TBA6 731 aa13.72□□□□□ -0.21
TSPAN9-201ENST00000011898 RAD51AP2Q09MP3 1159 aa13.72□□□□□ -0.21
TSPAN9-201ENST00000011898 NAA16Q6N069 864 aaPredicted RBP13.72□□□□□ -0.21
TSPAN9-201ENST00000011898 AFAP1L1Q8TED9 768 aa13.72□□□□□ -0.21
TSPAN9-201ENST00000011898 YEATS4O95619 227 aa13.71□□□□□ -0.21
TSPAN9-201ENST00000011898 TUBB4AP04350 444 aa13.71□□□□□ -0.21
TSPAN9-201ENST00000011898 IFFO1Q0D2I5 559 aa13.71□□□□□ -0.21
TSPAN9-201ENST00000011898 MRC1P22897 1456 aa13.71□□□□□ -0.21
TSPAN9-201ENST00000011898 PAFAH1B1P43034 410 aa13.71□□□□□ -0.21
TSPAN9-201ENST00000011898 CEP112Q8N8E3 955 aa13.71□□□□□ -0.21
TSPAN9-201ENST00000011898 APPBP2Q92624 585 aa13.71□□□□□ -0.21
TSPAN9-201ENST00000011898 XAGE2Q96GT9 111 aa13.71□□□□□ -0.21
TSPAN9-201ENST00000011898 B4E1Z4 1266 aa13.71□□□□□ -0.22
TSPAN9-201ENST00000011898 GPAA1O43292 621 aa13.71□□□□□ -0.22
TSPAN9-201ENST00000011898 SLC4A8Q2Y0W8 1093 aa13.71□□□□□ -0.22
TSPAN9-201ENST00000011898 ANO1Q5XXA6 986 aa13.71□□□□□ -0.22
TSPAN9-201ENST00000011898 DNAJC10Q8IXB1 793 aa13.71□□□□□ -0.22
TSPAN9-201ENST00000011898 SCN11AQ9UI33 1791 aa13.71□□□□□ -0.22
TSPAN9-201ENST00000011898 TRIM75PA6NK02 468 aa13.71□□□□□ -0.22
TSPAN9-201ENST00000011898 SPA17Q15506 151 aa13.71□□□□□ -0.22
TSPAN9-201ENST00000011898 VEZTQ9HBM0 779 aa13.71□□□□□ -0.22
TSPAN9-201ENST00000011898 ZNF287Q9HBT7 754 aa13.71□□□□□ -0.22
TSPAN9-201ENST00000011898 TMEM51Q9NW97 253 aa13.71□□□□□ -0.22
TSPAN9-201ENST00000011898 TLR7Q9NYK1 1049 aaKnown RBP13.71□□□□□ -0.22
TSPAN9-201ENST00000011898 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.7□□□□□ -0.22
TSPAN9-201ENST00000011898 MYL5Q02045 173 aa13.7□□□□□ -0.22
TSPAN9-201ENST00000011898 CCDC152Q4G0S7 254 aa13.7□□□□□ -0.22
TSPAN9-201ENST00000011898 MIGA1Q8NAN2 632 aa13.7□□□□□ -0.22
TSPAN9-201ENST00000011898 DHX58Q96C10 678 aa13.7□□□□□ -0.22
TSPAN9-201ENST00000011898 PALLDQ8WX93 1383 aa13.7□□□□□ -0.22
TSPAN9-201ENST00000011898 E7EWF7 191 aa13.7□□□□□ -0.22
TSPAN9-201ENST00000011898 TAF5LO75529 589 aa13.7□□□□□ -0.22
TSPAN9-201ENST00000011898 MAGEB6Q8N7X4 407 aa13.7□□□□□ -0.22
TSPAN9-201ENST00000011898 UTP14AQ9BVJ6 771 aaKnown RBP13.7□□□□□ -0.22
TSPAN9-201ENST00000011898 ANKIB1Q9P2G1 1089 aa13.7□□□□□ -0.22
TSPAN9-201ENST00000011898 ANGEL1Q9UNK9 670 aaKnown RBP13.7□□□□□ -0.22
TSPAN9-201ENST00000011898 CTDP1Q9Y5B0 961 aaPredicted RBP13.7□□□□□ -0.22
TSPAN9-201ENST00000011898 CAPN7Q9Y6W3 813 aa13.7□□□□□ -0.22
TSPAN9-201ENST00000011898 BCL9O00512 1426 aa13.7□□□□□ -0.22
TSPAN9-201ENST00000011898 HSF2BPO75031 334 aa13.7□□□□□ -0.22
TSPAN9-201ENST00000011898 BIRC2Q13490 618 aa13.7□□□□□ -0.22
TSPAN9-201ENST00000011898 IFIT1BQ5T764 474 aaKnown RBP13.7□□□□□ -0.22
TSPAN9-201ENST00000011898 PI4K2BQ8TCG2 481 aa13.7□□□□□ -0.22
TSPAN9-201ENST00000011898 USP28Q96RU2 1077 aa13.7□□□□□ -0.22
TSPAN9-201ENST00000011898 SEC63Q9UGP8 760 aaKnown RBP13.7□□□□□ -0.22
TSPAN9-201ENST00000011898 PRAMEF22A3QJZ6 481 aa13.69□□□□□ -0.22
TSPAN9-201ENST00000011898 KIF5BP33176 963 aa13.69□□□□□ -0.22
TSPAN9-201ENST00000011898 ZKSCAN3Q9BRR0 538 aa13.69□□□□□ -0.22
TSPAN9-201ENST00000011898 LOC102724428A0A0B4J2F2 783 aa13.69□□□□□ -0.22
TSPAN9-201ENST00000011898 ZNF202O95125 648 aa13.69□□□□□ -0.22
TSPAN9-201ENST00000011898 STX17P56962 302 aa13.69□□□□□ -0.22
TSPAN9-201ENST00000011898 SIK1P57059 783 aa13.69□□□□□ -0.22
TSPAN9-201ENST00000011898 FKBP15Q5T1M5 1219 aa13.69□□□□□ -0.22
TSPAN9-201ENST00000011898 FAM182BQ5T319 152 aa13.69□□□□□ -0.22
TSPAN9-201ENST00000011898 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.69□□□□□ -0.22
TSPAN9-201ENST00000011898 SETSIPP0DME0 302 aa13.69□□□□□ -0.22
TSPAN9-201ENST00000011898 PDE4BQ07343 736 aa13.69□□□□□ -0.22
TSPAN9-201ENST00000011898 LZTFL1Q9NQ48 299 aa13.69□□□□□ -0.22
TSPAN9-201ENST00000011898 SPATS2LQ9NUQ6 558 aaKnown RBP13.69□□□□□ -0.22
TSPAN9-201ENST00000011898 DBNLQ9UJU6 430 aaKnown RBP13.69□□□□□ -0.22
TSPAN9-201ENST00000011898 STX8Q9UNK0 236 aa13.69□□□□□ -0.22
TSPAN9-201ENST00000011898 CEP83Q9Y592 693 aa13.69□□□□□ -0.22
TSPAN9-201ENST00000011898 LARGE1O95461 756 aa13.68□□□□□ -0.22
TSPAN9-201ENST00000011898 RBBP5Q15291 538 aaKnown RBP13.68□□□□□ -0.22
TSPAN9-201ENST00000011898 SPECC1LQ69YQ0 1117 aa13.68□□□□□ -0.22
TSPAN9-201ENST00000011898 DZIP3Q86Y13 1208 aaKnown RBP13.68□□□□□ -0.22
TSPAN9-201ENST00000011898 KRI1Q8N9T8 703 aaKnown RBP13.68□□□□□ -0.22
TSPAN9-201ENST00000011898 DSCC1Q9BVC3 393 aa13.68□□□□□ -0.22
TSPAN9-201ENST00000011898 SLC24A3Q9HC58 644 aa13.68□□□□□ -0.22
TSPAN9-201ENST00000011898 JADE2Q9NQC1 790 aa13.68□□□□□ -0.22
TSPAN9-201ENST00000011898 TCP11L1Q9NUJ3 509 aa13.68□□□□□ -0.22
TSPAN9-201ENST00000011898 WDHD1O75717 1129 aaPredicted RBP13.68□□□□□ -0.22
TSPAN9-201ENST00000011898 RRAGBQ5VZM2 374 aa13.68□□□□□ -0.22
TSPAN9-201ENST00000011898 NCAPGQ9BPX3 1015 aa13.68□□□□□ -0.22
TSPAN9-201ENST00000011898 COPRSQ9NQ92 184 aa13.68□□□□□ -0.22
TSPAN9-201ENST00000011898 CCNL1Q9UK58 526 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms