RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 NDUFA1O15239 70 aa1.75□□□□□ -2.13
SMAD4-216ENST00000593223 WFDC10BQ8IUB3 73 aa1.75□□□□□ -2.13
SMAD4-216ENST00000593223 H0YAA0 97 aa1.74□□□□□ -2.13
SMAD4-216ENST00000593223 RHPN1-AS1Q9BWJ2 59 aa1.74□□□□□ -2.13
SMAD4-216ENST00000593223 C6orf48Q9UBA6 75 aa1.74□□□□□ -2.13
SMAD4-216ENST00000593223 PRO0255Q9UI72 69 aa1.74□□□□□ -2.13
SMAD4-216ENST00000593223 C10orf95Q9H7T3 257 aa1.73□□□□□ -2.13
SMAD4-216ENST00000593223 H3BNG1 76 aa1.72□□□□□ -2.13
SMAD4-216ENST00000593223 KRTAP5-10Q6L8G5 202 aa1.72□□□□□ -2.13
SMAD4-216ENST00000593223 SPRR1AP35321 89 aa1.7□□□□□ -2.14
SMAD4-216ENST00000593223 DEFB1P60022 68 aa1.7□□□□□ -2.14
SMAD4-216ENST00000593223 RPL39P5Q59GN2 51 aa1.7□□□□□ -2.14
SMAD4-216ENST00000593223 SPRR2EP22531 72 aa1.69□□□□□ -2.14
SMAD4-216ENST00000593223 SPRR2BP35325 72 aa1.69□□□□□ -2.14
SMAD4-216ENST00000593223 SPRR2AP35326 72 aa1.69□□□□□ -2.14
SMAD4-216ENST00000593223 NOP10Q9NPE3 64 aaKnown RBP1.68□□□□□ -2.14
SMAD4-216ENST00000593223 IAPPP10997 89 aa1.67□□□□□ -2.14
SMAD4-216ENST00000593223 KLK9Q2XQG4 91 aa1.67□□□□□ -2.14
SMAD4-216ENST00000593223 AHNAKQ09666 5890 aaKnown RBP1.67□□□□□ -2.14
SMAD4-216ENST00000593223 MT2AP02795 61 aa1.66□□□□□ -2.14
SMAD4-216ENST00000593223 H1FX-AS1Q4G0G2 97 aa1.66□□□□□ -2.14
SMAD4-216ENST00000593223 LINC01556Q5JQF7 62 aa1.66□□□□□ -2.14
SMAD4-216ENST00000593223 WFDC13Q8IUB5 93 aa1.66□□□□□ -2.14
SMAD4-216ENST00000593223 DEFB105AQ8NG35 78 aa1.66□□□□□ -2.14
SMAD4-216ENST00000593223 MT1FP04733 61 aa1.65□□□□□ -2.15
SMAD4-216ENST00000593223 HTN1P15515 57 aa1.65□□□□□ -2.15
SMAD4-216ENST00000593223 LINC01590Q5TEZ4 76 aa1.64□□□□□ -2.15
SMAD4-216ENST00000593223 SPRR1BP22528 89 aa1.63□□□□□ -2.15
SMAD4-216ENST00000593223 SPRR2DP22532 72 aa1.63□□□□□ -2.15
SMAD4-216ENST00000593223 TMEM167AQ8TBQ9 72 aa1.63□□□□□ -2.15
SMAD4-216ENST00000593223 A0A0D9SG42 100 aa1.62□□□□□ -2.15
SMAD4-216ENST00000593223 IGLV5-48A0A075B6I7 105 aa1.61□□□□□ -2.15
SMAD4-216ENST00000593223 TTTY10Q9BZA0 68 aa1.61□□□□□ -2.15
SMAD4-216ENST00000593223 MUC5BQ9HC84 5762 aaPredicted RBP1.61□□□□□ -2.15
SMAD4-216ENST00000593223 K7EIM0 57 aa1.6□□□□□ -2.15
SMAD4-216ENST00000593223 WT1-ASQ06250 92 aa1.59□□□□□ -2.15
SMAD4-216ENST00000593223 SPRR2FQ96RM1 72 aa1.59□□□□□ -2.15
SMAD4-216ENST00000593223 A8MTW9 85 aa1.58□□□□□ -2.16
SMAD4-216ENST00000593223 PRCDQ00LT1 54 aa1.57□□□□□ -2.16
SMAD4-216ENST00000593223 POLR2KP53803 58 aaKnown RBP1.56□□□□□ -2.16
SMAD4-216ENST00000593223 MUC5ACP98088 5654 aa1.55□□□□□ -2.16
SMAD4-216ENST00000593223 A0A096LNI7 61 aa1.53□□□□□ -2.16
SMAD4-216ENST00000593223 ARHGAP5-AS1Q96IT6 56 aa1.53□□□□□ -2.16
SMAD4-216ENST00000593223 MT4P47944 62 aa1.51□□□□□ -2.17
SMAD4-216ENST00000593223 MMP24-AS1A0A0U1RRL7 71 aa1.49□□□□□ -2.17
SMAD4-216ENST00000593223 RPL39P62891 51 aaKnown RBP1.48□□□□□ -2.17
SMAD4-216ENST00000593223 S4R3F8 94 aa1.48□□□□□ -2.17
SMAD4-216ENST00000593223 PRLHP81277 87 aa1.46□□□□□ -2.18
SMAD4-216ENST00000593223 CLPSL2Q6UWE3 100 aa1.44□□□□□ -2.18
SMAD4-216ENST00000593223 RPL39LQ96EH5 51 aaKnown RBP1.44□□□□□ -2.18
SMAD4-216ENST00000593223 C9orf92A6NGG3 77 aa1.4□□□□□ -2.19
SMAD4-216ENST00000593223 KRTAP8-1Q8IUC2 63 aa1.39□□□□□ -2.19
SMAD4-216ENST00000593223 MT1BP07438 61 aa1.38□□□□□ -2.19
SMAD4-216ENST00000593223 M0QY20 66 aa1.36□□□□□ -2.19
SMAD4-216ENST00000593223 SPINK1P00995 79 aa1.32□□□□□ -2.2
SMAD4-216ENST00000593223 TOMM7Q9P0U1 55 aa1.29□□□□□ -2.2
SMAD4-216ENST00000593223 M0QZ58 72 aa1.26□□□□□ -2.21
SMAD4-216ENST00000593223 RPS29P62273 56 aaKnown RBP1.26□□□□□ -2.21
SMAD4-216ENST00000593223 KRTAP19-8Q3LI54 63 aa1.26□□□□□ -2.21
SMAD4-216ENST00000593223 KRTAP20-2Q3LI61 65 aa1.26□□□□□ -2.21
SMAD4-216ENST00000593223 SYNE1Q8NF91 8797 aaKnown RBP1.25□□□□□ -2.21
SMAD4-216ENST00000593223 SPRR2GQ9BYE4 73 aa1.17□□□□□ -2.22
SMAD4-216ENST00000593223 MT1XP80297 61 aa1.15□□□□□ -2.23
SMAD4-216ENST00000593223 KRTAP19-3Q7Z4W3 81 aa1.13□□□□□ -2.23
SMAD4-216ENST00000593223 TNP1P09430 55 aa1.12□□□□□ -2.23
SMAD4-216ENST00000593223 MT1EP04732 61 aa1.05□□□□□ -2.24
SMAD4-216ENST00000593223 KRTAP19-7Q3SYF9 63 aa1.05□□□□□ -2.24
SMAD4-216ENST00000593223 MT1GP13640 62 aa1.04□□□□□ -2.24
SMAD4-216ENST00000593223 MT1MQ8N339 61 aa1.04□□□□□ -2.24
SMAD4-216ENST00000593223 PHGR1C9JFL3 82 aa1.03□□□□□ -2.24
SMAD4-216ENST00000593223 PRM1P04553 51 aa1.03□□□□□ -2.24
SMAD4-216ENST00000593223 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
SMAD4-216ENST00000593223 MT1LQ93083 61 aa0.92□□□□□ -2.26
SMAD4-216ENST00000593223 KRTAP6-2Q3LI66 62 aa0.88□□□□□ -2.27
SMAD4-216ENST00000593223 KRTAP19-5Q3LI72 72 aa0.88□□□□□ -2.27
SMAD4-216ENST00000593223 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
SMAD4-216ENST00000593223 MT1AP04731 61 aa0.83□□□□□ -2.28
SMAD4-216ENST00000593223 KRTAP6-1Q3LI64 71 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 105.6 ms