RNA–Protein interactions for RNA: ENST00000593330.1

SOX2-OT-219, SOX2 overlapping transcript, humanhuman

TSL 3

Gene SOX2-OT, Length 468 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-219ENST00000593330 TRRAPQ9Y4A5 3859 aa1.03□□□□□ -2.24
SOX2-OT-219ENST00000593330 DEFB124Q8NES8 71 aa1.03□□□□□ -2.24
SOX2-OT-219ENST00000593330 PKHD1P08F94 4074 aa1.02□□□□□ -2.25
SOX2-OT-219ENST00000593330 H3BNG1 76 aa1.01□□□□□ -2.25
SOX2-OT-219ENST00000593330 TNXBP22105 4242 aa1□□□□□ -2.25
SOX2-OT-219ENST00000593330 DNAH7Q8WXX0 4024 aa1□□□□□ -2.25
SOX2-OT-219ENST00000593330 A0A096LPF7 62 aa1□□□□□ -2.25
SOX2-OT-219ENST00000593330 FAT2Q9NYQ8 4349 aa0.99□□□□□ -2.25
SOX2-OT-219ENST00000593330 Q9Y3F1 56 aa0.99□□□□□ -2.25
SOX2-OT-219ENST00000593330 MYCBP2O75592 4640 aa0.99□□□□□ -2.25
SOX2-OT-219ENST00000593330 VPS13DQ5THJ4 4388 aa0.98□□□□□ -2.25
SOX2-OT-219ENST00000593330 LRP1BQ9NZR2 4599 aa0.97□□□□□ -2.25
SOX2-OT-219ENST00000593330 U3KQA8 63 aa0.97□□□□□ -2.25
SOX2-OT-219ENST00000593330 LINC01556Q5JQF7 62 aa0.95□□□□□ -2.26
SOX2-OT-219ENST00000593330 DYNC1H1Q14204 4646 aaKnown RBP0.95□□□□□ -2.26
SOX2-OT-219ENST00000593330 HSPG2P98160 4391 aa0.94□□□□□ -2.26
SOX2-OT-219ENST00000593330 PRM1P04553 51 aa0.94□□□□□ -2.26
SOX2-OT-219ENST00000593330 LRP2P98164 4655 aa0.94□□□□□ -2.26
SOX2-OT-219ENST00000593330 LYSTQ99698 3801 aa0.94□□□□□ -2.26
SOX2-OT-219ENST00000593330 DEFB133Q30KQ1 61 aa0.93□□□□□ -2.26
SOX2-OT-219ENST00000593330 DNAH9Q9NYC9 4486 aa0.93□□□□□ -2.26
SOX2-OT-219ENST00000593330 DNAH11Q96DT5 4516 aa0.92□□□□□ -2.26
SOX2-OT-219ENST00000593330 KRTAP8-1Q8IUC2 63 aa0.92□□□□□ -2.26
SOX2-OT-219ENST00000593330 LRP1Q07954 4544 aaKnown RBP0.91□□□□□ -2.26
SOX2-OT-219ENST00000593330 PLECQ15149 4684 aaKnown RBP0.91□□□□□ -2.26
SOX2-OT-219ENST00000593330 HUWE1Q7Z6Z7 4374 aaKnown RBP0.89□□□□□ -2.27
SOX2-OT-219ENST00000593330 PKD1P98161 4303 aa0.89□□□□□ -2.27
SOX2-OT-219ENST00000593330 RPS29P62273 56 aaKnown RBP0.88□□□□□ -2.27
SOX2-OT-219ENST00000593330 STARD9Q9P2P6 4700 aa0.87□□□□□ -2.27
SOX2-OT-219ENST00000593330 FAT1Q14517 4588 aa0.87□□□□□ -2.27
SOX2-OT-219ENST00000593330 SYNE1Q8NF91 8797 aaKnown RBP0.86□□□□□ -2.27
SOX2-OT-219ENST00000593330 PKHD1L1Q86WI1 4243 aa0.85□□□□□ -2.27
SOX2-OT-219ENST00000593330 KRTAP21-1Q3LI58 79 aa0.85□□□□□ -2.27
SOX2-OT-219ENST00000593330 ANK3Q12955 4377 aaKnown RBP0.85□□□□□ -2.27
SOX2-OT-219ENST00000593330 HTN3P15516 51 aa0.84□□□□□ -2.27
SOX2-OT-219ENST00000593330 CD52P31358 61 aa0.83□□□□□ -2.28
SOX2-OT-219ENST00000593330 SMR3BP02814 79 aaPredicted RBP0.82□□□□□ -2.28
SOX2-OT-219ENST00000593330 HRNRQ86YZ3 2850 aaPredicted RBP0.82□□□□□ -2.28
SOX2-OT-219ENST00000593330 DNAH10Q8IVF4 4471 aa0.81□□□□□ -2.28
SOX2-OT-219ENST00000593330 VPS13BQ7Z7G8 4022 aa0.81□□□□□ -2.28
SOX2-OT-219ENST00000593330 DNAH8Q96JB1 4490 aa0.8□□□□□ -2.28
SOX2-OT-219ENST00000593330 APOBP04114 4563 aaKnown RBP0.8□□□□□ -2.28
SOX2-OT-219ENST00000593330 DNAH5Q8TE73 4624 aa0.79□□□□□ -2.28
SOX2-OT-219ENST00000593330 MT1AP04731 61 aa0.77□□□□□ -2.29
SOX2-OT-219ENST00000593330 DNAH2Q9P225 4427 aa0.76□□□□□ -2.29
SOX2-OT-219ENST00000593330 DNAH6Q9C0G6 4158 aa0.76□□□□□ -2.29
SOX2-OT-219ENST00000593330 DEFB4AO15263 64 aa0.76□□□□□ -2.29
SOX2-OT-219ENST00000593330 SPRR2DP22532 72 aa0.76□□□□□ -2.29
SOX2-OT-219ENST00000593330 KRTAP19-5Q3LI72 72 aa0.76□□□□□ -2.29
SOX2-OT-219ENST00000593330 DNAH3Q8TD57 4116 aa0.75□□□□□ -2.29
SOX2-OT-219ENST00000593330 KRTAP19-6Q3LI70 58 aa0.75□□□□□ -2.29
SOX2-OT-219ENST00000593330 LPAP08519 4548 aa0.74□□□□□ -2.29
SOX2-OT-219ENST00000593330 SPRR2BP35325 72 aa0.74□□□□□ -2.29
SOX2-OT-219ENST00000593330 KRTAP6-2Q3LI66 62 aa0.72□□□□□ -2.29
SOX2-OT-219ENST00000593330 FLGP20930 4061 aaPredicted RBP0.7□□□□□ -2.3
SOX2-OT-219ENST00000593330 SPRR2AP35326 72 aa0.7□□□□□ -2.3
SOX2-OT-219ENST00000593330 SPRR2EP22531 72 aa0.69□□□□□ -2.3
SOX2-OT-219ENST00000593330 MUC17Q685J3 4493 aa0.68□□□□□ -2.3
SOX2-OT-219ENST00000593330 DNAH17Q9UFH2 4485 aa0.67□□□□□ -2.3
SOX2-OT-219ENST00000593330 MT4P47944 62 aa0.67□□□□□ -2.3
SOX2-OT-219ENST00000593330 SPRR2FQ96RM1 72 aa0.66□□□□□ -2.3
SOX2-OT-219ENST00000593330 PHGR1C9JFL3 82 aa0.65□□□□□ -2.31
SOX2-OT-219ENST00000593330 MT1EP04732 61 aa0.6□□□□□ -2.31
SOX2-OT-219ENST00000593330 MT1LQ93083 61 aa0.57□□□□□ -2.32
SOX2-OT-219ENST00000593330 MT1HP80294 61 aa0.56□□□□□ -2.32
SOX2-OT-219ENST00000593330 SPRR2GQ9BYE4 73 aa0.56□□□□□ -2.32
SOX2-OT-219ENST00000593330 MT1XP80297 61 aa0.48□□□□□ -2.33
SOX2-OT-219ENST00000593330 MT1HL1P0DM35 61 aa0.47□□□□□ -2.33
SOX2-OT-219ENST00000593330 KRTAP19-8Q3LI54 63 aa0.46□□□□□ -2.34
SOX2-OT-219ENST00000593330 MT1GP13640 62 aa0.43□□□□□ -2.34
SOX2-OT-219ENST00000593330 KRTAP20-2Q3LI61 65 aa0.42□□□□□ -2.34
SOX2-OT-219ENST00000593330 KRTAP19-7Q3SYF9 63 aa0.41□□□□□ -2.34
SOX2-OT-219ENST00000593330 KRTAP19-2Q3LHN2 52 aa0.37□□□□□ -2.35
SOX2-OT-219ENST00000593330 KRTAP6-1Q3LI64 71 aa0.37□□□□□ -2.35
SOX2-OT-219ENST00000593330 MT2AP02795 61 aa0.36□□□□□ -2.35
SOX2-OT-219ENST00000593330 MT1BP07438 61 aa0.36□□□□□ -2.35
SOX2-OT-219ENST00000593330 MT1MQ8N339 61 aa0.36□□□□□ -2.35
SOX2-OT-219ENST00000593330 MT1FP04733 61 aa0.27□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 58.8 ms