RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Gm21858A0A087WQ24 222 aa18.32■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Gimap9G3X987 291 aa18.32■□□□□ 0.52
Ubr3-202ENSMUST00000112251 SsbP32067 415 aaKnown RBP18.32■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Nr1h4Q60641 488 aa18.32■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Strn3Q9ERG2 796 aa18.32■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Sdf4Q61112 361 aa18.32■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Sh2b1Q91ZM2 756 aa18.32■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Zkscan4Q5SZT6 480 aa18.32■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Tekt3Q6X6Z7 490 aa18.32■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Ankrd13dQ6PD24 605 aa18.31■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Tnpo2Q99LG2 887 aaKnown RBP18.31■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Arhgap42B2RQE8 841 aa18.31■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Slc51bQ80WK2 128 aa18.31■□□□□ 0.52
Ubr3-202ENSMUST00000112251 EsrrgP62509 458 aa18.31■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Nucks1Q80XU3 234 aaKnown RBP18.31■□□□□ 0.52
Ubr3-202ENSMUST00000112251 SybuQ8BHS8 665 aa18.31■□□□□ 0.52
Ubr3-202ENSMUST00000112251 ParnQ8VDG3 624 aa18.31■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Arhgef6Q8K4I3 771 aa18.31■□□□□ 0.52
Ubr3-202ENSMUST00000112251 HelbQ6NVF4 1074 aa18.31■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Trim12cD3Z3L3 497 aa18.31■□□□□ 0.52
Ubr3-202ENSMUST00000112251 G3bp2P97379 482 aaKnown RBP18.31■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Lrrc36Q3V0M2 755 aa18.31■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Snx19Q6P4T1 997 aa18.31■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Trak2Q6P9N8 913 aa18.31■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Mtrf1lQ8BJU9 373 aa18.31■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Ppp1r12aQ9DBR7 1029 aaKnown RBP18.31■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Frat1P70339 274 aa18.3■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Igflr1Q3U4N7 345 aa18.3■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Arhgap30Q640N3 1101 aa18.3■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Ccdc28aQ8CEI3 192 aa18.3■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Ccdc65Q8VHI7 493 aa18.3■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Slc12a1P55014 1095 aa18.3■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Ifit2Q64112 472 aa18.3■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Atxn3Q9CVD2 355 aa18.3■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Cd72P21855 354 aa18.3■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Pfdn6Q03958 127 aa18.3■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Rtel1Q0VGM9 1203 aa18.3■□□□□ 0.52
Ubr3-202ENSMUST00000112251 HarsQ61035 509 aa18.3■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Sdccag3A2AIW0 432 aa18.3■□□□□ 0.52
Ubr3-202ENSMUST00000112251 4930548H24RikQ9D496 437 aa18.3■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Ppfia1B2RXQ2 1266 aa18.3■□□□□ 0.52
Ubr3-202ENSMUST00000112251 F2rP30558 430 aa18.3■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Ccdc68Q8BVC4 333 aa18.3■□□□□ 0.52
Ubr3-202ENSMUST00000112251 E4f1Q8CCE9 783 aa18.3■□□□□ 0.52
Ubr3-202ENSMUST00000112251 ArhgdiaQ99PT1 204 aaKnown RBP18.3■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Gm5624F6ZZG8 207 aa18.3■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Cfap36Q8C6E0 343 aa18.3■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Fam133bQ9CVI2 245 aaKnown RBP18.3■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Adi1Q99JT9 179 aa18.3■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Acnat2Q8BGG9 420 aa18.29■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Ccnt1Q9QWV9 724 aaKnown RBP18.29■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Kif2cQ922S8 721 aa18.29■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Oas2E9Q9A9 742 aa18.29■□□□□ 0.52
Ubr3-202ENSMUST00000112251 IntuQ059U7 942 aa18.29■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Ccdc85bQ6PDY0 202 aa18.29■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Kcnh5Q920E3 988 aa18.29■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Kank1E9Q238 1360 aa18.29■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Micall2Q3TN34 1009 aa18.29■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Cnnm4Q69ZF7 771 aa18.29■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Brd2Q7JJ13 798 aaKnown RBP18.29■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Ccdc121E9Q6D3 323 aa18.29■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Cc2d2aQ8CFW7 1633 aa18.29■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Kif6E9PX57 802 aa18.29■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Flot2Q60634 428 aaKnown RBP18.29■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Klhl31Q8BWA5 634 aa18.29■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Abt1Q9QYL7 269 aaKnown RBP18.29■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Rbbp8nlA2ABX0 614 aa18.28■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Retreg2Q6NS82 541 aa18.28■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Ahi1Q8K3E5 1047 aa18.28■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Abtb1Q99LJ2 478 aa18.28■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Nip7Q9CXK8 180 aaKnown RBP18.28■□□□□ 0.52
Ubr3-202ENSMUST00000112251 C130026I21RikQ8C898 291 aa18.28■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Spats2Q8K1N4 545 aaKnown RBP18.28■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Utp11Q9CZJ1 253 aaKnown RBP18.28■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Pacsin2Q9WVE8 486 aaKnown RBP18.28■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Cyp2ab1S4R196 498 aa18.28■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Mroh9G5E8L9 891 aa18.28■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Slc4a2P13808 1237 aaKnown RBP18.28■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Dclk2Q6PGN3 756 aa18.28■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Pak2Q8CIN4 524 aa18.28■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Ror2Q9Z138 944 aa18.28■□□□□ 0.52
Ubr3-202ENSMUST00000112251 CaluO35887 315 aa18.28■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Serpinb6Q60854 378 aa18.28■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Klhl34A2AI76 644 aa18.28■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Arhgef2Q60875 985 aa18.27■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Casp1P29452 402 aa18.27■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Usp8Q80U87 1080 aa18.27■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Tsr1Q5SWD9 803 aa18.27■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Tubgcp2Q921G8 905 aa18.27■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Elf2Q9JHC9 593 aa18.27■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Nfil3O08750 462 aa18.27■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Ap1b1O35643 943 aaKnown RBP18.27■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Wbp4Q61048 376 aa18.27■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Eps15l1Q60902 907 aaKnown RBP18.27■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Rint1Q8BZ36 792 aa18.27■□□□□ 0.52
Ubr3-202ENSMUST00000112251 Mmrn2A6H6E2 943 aa18.27■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Pik3caP42337 1068 aa18.27■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Dync1i2O88487 612 aaKnown RBP18.27■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Wwc1Q5SXA9 1104 aa18.26■□□□□ 0.51
Ubr3-202ENSMUST00000112251 Nacc1Q7TSZ8 514 aa18.26■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms