RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 LOC101927531A0A1B0GV80 90 aa1.26□□□□□ -2.21
CNOT1-221ENST00000569924 ATP5EP56381 51 aaPredicted RBP1.26□□□□□ -2.21
CNOT1-221ENST00000569924 KLKP1Q107X0 134 aa1.25□□□□□ -2.21
CNOT1-221ENST00000569924 NREPQ16612 68 aa1.25□□□□□ -2.21
CNOT1-221ENST00000569924 K7EQZ3 153 aa1.24□□□□□ -2.21
CNOT1-221ENST00000569924 KRTAP5-8O75690 187 aa1.24□□□□□ -2.21
CNOT1-221ENST00000569924 CRIPTQ9P021 101 aa1.24□□□□□ -2.21
CNOT1-221ENST00000569924 S4R3F8 94 aa1.24□□□□□ -2.21
CNOT1-221ENST00000569924 HCG22E2RYF7 251 aa1.23□□□□□ -2.21
CNOT1-221ENST00000569924 SPRR2EP22531 72 aa1.23□□□□□ -2.21
CNOT1-221ENST00000569924 SPRR2BP35325 72 aa1.23□□□□□ -2.21
CNOT1-221ENST00000569924 SPRR2AP35326 72 aa1.23□□□□□ -2.21
CNOT1-221ENST00000569924 ATXN8Q156A1 80 aa1.23□□□□□ -2.21
CNOT1-221ENST00000569924 SPRR2FQ96RM1 72 aa1.23□□□□□ -2.21
CNOT1-221ENST00000569924 UQCR10Q9UDW1 63 aa1.23□□□□□ -2.21
CNOT1-221ENST00000569924 LCE3AQ5TA76 89 aa1.22□□□□□ -2.21
CNOT1-221ENST00000569924 C20orf197Q8N268 126 aa1.22□□□□□ -2.21
CNOT1-221ENST00000569924 CYP4F30PQ9H0H9 118 aa1.22□□□□□ -2.21
CNOT1-221ENST00000569924 KRTAP12-3P60328 96 aa1.21□□□□□ -2.22
CNOT1-221ENST00000569924 PYY3Q5JQD4 70 aa1.21□□□□□ -2.22
CNOT1-221ENST00000569924 COL5A1-AS1Q5SY13 56 aa1.21□□□□□ -2.22
CNOT1-221ENST00000569924 LINC00208Q96KT6 92 aa1.21□□□□□ -2.22
CNOT1-221ENST00000569924 SPRR2DP22532 72 aa1.2□□□□□ -2.22
CNOT1-221ENST00000569924 KRTAP8-1Q8IUC2 63 aa1.2□□□□□ -2.22
CNOT1-221ENST00000569924 H0YAA0 97 aa1.19□□□□□ -2.22
CNOT1-221ENST00000569924 KRTAP12-4P60329 112 aa1.19□□□□□ -2.22
CNOT1-221ENST00000569924 MT1XP80297 61 aa1.19□□□□□ -2.22
CNOT1-221ENST00000569924 TP53AIP1Q9HCN2 124 aa1.19□□□□□ -2.22
CNOT1-221ENST00000569924 A0A087WVE0 104 aa1.17□□□□□ -2.22
CNOT1-221ENST00000569924 A0A1W2PPM0 123 aa1.17□□□□□ -2.22
CNOT1-221ENST00000569924 NDUFC1O43677 76 aa1.17□□□□□ -2.22
CNOT1-221ENST00000569924 PLAC4Q8WY50 150 aa1.17□□□□□ -2.22
CNOT1-221ENST00000569924 MT-ATP8P03928 68 aa1.16□□□□□ -2.22
CNOT1-221ENST00000569924 UBL5Q9BZL1 73 aa1.16□□□□□ -2.22
CNOT1-221ENST00000569924 TRAV22A0A0B4J277 110 aa1.14□□□□□ -2.23
CNOT1-221ENST00000569924 ACYP1P07311 99 aa1.13□□□□□ -2.23
CNOT1-221ENST00000569924 KRTAP5-5Q701N2 237 aaPredicted RBP1.13□□□□□ -2.23
CNOT1-221ENST00000569924 K7EP34 96 aa1.12□□□□□ -2.23
CNOT1-221ENST00000569924 M0QZ58 72 aa1.12□□□□□ -2.23
CNOT1-221ENST00000569924 ATOX1O00244 68 aa1.12□□□□□ -2.23
CNOT1-221ENST00000569924 SPCS1Q9Y6A9 102 aa1.11□□□□□ -2.23
CNOT1-221ENST00000569924 H0Y9P7 68 aa1.1□□□□□ -2.23
CNOT1-221ENST00000569924 CHKB-CPT1BH3BT56 60 aa1.1□□□□□ -2.23
CNOT1-221ENST00000569924 ACYP2P14621 99 aa1.09□□□□□ -2.23
CNOT1-221ENST00000569924 ATP5EP2Q5VTU8 51 aa1.08□□□□□ -2.24
CNOT1-221ENST00000569924 MT1EP04732 61 aa1.07□□□□□ -2.24
CNOT1-221ENST00000569924 MT4P47944 62 aa1.07□□□□□ -2.24
CNOT1-221ENST00000569924 KRTAP19-7Q3SYF9 63 aa1.07□□□□□ -2.24
CNOT1-221ENST00000569924 KRTAP19-3Q7Z4W3 81 aa1.07□□□□□ -2.24
CNOT1-221ENST00000569924 SERP2Q8N6R1 65 aa1.07□□□□□ -2.24
CNOT1-221ENST00000569924 ETDBQ3ZM63 59 aa1.06□□□□□ -2.24
CNOT1-221ENST00000569924 UQCR11O14957 56 aa1.05□□□□□ -2.24
CNOT1-221ENST00000569924 LINC01558Q9Y6Z2 57 aa1.05□□□□□ -2.24
CNOT1-221ENST00000569924 H7BZZ5 65 aa1.04□□□□□ -2.24
CNOT1-221ENST00000569924 MT1GP13640 62 aa1.04□□□□□ -2.24
CNOT1-221ENST00000569924 LCE1CQ5T751 118 aa1.04□□□□□ -2.24
CNOT1-221ENST00000569924 LCE1BQ5T7P3 118 aa1.04□□□□□ -2.24
CNOT1-221ENST00000569924 LINC00643Q86TS7 51 aa1.03□□□□□ -2.24
CNOT1-221ENST00000569924 KRTAP19-5Q3LI72 72 aa1.02□□□□□ -2.25
CNOT1-221ENST00000569924 MT1MQ8N339 61 aa1.02□□□□□ -2.25
CNOT1-221ENST00000569924 A0A0D9SG42 100 aa1□□□□□ -2.25
CNOT1-221ENST00000569924 MT1LQ93083 61 aa1□□□□□ -2.25
CNOT1-221ENST00000569924 PRR15LQ9BU68 103 aa1□□□□□ -2.25
CNOT1-221ENST00000569924 KRTAP20-2Q3LI61 65 aa0.97□□□□□ -2.25
CNOT1-221ENST00000569924 C10orf95Q9H7T3 257 aa0.95□□□□□ -2.26
CNOT1-221ENST00000569924 SYNE1Q8NF91 8797 aaKnown RBP0.93□□□□□ -2.26
CNOT1-221ENST00000569924 TNP1P09430 55 aa0.93□□□□□ -2.26
CNOT1-221ENST00000569924 SPATA8Q6RVD6 105 aa0.93□□□□□ -2.26
CNOT1-221ENST00000569924 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
CNOT1-221ENST00000569924 MUC19Q7Z5P9 8384 aa0.88□□□□□ -2.27
CNOT1-221ENST00000569924 A0A1B0GU69 56 aa0.87□□□□□ -2.27
CNOT1-221ENST00000569924 MT1AP04731 61 aa0.85□□□□□ -2.27
CNOT1-221ENST00000569924 KRTAP6-1Q3LI64 71 aa0.85□□□□□ -2.27
CNOT1-221ENST00000569924 KRTAP6-2Q3LI66 62 aa0.83□□□□□ -2.28
CNOT1-221ENST00000569924 KRTAP21-2Q3LI59 83 aa0.73□□□□□ -2.29
CNOT1-221ENST00000569924 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
CNOT1-221ENST00000569924 MUC16Q8WXI7 14507 aa0.46□□□□□ -2.34
CNOT1-221ENST00000569924 PRM1P04553 51 aa0.39□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 4.7 ms