RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Gcc2Q8CHG3 1679 aa11.27□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Fermt1P59113 677 aa11.27□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Lrrd1Q8C0R9 853 aa11.27□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Ppp1r3fQ9JIG4 799 aa11.27□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Aox2Q5SGK3 1345 aa11.27□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Iws1Q8C1D8 766 aa11.27□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Apol10aQ8CCA5 318 aa11.27□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Stx17Q9D0I4 301 aa11.27□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Mrps25Q9D125 171 aaKnown RBP11.27□□□□□ -0.61
Ubr1-201ENSMUST00000028728 NntQ61941 1086 aaKnown RBP11.27□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Nucks1Q80XU3 234 aaKnown RBP11.27□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Ccdc13D3YV10 709 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Gm6121L7MUF1 212 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Tubgcp2Q921G8 905 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 NsmfQ99NF2 532 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Lrrc74aA0A1Y7VMD6 494 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Sclt1G5E861 688 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Eya2O08575 532 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 RcvrnP34057 202 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 PcQ05920 1178 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Ccdc110Q3V125 848 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 4921530L21RikQ9CQ47 274 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Plxnc1Q9QZC2 1574 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Hmgb2P30681 210 aaKnown RBP11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Chl1P70232 1209 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Neurog2P70447 263 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 MycbpapQ5SUV2 932 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Ptcd1Q8C2E4 695 aaKnown RBP11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Pcdha7Q91Y13 937 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Slf2Q6P9P0 1278 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 SpopQ6ZWS8 374 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Spata16Q8C636 571 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Gdap1l1Q8VE33 370 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Rapgef1Q3UHC1 1224 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 VmacQ8BP01 174 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Rbm17Q8JZX4 405 aaKnown RBP11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Ttc5Q99LG4 440 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 CutaQ9CQ89 177 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Dmrtc1Q9D9R7 182 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Stat2Q9WVL2 923 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Snapc4Q8BP86 1333 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Spocd1B1ASB6 936 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 VeztQ3ZK22 780 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Jade3Q6IE82 823 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Stag1Q9D3E6 1258 aa11.26□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Enc1O35709 589 aa11.25□□□□□ -0.61
Ubr1-201ENSMUST00000028728 TchpQ3TVW5 497 aa11.25□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Prune1Q8BIW1 454 aa11.25□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Gtpbp10Q8K013 366 aa11.25□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Lrrc7Q80TE7 1490 aa11.25□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Ccdc189Q6NZQ0 333 aa11.25□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Ccdc175E9PVB3 822 aa11.25□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Akr1c19G3X9Y6 323 aa11.25□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Ror2Q9Z138 944 aa11.25□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Prl3d2F6R3P9 224 aa11.25□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Brpf3B2KF05 1204 aaKnown RBP11.25□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Prl7a2O54831 253 aa11.25□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Zfyve27Q3TXX3 415 aa11.25□□□□□ -0.61
Ubr1-201ENSMUST00000028728 LpxnQ99N69 386 aa11.25□□□□□ -0.61
Ubr1-201ENSMUST00000028728 RarsQ9D0I9 660 aaKnown RBP11.25□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Serpinb12Q9D7P9 423 aa11.25□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Rgs12Q8CGE9 1381 aa11.25□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Kcnk16G5E845 292 aa11.25□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Kifap3P70188 793 aa11.25□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Dab2P98078 766 aa11.25□□□□□ -0.61
Ubr1-201ENSMUST00000028728 SpertQ32MG2 446 aa11.25□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Gm5169Q5M8P2 212 aa11.25□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Lmbrd2Q8C561 694 aa11.25□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Tekt3Q6X6Z7 490 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Lrrc2Q8VDB8 371 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 MefvQ9JJ26 767 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Cep85lA0A1W2P884 806 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Nlrp4cQ3TKR3 982 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Znf532Q6NXK2 1036 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Spats2lQ91WJ7 558 aaKnown RBP11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Cdca7lQ922M5 438 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Rrbp1Q99PL5 1605 aaKnown RBP11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Cct6aP80317 531 aaKnown RBP11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Nlrp4fQ66X05 959 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 IqceQ6PCQ0 778 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Atad2Q8CDM1 1040 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Foxp1P58462 705 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Tshz2Q68FE9 1030 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Mknk2Q8CDB0 459 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Basp1Q91XV3 226 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Smc6Q924W5 1097 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Zcchc17Q9ESX4 241 aaKnown RBP11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Eif2ak4Q9QZ05 1648 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Ppp1r9aH3BJD6 1292 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Sult6b1P0CC03 303 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Col17a1Q07563 1470 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Gm20425E9Q035 978 aaKnown RBP11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Gm6588E9Q3K0 461 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 TsksO54887 585 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 SrprbP47758 269 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 S100bP50114 92 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Eya1P97767 591 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Nhej1Q3KNJ2 295 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Enox1Q8BHR2 643 aaKnown RBP11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Ccdc113Q8C5T8 377 aa11.24□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 42 ms