RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Ero1bQ8R2E9 467 aa16.41■□□□□ 0.22
Ercc1-203ENSMUST00000160369 Cdk8Q8R3L8 464 aa16.41■□□□□ 0.22
Ercc1-203ENSMUST00000160369 Acot3Q9QYR7 432 aa16.41■□□□□ 0.22
Ercc1-203ENSMUST00000160369 Zdbf2Q5SS00 2493 aaKnown RBP16.41■□□□□ 0.22
Ercc1-203ENSMUST00000160369 Usp31E9Q6Y8 1344 aa16.41■□□□□ 0.22
Ercc1-203ENSMUST00000160369 Gm42688A0A0R3P9D1 673 aa16.4■□□□□ 0.22
Ercc1-203ENSMUST00000160369 Slc1a4O35874 532 aa16.4■□□□□ 0.22
Ercc1-203ENSMUST00000160369 Qrich1Q3UA37 777 aa16.4■□□□□ 0.22
Ercc1-203ENSMUST00000160369 Sv2cQ69ZS6 727 aa16.4■□□□□ 0.22
Ercc1-203ENSMUST00000160369 Ift74Q8BKE9 600 aa16.4■□□□□ 0.22
Ercc1-203ENSMUST00000160369 Ccdc142Q8CAI1 738 aa16.4■□□□□ 0.22
Ercc1-203ENSMUST00000160369 Rbm28Q8CGC6 750 aaKnown RBP16.4■□□□□ 0.22
Ercc1-203ENSMUST00000160369 Sirt2Q8VDQ8 389 aa16.4■□□□□ 0.22
Ercc1-203ENSMUST00000160369 Dynll2Q9D0M5 89 aa16.4■□□□□ 0.22
Ercc1-203ENSMUST00000160369 Btn2a2A4QPC6 514 aa16.39■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Mmp10O55123 476 aa16.39■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Cd3dP04235 173 aa16.39■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Pde11aP0C1Q2 933 aa16.39■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Atoh1P48985 351 aa16.39■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Rnf20Q5DTM8 973 aa16.39■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Foxn1Q61575 648 aa16.39■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Ifit2Q64112 472 aa16.39■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Ubxn10Q8BG34 277 aa16.39■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Eaf2Q91ZD6 262 aa16.39■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Rfc4Q99J62 364 aa16.39■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Krt84Q99M73 603 aa16.39■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Frmpd4A2AFR3 1320 aa16.39■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Ppp4r2Q0VGB7 417 aa16.38■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Q3TYL0 343 aa16.38■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Spty2d1Q68FG3 682 aa16.38■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Fam196bQ6GQV1 535 aa16.38■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Garem2Q6PAJ3 880 aa16.38■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Scfd2Q8BTY8 684 aa16.38■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Ppp1r11Q8K1L5 131 aa16.38■□□□□ 0.21
Ercc1-203ENSMUST00000160369 SmapQ9R0P4 181 aaKnown RBP16.38■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Bub1bQ9Z1S0 1052 aa16.38■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Plcg1Q62077 1302 aa16.38■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Rbm8a2A0A0N4SUH6 174 aa16.37■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Zmynd8A2A484 1235 aaKnown RBP16.37■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Trim30dE9PWL0 497 aa16.37■□□□□ 0.21
Ercc1-203ENSMUST00000160369 PcQ05920 1178 aa16.37■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Spryd7Q3TFQ1 196 aa16.37■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Cnnm2Q3TWN3 875 aa16.37■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Otud5Q3U2S4 566 aa16.37■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Gprin1Q3UNH4 932 aa16.37■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Hand2Q61039 217 aa16.37■□□□□ 0.21
Ercc1-203ENSMUST00000160369 VwdeQ6DFV8 926 aa16.37■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Dcaf15Q6PFH3 600 aa16.37■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Vmn1r199Q8R280 367 aa16.37■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Trex1Q91XB0 314 aa16.37■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Ndufv1Q91YT0 464 aa16.37■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Tomm22Q9CPQ3 142 aa16.37■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Rbm8aQ9CWZ3 174 aa16.37■□□□□ 0.21
Ercc1-203ENSMUST00000160369 CsadQ9DBE0 493 aa16.37■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Tjap1Q9DCD5 539 aa16.37■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Ak2Q9WTP6 239 aa16.37■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Pmfbp1Q9WVQ0 1022 aa16.37■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Col11a1Q61245 1804 aa16.36■□□□□ 0.21
Ercc1-203ENSMUST00000160369 LtbrP50284 415 aa16.36■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Eya3P97480 510 aa16.36■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Aak1Q3UHJ0 959 aa16.36■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Acap3Q6NXL5 833 aa16.36■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Usp44Q8C2S0 711 aa16.36■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Nup133Q8R0G9 1155 aa16.36■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Cnot6lQ8VEG6 555 aa16.36■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Bap1Q99PU7 728 aa16.36■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Rnf181Q9CY62 165 aa16.36■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Rad50P70388 1312 aa16.36■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Ltbp2O08999 1813 aa16.35■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Gm44503E9PYU5 387 aa16.35■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Casp12O08736 419 aa16.35■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Prl7a2O54831 253 aa16.35■□□□□ 0.21
Ercc1-203ENSMUST00000160369 PtpraP18052 829 aa16.35■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Evi5P97366 809 aa16.35■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Dpp8Q80YA7 892 aa16.35■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Dnaaf4Q8R368 420 aa16.35■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Snap47Q8R570 413 aa16.35■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Fbxo33Q8VE08 562 aa16.35■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Hmg20bQ9Z104 317 aa16.35■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Usp42B2RQC2 1324 aaKnown RBP16.35■□□□□ 0.21
Ercc1-203ENSMUST00000160369 FAM186AQ9D9R9 1790 aa16.34■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Prpmp5E9PXN1 296 aa16.34■□□□□ 0.21
Ercc1-203ENSMUST00000160369 MyrflQ3UN70 904 aa16.34■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Brip1Q5SXJ3 1174 aa16.34■□□□□ 0.21
Ercc1-203ENSMUST00000160369 WaplQ65Z40 1200 aaKnown RBP16.34■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Lca5lQ8C0X0 741 aa16.34■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Pcdhb22Q91XZ8 794 aa16.34■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Zbtb43Q9DAI4 467 aa16.34■□□□□ 0.21
Ercc1-203ENSMUST00000160369 Pus7B7ZNL8 666 aaKnown RBP16.33■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Zscan18E9PUD6 809 aa16.33■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Has3O08650 554 aa16.33■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Arl14Q3SXC5 192 aa16.33■□□□□ 0.2
Ercc1-203ENSMUST00000160369 RubcnlQ3TD16 648 aa16.33■□□□□ 0.2
Ercc1-203ENSMUST00000160369 ErmnQ5EBJ4 281 aa16.33■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Ppp1r1bQ60829 194 aa16.33■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Ppip5k2Q6ZQB6 1129 aa16.33■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Podxl2Q8CAE9 603 aa16.33■□□□□ 0.2
Ercc1-203ENSMUST00000160369 PpatQ8CIH9 517 aa16.33■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Mlh1Q9JK91 760 aa16.33■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Ugt1a5B2RT14 529 aa16.32■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms