RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Znf496Q5SXI5 585 aa13.63□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Clic6Q8BHB9 596 aa13.63□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Kif23E9Q5G3 953 aa13.63□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Leo1Q5XJE5 667 aa13.63□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Ttll4Q80UG8 1193 aa13.63□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Osbpl2Q8BX94 484 aa13.63□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Kdm4cQ8VCD7 1054 aa13.63□□□□□ -0.23
Ctr9-201ENSMUST00000005749 StrbpQ91WM1 672 aaKnown RBP13.63□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Tmod4Q9JLH8 345 aa13.63□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Kcnh3Q9WVJ0 1095 aa13.63□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Cavin1O54724 392 aa13.63□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Kif1bpQ6ZPU9 617 aa13.63□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Ivns1abpQ920Q8 642 aa13.63□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Ankrd1Q9CR42 319 aa13.63□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Syt10Q9R0N4 523 aa13.63□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Gm20425E9Q035 978 aaKnown RBP13.62□□□□□ -0.23
Ctr9-201ENSMUST00000005749 PparaP23204 468 aa13.62□□□□□ -0.23
Ctr9-201ENSMUST00000005749 SrprbP47758 269 aa13.62□□□□□ -0.23
Ctr9-201ENSMUST00000005749 P4ha1Q60715 534 aa13.62□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Igbp1Q61249 340 aa13.62□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Mrpl50Q8VDT9 159 aaKnown RBP13.62□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Fyb2A2A995 729 aa13.62□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Ces1dQ8VCT4 565 aa13.62□□□□□ -0.23
Ctr9-201ENSMUST00000005749 EhhadhQ9DBM2 718 aa13.62□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Uchl5Q9WUP7 329 aa13.62□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Znf526Q8BI66 675 aa13.62□□□□□ -0.23
Ctr9-201ENSMUST00000005749 QarsQ8BML9 775 aa13.62□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Tcp11l1Q8BTG3 509 aa13.62□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Atad2Q8CDM1 1040 aa13.62□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Cyp2j7A0A140T8U1 504 aa13.61□□□□□ -0.23
Ctr9-201ENSMUST00000005749 DohhA0A1Y7VJ29 135 aa13.61□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Krt24A1L317 512 aa13.61□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Flot1O08917 428 aa13.61□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Mcm7Q61881 719 aaKnown RBP13.61□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Tnip1Q9WUU8 647 aa13.61□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Usp42B2RQC2 1324 aaKnown RBP13.61□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Otop3Q80UF9 577 aa13.61□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Plcd1Q8R3B1 756 aa13.61□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Capn12Q9ER56 720 aa13.61□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Prss51A0A286YDY8 319 aa13.61□□□□□ -0.23
Ctr9-201ENSMUST00000005749 PsdQ5DTT2 1024 aa13.61□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Arhgef2Q60875 985 aa13.61□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Ccdc113Q8C5T8 377 aa13.61□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Riox2Q8CD15 465 aa13.61□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Q3UJP5 209 aa13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Gm28047Q3US59 414 aa13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Ppm1mQ8BU27 406 aa13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Stk32bQ9JJX8 414 aa13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Sycp2lA0A0M3U1B0 842 aa13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 TrdnE9Q9K5 693 aa13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 NfixP70257 488 aa13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Gpbp1Q6NXH3 473 aaKnown RBP13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Ano10Q8BH79 659 aa13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Ptrh1Q8BW00 204 aa13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Tbc1d23Q8K0F1 684 aa13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Smtnl1Q99LM3 459 aa13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Rsph10bE9PYQ0 876 aa13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Ifi207E9Q3L4 978 aa13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Epb41l2O70318 988 aaKnown RBP13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Slurp2P0DP59 97 aa13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Ccdc34Q3UI66 367 aa13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Ift88Q61371 824 aa13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Pdia6Q922R8 440 aaKnown RBP13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Tfap4Q9JIZ5 338 aa13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Mtmr7Q9Z2C9 660 aa13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Atp6v0a2P15920 856 aa13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Znf692Q3U381 531 aa13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Tmtc2Q56A06 836 aa13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Ano6Q6P9J9 911 aa13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Rasgrp4Q8BTM9 673 aa13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 HlfQ8BW74 295 aa13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Abcc10Q8R4P9 1501 aa13.6□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Fam186bD3Z420 943 aa13.59□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Snap25P60879 206 aa13.59□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Hvcn1Q3U2S8 269 aa13.59□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Slc27a1Q60714 646 aa13.59□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Defb15Q8R2I5 79 aa13.59□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Phf14Q9D4H9 881 aa13.59□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Col4a3bpQ9EQG9 624 aa13.59□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Dnajc25A2ALW5 357 aa13.59□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Krt9Q6RHW0 743 aa13.59□□□□□ -0.23
Ctr9-201ENSMUST00000005749 AbraQ8BUZ1 375 aa13.59□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Xrn1P97789 1719 aaKnown RBP13.59□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Mageb2A2AHM0 380 aa13.59□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Ccdc78D3Z5T1 437 aa13.59□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Cd3dP04235 173 aa13.59□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Dcaf17Q3TUL7 519 aa13.59□□□□□ -0.23
Ctr9-201ENSMUST00000005749 C87499Q3UX49 493 aa13.59□□□□□ -0.23
Ctr9-201ENSMUST00000005749 IqcgQ80W32 419 aa13.59□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Mb21d2Q8C525 428 aa13.59□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Zfp202Q8C879 641 aa13.59□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Gm11549A0A286YD83 63 aa13.58□□□□□ -0.23
Ctr9-201ENSMUST00000005749 WaslQ91YD9 501 aa13.58□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Tacc2Q9JJG0 1149 aa13.58□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Glra4Q61603 456 aa13.58□□□□□ -0.24
Ctr9-201ENSMUST00000005749 Usp50Q6P8X6 390 aa13.58□□□□□ -0.24
Ctr9-201ENSMUST00000005749 Usp21Q9QZL6 566 aa13.58□□□□□ -0.24
Ctr9-201ENSMUST00000005749 Foxo4Q9WVH3 505 aa13.58□□□□□ -0.24
Ctr9-201ENSMUST00000005749 Slfn1Q9Z0I7 337 aa13.58□□□□□ -0.24
Ctr9-201ENSMUST00000005749 Nmt2O70311 529 aa13.58□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms