RNA–Protein interactions for RNA: ENST00000635893.1

SCN1A-211, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 168 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-211ENST00000635893 SERF2P84101 59 aa-3.54□□□□□ -2.98
SCN1A-211ENST00000635893 ABCC3O15438 1527 aa-3.54□□□□□ -2.98
SCN1A-211ENST00000635893 DCAF1Q9Y4B6 1507 aa-3.54□□□□□ -2.98
SCN1A-211ENST00000635893 IGIPA6NJ69 53 aa-3.55□□□□□ -2.98
SCN1A-211ENST00000635893 S100A12P80511 92 aa-3.55□□□□□ -2.98
SCN1A-211ENST00000635893 PYY3Q5JQD4 70 aa-3.55□□□□□ -2.98
SCN1A-211ENST00000635893 ABCC1P33527 1531 aa-3.55□□□□□ -2.98
SCN1A-211ENST00000635893 H0YGX0 51 aa-3.56□□□□□ -2.98
SCN1A-211ENST00000635893 TRPM2O94759 1503 aa-3.58□□□□□ -2.98
SCN1A-211ENST00000635893 ABCA6Q8N139 1617 aa-3.59□□□□□ -2.98
SCN1A-211ENST00000635893 CFAP74Q9C0B2 1584 aa-3.59□□□□□ -2.98
SCN1A-211ENST00000635893 PRXQ9BXM0 1461 aa-3.6□□□□□ -2.99
SCN1A-211ENST00000635893 LOC105371267A0A1B0GV96 52 aa-3.6□□□□□ -2.99
SCN1A-211ENST00000635893 PDCD5O14737 125 aa-3.6□□□□□ -2.99
SCN1A-211ENST00000635893 LINC01549A6NIU2 74 aa-3.62□□□□□ -2.99
SCN1A-211ENST00000635893 TDRG1Q3Y452 100 aa-3.64□□□□□ -2.99
SCN1A-211ENST00000635893 ST20Q9HBF5 79 aa-3.64□□□□□ -2.99
SCN1A-211ENST00000635893 CNTLNQ9NXG0 1405 aa-3.64□□□□□ -2.99
SCN1A-211ENST00000635893 GNG13Q9P2W3 67 aa-3.65□□□□□ -2.99
SCN1A-211ENST00000635893 HILPDAQ9Y5L2 63 aa-3.65□□□□□ -2.99
SCN1A-211ENST00000635893 DUOX1Q9NRD9 1551 aa-3.66□□□□□ -3
SCN1A-211ENST00000635893 ABCA9Q8IUA7 1624 aa-3.66□□□□□ -3
SCN1A-211ENST00000635893 NDUFA1O15239 70 aa-3.67□□□□□ -3
SCN1A-211ENST00000635893 ABCA5Q8WWZ7 1642 aa-3.68□□□□□ -3
SCN1A-211ENST00000635893 PLNP26678 52 aa-3.69□□□□□ -3
SCN1A-211ENST00000635893 ADIRFQ15847 76 aa-3.7□□□□□ -3
SCN1A-211ENST00000635893 Q9H521 79 aa-3.71□□□□□ -3
SCN1A-211ENST00000635893 TOP2AP11388 1531 aaKnown RBP-3.71□□□□□ -3
SCN1A-211ENST00000635893 IQGAP1P46940 1657 aa-3.71□□□□□ -3
SCN1A-211ENST00000635893 LINC00587B1AMM8 73 aa-3.73□□□□□ -3.01
SCN1A-211ENST00000635893 C18orf32Q8TCD1 76 aa-3.73□□□□□ -3.01
SCN1A-211ENST00000635893 M0R143 59 aa-3.74□□□□□ -3.01
SCN1A-211ENST00000635893 C14orf144Q96I85 54 aa-3.74□□□□□ -3.01
SCN1A-211ENST00000635893 APELAP0DMC3 54 aa-3.75□□□□□ -3.01
SCN1A-211ENST00000635893 IQGAP3Q86VI3 1631 aa-3.77□□□□□ -3.01
SCN1A-211ENST00000635893 ERICH3Q5RHP9 1530 aa-3.77□□□□□ -3.01
SCN1A-211ENST00000635893 H3BUX3 64 aa-3.78□□□□□ -3.01
SCN1A-211ENST00000635893 CPS1P31327 1500 aa-3.79□□□□□ -3.02
SCN1A-211ENST00000635893 ATP6V1G2-DDX39BF2Z307 99 aa-3.8□□□□□ -3.02
SCN1A-211ENST00000635893 ATP7AQ04656 1500 aa-3.81□□□□□ -3.02
SCN1A-211ENST00000635893 A0A096LPF7 62 aa-3.82□□□□□ -3.02
SCN1A-211ENST00000635893 EFCAB10A6NFE3 127 aa-3.83□□□□□ -3.02
SCN1A-211ENST00000635893 S100A13Q99584 98 aa-3.84□□□□□ -3.02
SCN1A-211ENST00000635893 V9GYS6 101 aa-3.84□□□□□ -3.02
SCN1A-211ENST00000635893 HTN3P15516 51 aa-3.85□□□□□ -3.03
SCN1A-211ENST00000635893 PKIAP61925 76 aa-3.85□□□□□ -3.03
SCN1A-211ENST00000635893 UGGT2Q9NYU1 1516 aa-3.85□□□□□ -3.03
SCN1A-211ENST00000635893 CCDC18Q5T9S5 1454 aa-3.86□□□□□ -3.03
SCN1A-211ENST00000635893 ABCC8Q09428 1581 aa-3.86□□□□□ -3.03
SCN1A-211ENST00000635893 A0A087WWC5 75 aa-3.87□□□□□ -3.03
SCN1A-211ENST00000635893 RPL39P62891 51 aaKnown RBP-3.87□□□□□ -3.03
SCN1A-211ENST00000635893 SAMD9LQ8IVG5 1584 aa-3.89□□□□□ -3.03
SCN1A-211ENST00000635893 RPL39LQ96EH5 51 aaKnown RBP-3.95□□□□□ -3.04
SCN1A-211ENST00000635893 ABCA10Q8WWZ4 1543 aa-3.95□□□□□ -3.04
SCN1A-211ENST00000635893 MROH2BQ7Z745 1585 aa-3.97□□□□□ -3.04
SCN1A-211ENST00000635893 FANCD2Q9BXW9 1451 aa-3.98□□□□□ -3.05
SCN1A-211ENST00000635893 SMCO4Q9NRQ5 59 aa-3.98□□□□□ -3.05
SCN1A-211ENST00000635893 H3BSH0 61 aa-4.05□□□□□ -3.06
SCN1A-211ENST00000635893 CMC2Q9NRP2 79 aa-4.07□□□□□ -3.06
SCN1A-211ENST00000635893 PRCDQ00LT1 54 aa-4.1□□□□□ -3.07
SCN1A-211ENST00000635893 EFCAB5A4FU69 1503 aa-4.11□□□□□ -3.07
SCN1A-211ENST00000635893 K7EIM0 57 aa-4.14□□□□□ -3.07
SCN1A-211ENST00000635893 TMEM167AQ8TBQ9 72 aa-4.14□□□□□ -3.07
SCN1A-211ENST00000635893 Q9Y3F1 56 aa-4.21□□□□□ -3.08
SCN1A-211ENST00000635893 SMIM5Q71RC9 77 aa-4.23□□□□□ -3.09
SCN1A-211ENST00000635893 IQGAP2Q13576 1575 aa-4.26□□□□□ -3.09
SCN1A-211ENST00000635893 ARHGAP5-AS1Q96IT6 56 aa-4.26□□□□□ -3.09
SCN1A-211ENST00000635893 SNRPGP15A8MWD9 76 aa-4.33□□□□□ -3.1
SCN1A-211ENST00000635893 COX14Q96I36 57 aa-4.33□□□□□ -3.1
SCN1A-211ENST00000635893 GNG2P59768 71 aa-4.36□□□□□ -3.11
SCN1A-211ENST00000635893 DEFB108BQ8NET1 73 aa-4.47□□□□□ -3.13
SCN1A-211ENST00000635893 RPL39P5Q59GN2 51 aa-4.51□□□□□ -3.13
SCN1A-211ENST00000635893 DEFB108AA8MXU0 73 aa-4.55□□□□□ -3.14
SCN1A-211ENST00000635893 STATHP02808 62 aa-4.55□□□□□ -3.14
SCN1A-211ENST00000635893 SNRPGP62308 76 aaKnown RBP-4.59□□□□□ -3.14
SCN1A-211ENST00000635893 GCC2Q8IWJ2 1684 aa-4.62□□□□□ -3.15
SCN1A-211ENST00000635893 TOMM5Q8N4H5 51 aa-4.73□□□□□ -3.17
SCN1A-211ENST00000635893 SMIM31A0A1B0GVY4 71 aa-4.79□□□□□ -3.18
Retrieved 78 of 20,778 RNA–protein pairs in 68.8 ms