RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 TRAV22A0A0B4J277 110 aa2.26□□□□□ -2.05
MUC1-227ENST00000615517 A0A0D9SG42 100 aa2.26□□□□□ -2.05
MUC1-227ENST00000615517 LOC101927531A0A1B0GV80 90 aa2.26□□□□□ -2.05
MUC1-227ENST00000615517 F8W1H4 67 aa2.26□□□□□ -2.05
MUC1-227ENST00000615517 LUZP6Q538Z0 58 aa2.26□□□□□ -2.05
MUC1-227ENST00000615517 LCE1FQ5T754 118 aa2.24□□□□□ -2.05
MUC1-227ENST00000615517 J3QR89 54 aa2.23□□□□□ -2.05
MUC1-227ENST00000615517 PMAIP1Q13794 54 aa2.23□□□□□ -2.05
MUC1-227ENST00000615517 KRTAP5-2Q701N4 177 aa2.23□□□□□ -2.05
MUC1-227ENST00000615517 SPANXA2-OT1Q8N9U9 137 aa2.23□□□□□ -2.05
MUC1-227ENST00000615517 SPCS1Q9Y6A9 102 aa2.21□□□□□ -2.06
MUC1-227ENST00000615517 ETDBQ3ZM63 59 aa2.2□□□□□ -2.06
MUC1-227ENST00000615517 K7ERS5 55 aa2.19□□□□□ -2.06
MUC1-227ENST00000615517 UQCRQO14949 82 aa2.18□□□□□ -2.06
MUC1-227ENST00000615517 HIST1H4AP62805 103 aaKnown RBP2.18□□□□□ -2.06
MUC1-227ENST00000615517 OBSCNQ5VST9 7968 aa2.18□□□□□ -2.06
MUC1-227ENST00000615517 H3BT86 120 aa2.16□□□□□ -2.06
MUC1-227ENST00000615517 TMEM258P61165 79 aa2.16□□□□□ -2.06
MUC1-227ENST00000615517 C10orf95Q9H7T3 257 aa2.16□□□□□ -2.06
MUC1-227ENST00000615517 COX7CP15954 63 aa2.15□□□□□ -2.07
MUC1-227ENST00000615517 KRTAP9-6A8MVA2 160 aa2.14□□□□□ -2.07
MUC1-227ENST00000615517 UBL5Q9BZL1 73 aa2.14□□□□□ -2.07
MUC1-227ENST00000615517 H0Y9P7 68 aa2.13□□□□□ -2.07
MUC1-227ENST00000615517 KRTAP13-4Q3LI77 160 aa2.13□□□□□ -2.07
MUC1-227ENST00000615517 A6NED7 52 aa2.12□□□□□ -2.07
MUC1-227ENST00000615517 LCE3CQ5T5A8 94 aa2.12□□□□□ -2.07
MUC1-227ENST00000615517 LCE3AQ5TA76 89 aa2.11□□□□□ -2.07
MUC1-227ENST00000615517 SERP1Q9Y6X1 66 aa2.11□□□□□ -2.07
MUC1-227ENST00000615517 ATOX1O00244 68 aa2.1□□□□□ -2.07
MUC1-227ENST00000615517 KRTAP5-1Q6L8H4 278 aa2.1□□□□□ -2.07
MUC1-227ENST00000615517 SPINT4Q6UDR6 99 aa2.08□□□□□ -2.08
MUC1-227ENST00000615517 A8MU10 97 aa2.07□□□□□ -2.08
MUC1-227ENST00000615517 LINC00643Q86TS7 51 aa2.07□□□□□ -2.08
MUC1-227ENST00000615517 SERP2Q8N6R1 65 aa2.07□□□□□ -2.08
MUC1-227ENST00000615517 DMAC1Q96GE9 116 aa2.07□□□□□ -2.08
MUC1-227ENST00000615517 LINC00208Q96KT6 92 aa2.06□□□□□ -2.08
MUC1-227ENST00000615517 H7BZZ5 65 aa2.05□□□□□ -2.08
MUC1-227ENST00000615517 KRTAP6-1Q3LI64 71 aa2.05□□□□□ -2.08
MUC1-227ENST00000615517 A0A1B0GU33 70 aa2.03□□□□□ -2.08
MUC1-227ENST00000615517 KRTAP6-2Q3LI66 62 aa2.03□□□□□ -2.08
MUC1-227ENST00000615517 KTN1-AS1Q86SY8 53 aa2.03□□□□□ -2.08
MUC1-227ENST00000615517 BRK1Q8WUW1 75 aa2.02□□□□□ -2.09
MUC1-227ENST00000615517 MT1AP04731 61 aa2.01□□□□□ -2.09
MUC1-227ENST00000615517 ATP5EP56381 51 aaPredicted RBP2.01□□□□□ -2.09
MUC1-227ENST00000615517 Q1T7F1 81 aa2.01□□□□□ -2.09
MUC1-227ENST00000615517 KRTAP25-1Q3LHN0 102 aa2.01□□□□□ -2.09
MUC1-227ENST00000615517 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
MUC1-227ENST00000615517 KRTAP12-3P60328 96 aa2□□□□□ -2.09
MUC1-227ENST00000615517 TRAV7A0A075B6U4 112 aa1.99□□□□□ -2.09
MUC1-227ENST00000615517 H3BPC8 53 aa1.99□□□□□ -2.09
MUC1-227ENST00000615517 ATP5EP2Q5VTU8 51 aa1.96□□□□□ -2.1
MUC1-227ENST00000615517 LCE3EQ5T5B0 92 aa1.94□□□□□ -2.1
MUC1-227ENST00000615517 KRTAP12-1P59990 96 aa1.93□□□□□ -2.1
MUC1-227ENST00000615517 SPTSSBQ8NFR3 76 aa1.93□□□□□ -2.1
MUC1-227ENST00000615517 TNP1P09430 55 aa1.91□□□□□ -2.1
MUC1-227ENST00000615517 ACYP2P14621 99 aa1.9□□□□□ -2.11
MUC1-227ENST00000615517 SPATA8Q6RVD6 105 aa1.89□□□□□ -2.11
MUC1-227ENST00000615517 CDC42SE1Q9NRR8 79 aa1.87□□□□□ -2.11
MUC1-227ENST00000615517 SNURFQ9Y675 71 aa1.87□□□□□ -2.11
MUC1-227ENST00000615517 CHKB-CPT1BH3BT56 60 aa1.85□□□□□ -2.11
MUC1-227ENST00000615517 LINC01558Q9Y6Z2 57 aa1.81□□□□□ -2.12
MUC1-227ENST00000615517 ROMO1P60602 79 aa1.79□□□□□ -2.12
MUC1-227ENST00000615517 PRR15LQ9BU68 103 aa1.75□□□□□ -2.13
MUC1-227ENST00000615517 LCE1BQ5T7P3 118 aa1.74□□□□□ -2.13
MUC1-227ENST00000615517 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
MUC1-227ENST00000615517 MIR22HGQ0VDD5 57 aa1.69□□□□□ -2.14
MUC1-227ENST00000615517 COA5Q86WW8 74 aa1.69□□□□□ -2.14
MUC1-227ENST00000615517 LCE1CQ5T751 118 aa1.68□□□□□ -2.14
MUC1-227ENST00000615517 A0A1B0GU69 56 aa1.64□□□□□ -2.15
MUC1-227ENST00000615517 UQCR11O14957 56 aa1.61□□□□□ -2.15
MUC1-227ENST00000615517 LCE3DQ9BYE3 92 aa1.6□□□□□ -2.15
MUC1-227ENST00000615517 INE1O15225 51 aa1.53□□□□□ -2.16
MUC1-227ENST00000615517 MUC19Q7Z5P9 8384 aa1.36□□□□□ -2.19
MUC1-227ENST00000615517 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
MUC1-227ENST00000615517 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
MUC1-227ENST00000615517 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
MUC1-227ENST00000615517 PRM1P04553 51 aa0.79□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 146.1 ms