RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-222ENST00000636022 SPRR2FQ96RM1 72 aa3.05□□□□□ -1.92
CACNA1A-222ENST00000636022 KRTAP2-3P0C7H8 128 aa3.04□□□□□ -1.92
CACNA1A-222ENST00000636022 KRTAP2-4Q9BYR9 128 aa3.04□□□□□ -1.92
CACNA1A-222ENST00000636022 PLAC4Q8WY50 150 aa3.03□□□□□ -1.92
CACNA1A-222ENST00000636022 KRTAP12-2P59991 146 aa3.02□□□□□ -1.93
CACNA1A-222ENST00000636022 SPINT4Q6UDR6 99 aa3.02□□□□□ -1.93
CACNA1A-222ENST00000636022 R4GN34 69 aa3.02□□□□□ -1.93
CACNA1A-222ENST00000636022 SPRR2EP22531 72 aa3.01□□□□□ -1.93
CACNA1A-222ENST00000636022 SPRR2BP35325 72 aa3.01□□□□□ -1.93
CACNA1A-222ENST00000636022 SPRR2AP35326 72 aa3.01□□□□□ -1.93
CACNA1A-222ENST00000636022 KRTAP8-1Q8IUC2 63 aa3.01□□□□□ -1.93
CACNA1A-222ENST00000636022 M0QZ58 72 aa2.99□□□□□ -1.93
CACNA1A-222ENST00000636022 LCE1AQ5T7P2 110 aa2.99□□□□□ -1.93
CACNA1A-222ENST00000636022 KRTAP10-7P60409 375 aaPredicted RBP2.94□□□□□ -1.94
CACNA1A-222ENST00000636022 KRTAP2-2Q9BYT5 123 aa2.94□□□□□ -1.94
CACNA1A-222ENST00000636022 KRTAP2-1Q9BYU5 128 aa2.94□□□□□ -1.94
CACNA1A-222ENST00000636022 DSTQ03001 7570 aaKnown RBP2.94□□□□□ -1.94
CACNA1A-222ENST00000636022 A0A1B0GU33 70 aa2.93□□□□□ -1.94
CACNA1A-222ENST00000636022 KRTAP10-12P60413 245 aa2.93□□□□□ -1.94
CACNA1A-222ENST00000636022 SPRR2DP22532 72 aa2.91□□□□□ -1.94
CACNA1A-222ENST00000636022 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
CACNA1A-222ENST00000636022 CAMK2N1Q7Z7J9 78 aa2.9□□□□□ -1.95
CACNA1A-222ENST00000636022 MT3P25713 68 aa2.87□□□□□ -1.95
CACNA1A-222ENST00000636022 C10orf95Q9H7T3 257 aa2.84□□□□□ -1.95
CACNA1A-222ENST00000636022 KRTAP13-4Q3LI77 160 aa2.82□□□□□ -1.96
CACNA1A-222ENST00000636022 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.79□□□□□ -1.96
CACNA1A-222ENST00000636022 KRTAP19-7Q3SYF9 63 aa2.77□□□□□ -1.97
CACNA1A-222ENST00000636022 HMCN1Q96RW7 5635 aa2.75□□□□□ -1.97
CACNA1A-222ENST00000636022 MT1EP04732 61 aa2.74□□□□□ -1.97
CACNA1A-222ENST00000636022 KRTAP19-3Q7Z4W3 81 aa2.72□□□□□ -1.97
CACNA1A-222ENST00000636022 LCE1EQ5T753 118 aa2.69□□□□□ -1.98
CACNA1A-222ENST00000636022 A0A0D9SG42 100 aa2.68□□□□□ -1.98
CACNA1A-222ENST00000636022 AHNAK2Q8IVF2 5795 aa2.68□□□□□ -1.98
CACNA1A-222ENST00000636022 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
CACNA1A-222ENST00000636022 KRTAP19-5Q3LI72 72 aa2.66□□□□□ -1.98
CACNA1A-222ENST00000636022 MT1GP13640 62 aa2.65□□□□□ -1.99
CACNA1A-222ENST00000636022 KRTAP12-1P59990 96 aa2.65□□□□□ -1.99
CACNA1A-222ENST00000636022 SPRR5A0A1B0GTR4 108 aa2.64□□□□□ -1.99
CACNA1A-222ENST00000636022 INE1O15225 51 aa2.64□□□□□ -1.99
CACNA1A-222ENST00000636022 MT1MQ8N339 61 aa2.61□□□□□ -1.99
CACNA1A-222ENST00000636022 PP632Q6XCG6 107 aa2.6□□□□□ -1.99
CACNA1A-222ENST00000636022 MT1LQ93083 61 aa2.6□□□□□ -1.99
CACNA1A-222ENST00000636022 MT4P47944 62 aa2.56□□□□□ -2
CACNA1A-222ENST00000636022 KRTAP4-3Q9BYR4 195 aa2.56□□□□□ -2
CACNA1A-222ENST00000636022 LCE3AQ5TA76 89 aa2.55□□□□□ -2
CACNA1A-222ENST00000636022 KRTAP5-4Q6L8H1 288 aa2.55□□□□□ -2
CACNA1A-222ENST00000636022 TNP1P09430 55 aa2.52□□□□□ -2.01
CACNA1A-222ENST00000636022 KRTAP5-10Q6L8G5 202 aa2.48□□□□□ -2.01
CACNA1A-222ENST00000636022 KRTAP12-3P60328 96 aa2.46□□□□□ -2.02
CACNA1A-222ENST00000636022 SYNE1Q8NF91 8797 aaKnown RBP2.43□□□□□ -2.02
CACNA1A-222ENST00000636022 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
CACNA1A-222ENST00000636022 KRTAP20-2Q3LI61 65 aa2.4□□□□□ -2.03
CACNA1A-222ENST00000636022 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
CACNA1A-222ENST00000636022 KRTAP5-7Q6L8G8 165 aa2.39□□□□□ -2.03
CACNA1A-222ENST00000636022 KRTAP12-4P60329 112 aa2.34□□□□□ -2.03
CACNA1A-222ENST00000636022 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
CACNA1A-222ENST00000636022 KRTAP9-6A8MVA2 160 aa2.28□□□□□ -2.04
CACNA1A-222ENST00000636022 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
CACNA1A-222ENST00000636022 MUC5BQ9HC84 5762 aaPredicted RBP2.26□□□□□ -2.05
CACNA1A-222ENST00000636022 LCE3CQ5T5A8 94 aa2.26□□□□□ -2.05
CACNA1A-222ENST00000636022 OBSCNQ5VST9 7968 aa2.25□□□□□ -2.05
CACNA1A-222ENST00000636022 KRTAP5-2Q701N4 177 aa2.22□□□□□ -2.05
CACNA1A-222ENST00000636022 MT1AP04731 61 aa2.21□□□□□ -2.06
CACNA1A-222ENST00000636022 KRTAP6-1Q3LI64 71 aa2.21□□□□□ -2.06
CACNA1A-222ENST00000636022 LCE1FQ5T754 118 aa2.21□□□□□ -2.06
CACNA1A-222ENST00000636022 MUC5ACP98088 5654 aa2.19□□□□□ -2.06
CACNA1A-222ENST00000636022 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
CACNA1A-222ENST00000636022 KRTAP6-2Q3LI66 62 aa2.12□□□□□ -2.07
CACNA1A-222ENST00000636022 LCE3EQ5T5B0 92 aa1.93□□□□□ -2.1
CACNA1A-222ENST00000636022 LCE1BQ5T7P3 118 aa1.76□□□□□ -2.13
CACNA1A-222ENST00000636022 LCE1CQ5T751 118 aa1.75□□□□□ -2.13
CACNA1A-222ENST00000636022 PRM1P04553 51 aa1.61□□□□□ -2.15
CACNA1A-222ENST00000636022 LCE3DQ9BYE3 92 aa1.61□□□□□ -2.15
CACNA1A-222ENST00000636022 KRTAP21-2Q3LI59 83 aa1.47□□□□□ -2.17
CACNA1A-222ENST00000636022 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
CACNA1A-222ENST00000636022 MUC19Q7Z5P9 8384 aa1.39□□□□□ -2.19
CACNA1A-222ENST00000636022 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
CACNA1A-222ENST00000636022 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 39.9 ms