RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 NREPQ16612 68 aa2.08□□□□□ -2.08
GAPLINC-202ENST00000579007 S4R3F8 94 aa2.07□□□□□ -2.08
GAPLINC-202ENST00000579007 ACYP2P14621 99 aa2.05□□□□□ -2.08
GAPLINC-202ENST00000579007 A0A087WVE0 104 aa2.04□□□□□ -2.08
GAPLINC-202ENST00000579007 ATP5EP2Q5VTU8 51 aa2.04□□□□□ -2.08
GAPLINC-202ENST00000579007 KRTAP12-2P59991 146 aa2.02□□□□□ -2.09
GAPLINC-202ENST00000579007 LCE3EQ5T5B0 92 aa2.02□□□□□ -2.09
GAPLINC-202ENST00000579007 KRTAP2-3P0C7H8 128 aa2□□□□□ -2.09
GAPLINC-202ENST00000579007 SPRR2EP22531 72 aa2□□□□□ -2.09
GAPLINC-202ENST00000579007 SPRR2BP35325 72 aa2□□□□□ -2.09
GAPLINC-202ENST00000579007 SPRR2AP35326 72 aa2□□□□□ -2.09
GAPLINC-202ENST00000579007 MT1XP80297 61 aa2□□□□□ -2.09
GAPLINC-202ENST00000579007 SPRR2FQ96RM1 72 aa2□□□□□ -2.09
GAPLINC-202ENST00000579007 KRTAP2-4Q9BYR9 128 aa2□□□□□ -2.09
GAPLINC-202ENST00000579007 H0Y9P7 68 aa1.99□□□□□ -2.09
GAPLINC-202ENST00000579007 SPATA8Q6RVD6 105 aa1.99□□□□□ -2.09
GAPLINC-202ENST00000579007 PLAC4Q8WY50 150 aa1.98□□□□□ -2.09
GAPLINC-202ENST00000579007 CRIPTQ9P021 101 aa1.97□□□□□ -2.09
GAPLINC-202ENST00000579007 UBL5Q9BZL1 73 aa1.96□□□□□ -2.1
GAPLINC-202ENST00000579007 H0YAA0 97 aa1.95□□□□□ -2.1
GAPLINC-202ENST00000579007 KRTAP10-7P60409 375 aaPredicted RBP1.95□□□□□ -2.1
GAPLINC-202ENST00000579007 KRTAP8-1Q8IUC2 63 aa1.95□□□□□ -2.1
GAPLINC-202ENST00000579007 TP53AIP1Q9HCN2 124 aa1.95□□□□□ -2.1
GAPLINC-202ENST00000579007 LCE1EQ5T753 118 aa1.94□□□□□ -2.1
GAPLINC-202ENST00000579007 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.94□□□□□ -2.1
GAPLINC-202ENST00000579007 SPRR2DP22532 72 aa1.93□□□□□ -2.1
GAPLINC-202ENST00000579007 KRTAP2-1Q9BYU5 128 aa1.93□□□□□ -2.1
GAPLINC-202ENST00000579007 KRTAP12-1P59990 96 aa1.92□□□□□ -2.1
GAPLINC-202ENST00000579007 KRTAP5-11Q6L8G4 156 aa1.9□□□□□ -2.11
GAPLINC-202ENST00000579007 GPR98Q8WXG9 6306 aa1.88□□□□□ -2.11
GAPLINC-202ENST00000579007 M0QZ58 72 aa1.87□□□□□ -2.11
GAPLINC-202ENST00000579007 A0A1B0GU69 56 aa1.86□□□□□ -2.11
GAPLINC-202ENST00000579007 DSTQ03001 7570 aaKnown RBP1.86□□□□□ -2.11
GAPLINC-202ENST00000579007 LCE3DQ9BYE3 92 aa1.83□□□□□ -2.12
GAPLINC-202ENST00000579007 HMCN1Q96RW7 5635 aa1.82□□□□□ -2.12
GAPLINC-202ENST00000579007 AHNAK2Q8IVF2 5795 aa1.81□□□□□ -2.12
GAPLINC-202ENST00000579007 KRTAP19-7Q3SYF9 63 aa1.8□□□□□ -2.12
GAPLINC-202ENST00000579007 MT1EP04732 61 aa1.78□□□□□ -2.12
GAPLINC-202ENST00000579007 KRTAP12-4P60329 112 aa1.77□□□□□ -2.13
GAPLINC-202ENST00000579007 KRTAP19-3Q7Z4W3 81 aa1.77□□□□□ -2.13
GAPLINC-202ENST00000579007 KRTAP5-1Q6L8H4 278 aa1.71□□□□□ -2.14
GAPLINC-202ENST00000579007 MT4P47944 62 aa1.7□□□□□ -2.14
GAPLINC-202ENST00000579007 KRTAP19-5Q3LI72 72 aa1.7□□□□□ -2.14
GAPLINC-202ENST00000579007 MT1MQ8N339 61 aa1.7□□□□□ -2.14
GAPLINC-202ENST00000579007 KRTAP9-6A8MVA2 160 aa1.69□□□□□ -2.14
GAPLINC-202ENST00000579007 KRTAP5-10Q6L8G5 202 aa1.69□□□□□ -2.14
GAPLINC-202ENST00000579007 KRTAP5-4Q6L8H1 288 aa1.68□□□□□ -2.14
GAPLINC-202ENST00000579007 MT1LQ93083 61 aa1.68□□□□□ -2.14
GAPLINC-202ENST00000579007 KRTAP4-4Q9BYR3 166 aa1.68□□□□□ -2.14
GAPLINC-202ENST00000579007 KRTAP4-3Q9BYR4 195 aa1.68□□□□□ -2.14
GAPLINC-202ENST00000579007 MT1GP13640 62 aa1.67□□□□□ -2.14
GAPLINC-202ENST00000579007 A0A0D9SG42 100 aa1.66□□□□□ -2.14
GAPLINC-202ENST00000579007 C10orf95Q9H7T3 257 aa1.64□□□□□ -2.15
GAPLINC-202ENST00000579007 KRTAP12-3P60328 96 aa1.63□□□□□ -2.15
GAPLINC-202ENST00000579007 LCE3AQ5TA76 89 aa1.63□□□□□ -2.15
GAPLINC-202ENST00000579007 KRTAP5-7Q6L8G8 165 aa1.62□□□□□ -2.15
GAPLINC-202ENST00000579007 OBSCNQ5VST9 7968 aa1.61□□□□□ -2.15
GAPLINC-202ENST00000579007 KRTAP20-2Q3LI61 65 aa1.59□□□□□ -2.15
GAPLINC-202ENST00000579007 KRTAP5-5Q701N2 237 aaPredicted RBP1.59□□□□□ -2.15
GAPLINC-202ENST00000579007 SYNE1Q8NF91 8797 aaKnown RBP1.58□□□□□ -2.16
GAPLINC-202ENST00000579007 TNP1P09430 55 aa1.52□□□□□ -2.17
GAPLINC-202ENST00000579007 MUC5BQ9HC84 5762 aaPredicted RBP1.49□□□□□ -2.17
GAPLINC-202ENST00000579007 AHNAKQ09666 5890 aaKnown RBP1.48□□□□□ -2.17
GAPLINC-202ENST00000579007 MUC5ACP98088 5654 aa1.47□□□□□ -2.17
GAPLINC-202ENST00000579007 KRTAP5-2Q701N4 177 aa1.47□□□□□ -2.17
GAPLINC-202ENST00000579007 KRTAP6-1Q3LI64 71 aa1.44□□□□□ -2.18
GAPLINC-202ENST00000579007 KRTAP5-8O75690 187 aa1.43□□□□□ -2.18
GAPLINC-202ENST00000579007 MT1AP04731 61 aa1.42□□□□□ -2.18
GAPLINC-202ENST00000579007 KRTAP6-2Q3LI66 62 aa1.37□□□□□ -2.19
GAPLINC-202ENST00000579007 LCE1CQ5T751 118 aa1.25□□□□□ -2.21
GAPLINC-202ENST00000579007 LCE1BQ5T7P3 118 aa1.25□□□□□ -2.21
GAPLINC-202ENST00000579007 MUC19Q7Z5P9 8384 aa1□□□□□ -2.25
GAPLINC-202ENST00000579007 PHGR1C9JFL3 82 aa0.96□□□□□ -2.26
GAPLINC-202ENST00000579007 KRTAP21-2Q3LI59 83 aa0.95□□□□□ -2.26
GAPLINC-202ENST00000579007 PRM1P04553 51 aa0.88□□□□□ -2.27
GAPLINC-202ENST00000579007 KRTAP21-1Q3LI58 79 aa0.81□□□□□ -2.28
GAPLINC-202ENST00000579007 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 701.6 ms