RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 NOP10Q9NPE3 64 aaKnown RBP1.71□□□□□ -2.14
UBE2D3-233ENST00000618836 MUC12Q9UKN1 5478 aa1.71□□□□□ -2.14
UBE2D3-233ENST00000618836 HTN1P15515 57 aa1.71□□□□□ -2.14
UBE2D3-233ENST00000618836 KRTAP10-10P60014 251 aa1.71□□□□□ -2.14
UBE2D3-233ENST00000618836 KRTAP19-2Q3LHN2 52 aa1.71□□□□□ -2.14
UBE2D3-233ENST00000618836 A0A0D9SG42 100 aa1.68□□□□□ -2.14
UBE2D3-233ENST00000618836 DEFB136Q30KP8 78 aa1.67□□□□□ -2.14
UBE2D3-233ENST00000618836 KRTAP13-1Q8IUC0 172 aa1.65□□□□□ -2.14
UBE2D3-233ENST00000618836 MUC5ACP98088 5654 aa1.65□□□□□ -2.14
UBE2D3-233ENST00000618836 MT1HP80294 61 aa1.65□□□□□ -2.15
UBE2D3-233ENST00000618836 KRTAP5-4Q6L8H1 288 aa1.64□□□□□ -2.15
UBE2D3-233ENST00000618836 MDN1Q9NU22 5596 aa1.64□□□□□ -2.15
UBE2D3-233ENST00000618836 M0QZ58 72 aa1.62□□□□□ -2.15
UBE2D3-233ENST00000618836 KRTAP5-11Q6L8G4 156 aa1.62□□□□□ -2.15
UBE2D3-233ENST00000618836 H3BNG1 76 aa1.59□□□□□ -2.15
UBE2D3-233ENST00000618836 KRTAP10-5P60370 271 aa1.58□□□□□ -2.16
UBE2D3-233ENST00000618836 LCE1EQ5T753 118 aa1.58□□□□□ -2.16
UBE2D3-233ENST00000618836 LCE3DQ9BYE3 92 aa1.57□□□□□ -2.16
UBE2D3-233ENST00000618836 KRTAP12-4P60329 112 aa1.56□□□□□ -2.16
UBE2D3-233ENST00000618836 SPART-AS1P0CW21 52 aa1.54□□□□□ -2.16
UBE2D3-233ENST00000618836 A0A096LNI7 61 aa1.54□□□□□ -2.16
UBE2D3-233ENST00000618836 KRTAP10-7P60409 375 aaPredicted RBP1.53□□□□□ -2.16
UBE2D3-233ENST00000618836 A0A096LPF7 62 aa1.52□□□□□ -2.17
UBE2D3-233ENST00000618836 KRTAP4-4Q9BYR3 166 aa1.52□□□□□ -2.17
UBE2D3-233ENST00000618836 SPINK6Q6UWN8 80 aa1.52□□□□□ -2.17
UBE2D3-233ENST00000618836 DEFB135Q30KP9 77 aa1.51□□□□□ -2.17
UBE2D3-233ENST00000618836 LINC01556Q5JQF7 62 aa1.51□□□□□ -2.17
UBE2D3-233ENST00000618836 SMR3BP02814 79 aaPredicted RBP1.45□□□□□ -2.18
UBE2D3-233ENST00000618836 KRTAP5-1Q6L8H4 278 aa1.45□□□□□ -2.18
UBE2D3-233ENST00000618836 KRTAP5-2Q701N4 177 aa1.45□□□□□ -2.18
UBE2D3-233ENST00000618836 KRTAP4-1Q9BYQ7 146 aa1.45□□□□□ -2.18
UBE2D3-233ENST00000618836 KRTAP5-8O75690 187 aa1.42□□□□□ -2.18
UBE2D3-233ENST00000618836 KRTAP9-6A8MVA2 160 aa1.41□□□□□ -2.18
UBE2D3-233ENST00000618836 TNP1P09430 55 aa1.41□□□□□ -2.18
UBE2D3-233ENST00000618836 DEFB4AO15263 64 aa1.41□□□□□ -2.18
UBE2D3-233ENST00000618836 SPRR2EP22531 72 aa1.41□□□□□ -2.18
UBE2D3-233ENST00000618836 SPRR2BP35325 72 aa1.41□□□□□ -2.18
UBE2D3-233ENST00000618836 SPRR2AP35326 72 aa1.41□□□□□ -2.18
UBE2D3-233ENST00000618836 SPRR2DP22532 72 aa1.39□□□□□ -2.19
UBE2D3-233ENST00000618836 HTN3P15516 51 aa1.39□□□□□ -2.19
UBE2D3-233ENST00000618836 RPS29P62273 56 aaKnown RBP1.38□□□□□ -2.19
UBE2D3-233ENST00000618836 C9orf92A6NGG3 77 aa1.36□□□□□ -2.19
UBE2D3-233ENST00000618836 MT2AP02795 61 aa1.34□□□□□ -2.19
UBE2D3-233ENST00000618836 KRTAP12-3P60328 96 aa1.34□□□□□ -2.2
UBE2D3-233ENST00000618836 KRTAP8-1Q8IUC2 63 aa1.32□□□□□ -2.2
UBE2D3-233ENST00000618836 MT1FP04733 61 aa1.29□□□□□ -2.2
UBE2D3-233ENST00000618836 M0R2T5 61 aa1.28□□□□□ -2.2
UBE2D3-233ENST00000618836 KRTAP5-5Q701N2 237 aaPredicted RBP1.24□□□□□ -2.21
UBE2D3-233ENST00000618836 LCE3AQ5TA76 89 aa1.23□□□□□ -2.21
UBE2D3-233ENST00000618836 KRTAP4-3Q9BYR4 195 aa1.23□□□□□ -2.21
UBE2D3-233ENST00000618836 MUC19Q7Z5P9 8384 aa1.22□□□□□ -2.21
UBE2D3-233ENST00000618836 KRTAP20-2Q3LI61 65 aa1.19□□□□□ -2.22
UBE2D3-233ENST00000618836 SPRR2FQ96RM1 72 aa1.18□□□□□ -2.22
UBE2D3-233ENST00000618836 PRM1P04553 51 aa1.17□□□□□ -2.22
UBE2D3-233ENST00000618836 KRTAP19-5Q3LI72 72 aa1.16□□□□□ -2.22
UBE2D3-233ENST00000618836 KRTAP19-8Q3LI54 63 aa1.13□□□□□ -2.23
UBE2D3-233ENST00000618836 MT1BP07438 61 aa1.09□□□□□ -2.23
UBE2D3-233ENST00000618836 MT1AP04731 61 aa1.09□□□□□ -2.24
UBE2D3-233ENST00000618836 MT4P47944 62 aa1.09□□□□□ -2.24
UBE2D3-233ENST00000618836 DSTQ03001 7570 aaKnown RBP1.07□□□□□ -2.24
UBE2D3-233ENST00000618836 LCE1CQ5T751 118 aa1.03□□□□□ -2.24
UBE2D3-233ENST00000618836 LCE1BQ5T7P3 118 aa1.03□□□□□ -2.24
UBE2D3-233ENST00000618836 SPRR2GQ9BYE4 73 aa1.02□□□□□ -2.25
UBE2D3-233ENST00000618836 KRTAP19-3Q7Z4W3 81 aa1□□□□□ -2.25
UBE2D3-233ENST00000618836 KRTAP6-2Q3LI66 62 aa0.98□□□□□ -2.25
UBE2D3-233ENST00000618836 SYNE1Q8NF91 8797 aaKnown RBP0.94□□□□□ -2.26
UBE2D3-233ENST00000618836 MT1EP04732 61 aa0.94□□□□□ -2.26
UBE2D3-233ENST00000618836 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
UBE2D3-233ENST00000618836 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
UBE2D3-233ENST00000618836 MT1XP80297 61 aa0.89□□□□□ -2.27
UBE2D3-233ENST00000618836 MT1LQ93083 61 aa0.87□□□□□ -2.27
UBE2D3-233ENST00000618836 MT1GP13640 62 aa0.84□□□□□ -2.27
UBE2D3-233ENST00000618836 KRTAP19-7Q3SYF9 63 aa0.8□□□□□ -2.28
UBE2D3-233ENST00000618836 MT1MQ8N339 61 aa0.79□□□□□ -2.28
UBE2D3-233ENST00000618836 KRTAP21-2Q3LI59 83 aa0.76□□□□□ -2.29
UBE2D3-233ENST00000618836 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
UBE2D3-233ENST00000618836 KRTAP6-1Q3LI64 71 aa0.65□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 6.5 ms