RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Znfx1Q8R151 1909 aaKnown RBP10.27□□□□□ -0.76
Scn8a-202ENSMUST00000096198 Ube4aE9Q735 1028 aa10.27□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Gm3138K7N754 218 aa10.27□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Bace1P56818 501 aa10.27□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Nhlh1Q02576 133 aa10.27□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Satb1Q60611 764 aa10.27□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Vps72Q62481 368 aa10.27□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Dalrd3Q6PJN8 538 aa10.27□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Adnp2Q8CHC8 1165 aaKnown RBP10.27□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Tmem119Q8R138 280 aa10.27□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Txnrd3Q99MD6 652 aa10.27□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Tmem39aQ9CYC3 486 aa10.27□□□□□ -0.77
Scn8a-202ENSMUST00000096198 PrelpQ9JK53 378 aa10.27□□□□□ -0.77
Scn8a-202ENSMUST00000096198 FryE9Q8I9 3020 aa10.27□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Spag17Q5S003 2320 aa10.27□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Itpr1P11881 2749 aa10.26□□□□□ -0.77
Scn8a-202ENSMUST00000096198 ThbdP15306 577 aa10.26□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Fmr1P35922 614 aaKnown RBP10.26□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Grin2cQ01098 1239 aa10.26□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Ttc9Q3V038 219 aa10.26□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Ppfibp1Q8C8U0 969 aaKnown RBP10.26□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Phf20l1Q8CCJ9 1013 aa10.26□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Rab30Q923S9 203 aa10.26□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Bicc1Q99MQ1 977 aaKnown RBP10.26□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Foxp4Q9DBY0 795 aaKnown RBP10.26□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Osbpl5Q9ER64 874 aa10.26□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Ripk4Q9ERK0 786 aa10.26□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Pidd1Q9ERV7 915 aa10.26□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Maged1Q9QYH6 775 aaKnown RBP10.26□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Rnf123Q5XPI3 1314 aa10.26□□□□□ -0.77
Scn8a-202ENSMUST00000096198 DgkhD3YXJ0 1156 aa10.25□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Nr5a1P33242 462 aa10.25□□□□□ -0.77
Scn8a-202ENSMUST00000096198 GclcP97494 637 aa10.25□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Tpd52Q62393 224 aa10.25□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Dpp9Q8BVG4 862 aa10.25□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Gbp7Q91Z40 638 aa10.25□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Cacna1fQ9JIS7 1985 aa10.25□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Obsl1D3YYU8 1804 aaKnown RBP10.24□□□□□ -0.77
Scn8a-202ENSMUST00000096198 DmdP11531 3678 aa10.24□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Supt3B0QZW4 406 aa10.24□□□□□ -0.77
Scn8a-202ENSMUST00000096198 AoahO35298 574 aa10.24□□□□□ -0.77
Scn8a-202ENSMUST00000096198 PtpraP18052 829 aa10.24□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Cd72P21855 354 aa10.24□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Morf4l1P60762 362 aa10.24□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Tff2Q03404 129 aa10.24□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Washc4Q3UMB9 1173 aa10.24□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Sin3aQ60520 1274 aaKnown RBP10.24□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Fkbp5Q64378 456 aa10.24□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Dync1li2Q6PDL0 492 aaKnown RBP10.24□□□□□ -0.77
Scn8a-202ENSMUST00000096198 AbraQ8BUZ1 375 aa10.24□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Fam126bQ8C729 530 aa10.24□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Cwc25Q9DBF7 416 aa10.24□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Fkbp1bQ9Z2I2 108 aa10.24□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Col4a3Q9QZS0 1669 aa10.24□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Baz2bA2AUY4 2123 aa10.24□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Ect2lA0A140LIP2 953 aa10.23□□□□□ -0.77
Scn8a-202ENSMUST00000096198 FlgP11088 336 aa10.23□□□□□ -0.77
Scn8a-202ENSMUST00000096198 DctP29812 517 aa10.23□□□□□ -0.77
Scn8a-202ENSMUST00000096198 GlrbP48168 496 aa10.23□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Eif4g2Q62448 906 aaKnown RBP10.23□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Garem2Q6PAJ3 880 aa10.23□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Gpc2Q8BKV1 579 aa10.23□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Btbd7Q8CFE5 1130 aa10.23□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Mrpl58Q8R035 206 aa10.23□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Atxn7Q8R4I1 867 aa10.23□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Ngly1Q9JI78 651 aa10.23□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Nup98Q6PFD9 1816 aaKnown RBP10.23□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Atrnl1Q6A051 1378 aa10.23□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Chd5A2A8L1 1946 aa10.23□□□□□ -0.77
Scn8a-202ENSMUST00000096198 AtmQ62388 3066 aa10.22□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Flvcr1B2RXV4 560 aa10.22□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Ca3P16015 260 aa10.22□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Tmem143Q8VD26 458 aa10.22□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Ca9Q8VHB5 437 aa10.22□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Ankrd54Q91WK7 299 aa10.22□□□□□ -0.77
Scn8a-202ENSMUST00000096198 AtrxQ61687 2476 aaKnown RBP10.22□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Plxnb3Q9QY40 1902 aa10.21□□□□□ -0.77
Scn8a-202ENSMUST00000096198 TxnP10639 105 aaKnown RBP10.21□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Lamp1P11438 406 aaKnown RBP10.21□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Snrpa1P57784 255 aaKnown RBP10.21□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Kctd3Q8BFX3 815 aa10.21□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Dis3lQ8C0S1 1053 aa10.21□□□□□ -0.77
Scn8a-202ENSMUST00000096198 MafaQ8CF90 359 aa10.21□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Etv3Q8R4Z4 513 aa10.21□□□□□ -0.77
Scn8a-202ENSMUST00000096198 HibadhQ99L13 335 aaKnown RBP10.21□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Fam213aQ9CYH2 218 aa10.21□□□□□ -0.77
Scn8a-202ENSMUST00000096198 RabggtaQ9JHK4 567 aa10.21□□□□□ -0.77
Scn8a-202ENSMUST00000096198 Arfgef1G3X9K3 1846 aaKnown RBP10.21□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Mms22lB1AUR6 1238 aa10.2□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Nploc4P60670 608 aa10.2□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Zfp953Q3UPV7 304 aa10.2□□□□□ -0.78
Scn8a-202ENSMUST00000096198 G2e3Q5RJY2 716 aa10.2□□□□□ -0.78
Scn8a-202ENSMUST00000096198 PsapQ61207 557 aaKnown RBP10.2□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Stxbp2Q64324 593 aa10.2□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Senp6Q6P7W0 1132 aa10.2□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Pitpnm2Q6ZPQ6 1335 aa10.2□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Susd6Q8BGE4 302 aa10.2□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Pcdhb5Q91XZ5 792 aa10.2□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Ctu1Q99J10 420 aa10.2□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Chd7A2AJK6 2986 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms