RNA–Protein interactions for RNA: ENST00000608431.1

LINC00649-213, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 260 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-213ENST00000608431 KRTAP13-4Q3LI77 160 aa2.84□□□□□ -1.95
LINC00649-213ENST00000608431 NDUFAF8A1L188 74 aa2.83□□□□□ -1.96
LINC00649-213ENST00000608431 S4R3F8 94 aa2.82□□□□□ -1.96
LINC00649-213ENST00000608431 A0A0D9SG42 100 aa2.81□□□□□ -1.96
LINC00649-213ENST00000608431 C10orf95Q9H7T3 257 aa2.81□□□□□ -1.96
LINC00649-213ENST00000608431 KRTAP12-1P59990 96 aa2.77□□□□□ -1.97
LINC00649-213ENST00000608431 KRTAP12-2P59991 146 aa2.77□□□□□ -1.97
LINC00649-213ENST00000608431 SPRR2EP22531 72 aa2.76□□□□□ -1.97
LINC00649-213ENST00000608431 SPRR2BP35325 72 aa2.76□□□□□ -1.97
LINC00649-213ENST00000608431 SPRR2AP35326 72 aa2.76□□□□□ -1.97
LINC00649-213ENST00000608431 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
LINC00649-213ENST00000608431 M0QZ58 72 aa2.74□□□□□ -1.97
LINC00649-213ENST00000608431 DSTQ03001 7570 aaKnown RBP2.73□□□□□ -1.97
LINC00649-213ENST00000608431 SPRR2FQ96RM1 72 aa2.69□□□□□ -1.98
LINC00649-213ENST00000608431 HMCN1Q96RW7 5635 aa2.68□□□□□ -1.98
LINC00649-213ENST00000608431 SPRR2DP22532 72 aa2.68□□□□□ -1.98
LINC00649-213ENST00000608431 PLAC4Q8WY50 150 aa2.65□□□□□ -1.99
LINC00649-213ENST00000608431 AHNAK2Q8IVF2 5795 aa2.65□□□□□ -1.99
LINC00649-213ENST00000608431 LUZP6Q538Z0 58 aa2.64□□□□□ -1.99
LINC00649-213ENST00000608431 KRTAP10-5P60370 271 aa2.62□□□□□ -1.99
LINC00649-213ENST00000608431 KRTAP10-12P60413 245 aa2.62□□□□□ -1.99
LINC00649-213ENST00000608431 PP632Q6XCG6 107 aa2.61□□□□□ -1.99
LINC00649-213ENST00000608431 R4GN34 69 aa2.57□□□□□ -2
LINC00649-213ENST00000608431 MT1BP07438 61 aa2.54□□□□□ -2
LINC00649-213ENST00000608431 LCE3CQ5T5A8 94 aa2.54□□□□□ -2
LINC00649-213ENST00000608431 KRTAP5-10Q6L8G5 202 aa2.54□□□□□ -2
LINC00649-213ENST00000608431 KRTAP10-7P60409 375 aaPredicted RBP2.53□□□□□ -2
LINC00649-213ENST00000608431 KRTAP8-1Q8IUC2 63 aa2.53□□□□□ -2
LINC00649-213ENST00000608431 KRTAP5-7Q6L8G8 165 aa2.52□□□□□ -2.01
LINC00649-213ENST00000608431 SPRR5A0A1B0GTR4 108 aa2.5□□□□□ -2.01
LINC00649-213ENST00000608431 KRTAP19-8Q3LI54 63 aa2.49□□□□□ -2.01
LINC00649-213ENST00000608431 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
LINC00649-213ENST00000608431 CAMK2N1Q7Z7J9 78 aa2.46□□□□□ -2.02
LINC00649-213ENST00000608431 KRTAP5-11Q6L8G4 156 aa2.44□□□□□ -2.02
LINC00649-213ENST00000608431 TNP1P09430 55 aa2.43□□□□□ -2.02
LINC00649-213ENST00000608431 SPRR2GQ9BYE4 73 aa2.43□□□□□ -2.02
LINC00649-213ENST00000608431 AHNAKQ09666 5890 aaKnown RBP2.4□□□□□ -2.02
LINC00649-213ENST00000608431 PRO2289Q9P1D8 64 aa2.39□□□□□ -2.03
LINC00649-213ENST00000608431 INE1O15225 51 aa2.36□□□□□ -2.03
LINC00649-213ENST00000608431 MT4P47944 62 aa2.36□□□□□ -2.03
LINC00649-213ENST00000608431 LCE3EQ5T5B0 92 aa2.33□□□□□ -2.04
LINC00649-213ENST00000608431 KRTAP9-6A8MVA2 160 aa2.32□□□□□ -2.04
LINC00649-213ENST00000608431 MUC5BQ9HC84 5762 aaPredicted RBP2.31□□□□□ -2.04
LINC00649-213ENST00000608431 MUC5ACP98088 5654 aa2.28□□□□□ -2.04
LINC00649-213ENST00000608431 MT1XP80297 61 aa2.27□□□□□ -2.05
LINC00649-213ENST00000608431 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
LINC00649-213ENST00000608431 LCE3AQ5TA76 89 aa2.25□□□□□ -2.05
LINC00649-213ENST00000608431 KRTAP5-4Q6L8H1 288 aa2.19□□□□□ -2.06
LINC00649-213ENST00000608431 KRTAP12-3P60328 96 aa2.15□□□□□ -2.07
LINC00649-213ENST00000608431 KRTAP19-3Q7Z4W3 81 aa2.15□□□□□ -2.07
LINC00649-213ENST00000608431 KRTAP20-2Q3LI61 65 aa2.1□□□□□ -2.07
LINC00649-213ENST00000608431 MT1GP13640 62 aa2.07□□□□□ -2.08
LINC00649-213ENST00000608431 SYNE1Q8NF91 8797 aaKnown RBP2.06□□□□□ -2.08
LINC00649-213ENST00000608431 MT1EP04732 61 aa2.05□□□□□ -2.08
LINC00649-213ENST00000608431 OBSCNQ5VST9 7968 aa2.03□□□□□ -2.08
LINC00649-213ENST00000608431 KRTAP19-7Q3SYF9 63 aa2.03□□□□□ -2.08
LINC00649-213ENST00000608431 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
LINC00649-213ENST00000608431 KRTAP5-1Q6L8H4 278 aa2.01□□□□□ -2.09
LINC00649-213ENST00000608431 KRTAP12-4P60329 112 aa2□□□□□ -2.09
LINC00649-213ENST00000608431 KRTAP19-5Q3LI72 72 aa1.99□□□□□ -2.09
LINC00649-213ENST00000608431 MT1MQ8N339 61 aa1.99□□□□□ -2.09
LINC00649-213ENST00000608431 LCE3DQ9BYE3 92 aa1.95□□□□□ -2.1
LINC00649-213ENST00000608431 KRTAP4-3Q9BYR4 195 aa1.92□□□□□ -2.1
LINC00649-213ENST00000608431 KRTAP5-2Q701N4 177 aa1.9□□□□□ -2.11
LINC00649-213ENST00000608431 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
LINC00649-213ENST00000608431 MT1LQ93083 61 aa1.87□□□□□ -2.11
LINC00649-213ENST00000608431 KRTAP5-5Q701N2 237 aaPredicted RBP1.86□□□□□ -2.11
LINC00649-213ENST00000608431 MT1AP04731 61 aa1.67□□□□□ -2.14
LINC00649-213ENST00000608431 LCE1CQ5T751 118 aa1.67□□□□□ -2.14
LINC00649-213ENST00000608431 LCE1BQ5T7P3 118 aa1.67□□□□□ -2.14
LINC00649-213ENST00000608431 KRTAP6-2Q3LI66 62 aa1.64□□□□□ -2.15
LINC00649-213ENST00000608431 KRTAP6-1Q3LI64 71 aa1.6□□□□□ -2.15
LINC00649-213ENST00000608431 PRM1P04553 51 aa1.58□□□□□ -2.16
LINC00649-213ENST00000608431 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
LINC00649-213ENST00000608431 MUC19Q7Z5P9 8384 aa1.44□□□□□ -2.18
LINC00649-213ENST00000608431 KRTAP21-2Q3LI59 83 aa1.19□□□□□ -2.22
LINC00649-213ENST00000608431 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
LINC00649-213ENST00000608431 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 30.5 ms