RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 LINC00575Q6W349 94 aa1.23□□□□□ -2.21
CCDC7-213ENST00000639290 A0A087WVE0 104 aa1.22□□□□□ -2.21
CCDC7-213ENST00000639290 UMAD1C9J7I0 102 aa1.22□□□□□ -2.21
CCDC7-213ENST00000639290 NCR3O14931 201 aa1.22□□□□□ -2.21
CCDC7-213ENST00000639290 H0YAA0 97 aa1.21□□□□□ -2.22
CCDC7-213ENST00000639290 KRTAP19-7Q3SYF9 63 aa1.21□□□□□ -2.22
CCDC7-213ENST00000639290 PLAC4Q8WY50 150 aa1.21□□□□□ -2.22
CCDC7-213ENST00000639290 LINC00472Q9H8W2 130 aa1.21□□□□□ -2.22
CCDC7-213ENST00000639290 Q6JHZ5 121 aa1.2□□□□□ -2.22
CCDC7-213ENST00000639290 SMIM11BQ8TCY0 68 aa1.2□□□□□ -2.22
CCDC7-213ENST00000639290 ATP5EP2Q5VTU8 51 aa1.2□□□□□ -2.22
CCDC7-213ENST00000639290 PHGR1C9JFL3 82 aa1.19□□□□□ -2.22
CCDC7-213ENST00000639290 KRTAP12-1P59990 96 aa1.19□□□□□ -2.22
CCDC7-213ENST00000639290 Q6ZRX8 168 aa1.19□□□□□ -2.22
CCDC7-213ENST00000639290 H0Y9P7 68 aa1.19□□□□□ -2.22
CCDC7-213ENST00000639290 POLR2KP53803 58 aaKnown RBP1.18□□□□□ -2.22
CCDC7-213ENST00000639290 SPATA8Q6RVD6 105 aa1.18□□□□□ -2.22
CCDC7-213ENST00000639290 TMEM167BQ9NRX6 74 aa1.18□□□□□ -2.22
CCDC7-213ENST00000639290 A0A1B0GUT8 65 aa1.17□□□□□ -2.22
CCDC7-213ENST00000639290 GCHFRP30047 84 aa1.17□□□□□ -2.22
CCDC7-213ENST00000639290 TRBV7-4A0A0J9YYF1 115 aa1.17□□□□□ -2.22
CCDC7-213ENST00000639290 IFI27P40305 119 aaPredicted RBP1.17□□□□□ -2.22
CCDC7-213ENST00000639290 GNGT1P63211 74 aa1.17□□□□□ -2.22
CCDC7-213ENST00000639290 A0A087WXM4 84 aa1.16□□□□□ -2.22
CCDC7-213ENST00000639290 SPINK7P58062 85 aa1.16□□□□□ -2.22
CCDC7-213ENST00000639290 CNFNQ9BYD5 112 aa1.16□□□□□ -2.22
CCDC7-213ENST00000639290 FCER1GP30273 86 aa1.16□□□□□ -2.22
CCDC7-213ENST00000639290 COX8AP10176 69 aa1.15□□□□□ -2.23
CCDC7-213ENST00000639290 WFDC13Q8IUB5 93 aa1.15□□□□□ -2.23
CCDC7-213ENST00000639290 TOMM7Q9P0U1 55 aa1.15□□□□□ -2.23
CCDC7-213ENST00000639290 RPL39LQ96EH5 51 aaKnown RBP1.15□□□□□ -2.23
CCDC7-213ENST00000639290 LCE3DQ9BYE3 92 aa1.14□□□□□ -2.23
CCDC7-213ENST00000639290 NDUFB1O75438 58 aa1.14□□□□□ -2.23
CCDC7-213ENST00000639290 C3orf79P0CE67 100 aa1.13□□□□□ -2.23
CCDC7-213ENST00000639290 LCE1CQ5T751 118 aa1.13□□□□□ -2.23
CCDC7-213ENST00000639290 LCE1BQ5T7P3 118 aa1.13□□□□□ -2.23
CCDC7-213ENST00000639290 K7EQZ3 153 aa1.13□□□□□ -2.23
CCDC7-213ENST00000639290 A0A1B0GU69 56 aa1.12□□□□□ -2.23
CCDC7-213ENST00000639290 MT1LQ93083 61 aa1.1□□□□□ -2.23
CCDC7-213ENST00000639290 ATXN8Q156A1 80 aa1.09□□□□□ -2.23
CCDC7-213ENST00000639290 GNG13Q9P2W3 67 aa1.09□□□□□ -2.23
CCDC7-213ENST00000639290 NREPQ16612 68 aa1.08□□□□□ -2.24
CCDC7-213ENST00000639290 IGLV5-48A0A075B6I7 105 aa1.06□□□□□ -2.24
CCDC7-213ENST00000639290 COX7BP24311 80 aa1.05□□□□□ -2.24
CCDC7-213ENST00000639290 CDKN2A-AS1Q9UH64 79 aa1.05□□□□□ -2.24
CCDC7-213ENST00000639290 RPL39P62891 51 aaKnown RBP1.04□□□□□ -2.24
CCDC7-213ENST00000639290 S4R3F8 94 aa1.03□□□□□ -2.25
CCDC7-213ENST00000639290 KRTAP12-3P60328 96 aa1.02□□□□□ -2.25
CCDC7-213ENST00000639290 SERF2P84101 59 aa1.02□□□□□ -2.25
CCDC7-213ENST00000639290 LINC01549A6NIU2 74 aa1.01□□□□□ -2.25
CCDC7-213ENST00000639290 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
CCDC7-213ENST00000639290 SMIM2Q9BVW6 85 aa1.01□□□□□ -2.25
CCDC7-213ENST00000639290 TP53AIP1Q9HCN2 124 aa1.01□□□□□ -2.25
CCDC7-213ENST00000639290 K7EMI3 77 aa0.99□□□□□ -2.25
CCDC7-213ENST00000639290 KRTAP19-5Q3LI72 72 aa0.99□□□□□ -2.25
CCDC7-213ENST00000639290 UBL5Q9BZL1 73 aa0.99□□□□□ -2.25
CCDC7-213ENST00000639290 C10orf95Q9H7T3 257 aa0.98□□□□□ -2.25
CCDC7-213ENST00000639290 LINC00158P58513 81 aa0.98□□□□□ -2.25
CCDC7-213ENST00000639290 KRTAP6-2Q3LI66 62 aa0.98□□□□□ -2.25
CCDC7-213ENST00000639290 MT1AP04731 61 aa0.97□□□□□ -2.25
CCDC7-213ENST00000639290 IGIPA6NJ69 53 aa0.96□□□□□ -2.26
CCDC7-213ENST00000639290 A0A0D9SG42 100 aa0.95□□□□□ -2.26
CCDC7-213ENST00000639290 DEFB105AQ8NG35 78 aa0.95□□□□□ -2.26
CCDC7-213ENST00000639290 TOMM5Q8N4H5 51 aa0.93□□□□□ -2.26
CCDC7-213ENST00000639290 MRPL34Q9BQ48 92 aaKnown RBP0.93□□□□□ -2.26
CCDC7-213ENST00000639290 MUC19Q7Z5P9 8384 aa0.92□□□□□ -2.26
CCDC7-213ENST00000639290 KRTAP6-1Q3LI64 71 aa0.9□□□□□ -2.27
CCDC7-213ENST00000639290 PLNP26678 52 aa0.84□□□□□ -2.27
CCDC7-213ENST00000639290 KRTAP21-2Q3LI59 83 aa0.83□□□□□ -2.28
CCDC7-213ENST00000639290 M0QZ58 72 aa0.83□□□□□ -2.28
CCDC7-213ENST00000639290 LINC01546A6NGU7 62 aa0.8□□□□□ -2.28
CCDC7-213ENST00000639290 H0YGX0 51 aa0.8□□□□□ -2.28
CCDC7-213ENST00000639290 SMIM27A0A1W2PRY6 76 aa0.78□□□□□ -2.28
CCDC7-213ENST00000639290 LINC00308Q8TCZ7 52 aa0.74□□□□□ -2.29
CCDC7-213ENST00000639290 MMP24-AS1A0A0U1RRL7 71 aa0.65□□□□□ -2.31
CCDC7-213ENST00000639290 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
CCDC7-213ENST00000639290 TNP1P09430 55 aa0.55□□□□□ -2.32
CCDC7-213ENST00000639290 PRM1P04553 51 aa0.53□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 46.6 ms