RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 KAAG1Q9UBP8 84 aa1.07□□□□□ -2.24
CHD9-220ENST00000569794 AHNAK2Q8IVF2 5795 aa1.07□□□□□ -2.24
CHD9-220ENST00000569794 DSTQ03001 7570 aaKnown RBP1.07□□□□□ -2.24
CHD9-220ENST00000569794 WT1-ASQ06250 92 aa1.06□□□□□ -2.24
CHD9-220ENST00000569794 KRTAP19-6Q3LI70 58 aa1.06□□□□□ -2.24
CHD9-220ENST00000569794 KRTAP19-2Q3LHN2 52 aa1.04□□□□□ -2.24
CHD9-220ENST00000569794 M0R2T5 61 aa1.03□□□□□ -2.24
CHD9-220ENST00000569794 H3BUA1 57 aa1.01□□□□□ -2.25
CHD9-220ENST00000569794 HTN3P15516 51 aa1.01□□□□□ -2.25
CHD9-220ENST00000569794 PRLHP81277 87 aa1□□□□□ -2.25
CHD9-220ENST00000569794 S4R3F8 94 aa1□□□□□ -2.25
CHD9-220ENST00000569794 SPART-AS1P0CW21 52 aa0.99□□□□□ -2.25
CHD9-220ENST00000569794 SPRR2EP22531 72 aa0.99□□□□□ -2.25
CHD9-220ENST00000569794 SPRR2BP35325 72 aa0.99□□□□□ -2.25
CHD9-220ENST00000569794 SPRR2AP35326 72 aa0.99□□□□□ -2.25
CHD9-220ENST00000569794 SMIM2Q9BVW6 85 aa0.99□□□□□ -2.25
CHD9-220ENST00000569794 AHNAKQ09666 5890 aaKnown RBP0.98□□□□□ -2.25
CHD9-220ENST00000569794 WFDC10BQ8IUB3 73 aa0.98□□□□□ -2.25
CHD9-220ENST00000569794 SPRR2DP22532 72 aa0.96□□□□□ -2.26
CHD9-220ENST00000569794 MUC5BQ9HC84 5762 aaPredicted RBP0.93□□□□□ -2.26
CHD9-220ENST00000569794 MT2AP02795 61 aa0.93□□□□□ -2.26
CHD9-220ENST00000569794 LEAP2Q969E1 77 aa0.92□□□□□ -2.26
CHD9-220ENST00000569794 SPRR2FQ96RM1 72 aa0.92□□□□□ -2.26
CHD9-220ENST00000569794 FLGP20930 4061 aaPredicted RBP0.92□□□□□ -2.26
CHD9-220ENST00000569794 MUC5ACP98088 5654 aa0.91□□□□□ -2.26
CHD9-220ENST00000569794 MT1FP04733 61 aa0.91□□□□□ -2.26
CHD9-220ENST00000569794 DEFB131AP59861 70 aa0.9□□□□□ -2.27
CHD9-220ENST00000569794 A0A096LPF7 62 aa0.89□□□□□ -2.27
CHD9-220ENST00000569794 MT4P47944 62 aa0.89□□□□□ -2.27
CHD9-220ENST00000569794 NDUFA1O15239 70 aa0.88□□□□□ -2.27
CHD9-220ENST00000569794 NOP10Q9NPE3 64 aaKnown RBP0.88□□□□□ -2.27
CHD9-220ENST00000569794 H3BNG1 76 aa0.87□□□□□ -2.27
CHD9-220ENST00000569794 PRM1P04553 51 aa0.87□□□□□ -2.27
CHD9-220ENST00000569794 APELAP0DMC3 54 aa0.87□□□□□ -2.27
CHD9-220ENST00000569794 RHPN1-AS1Q9BWJ2 59 aa0.86□□□□□ -2.27
CHD9-220ENST00000569794 IGLV5-48A0A075B6I7 105 aa0.82□□□□□ -2.28
CHD9-220ENST00000569794 LINC01556Q5JQF7 62 aa0.82□□□□□ -2.28
CHD9-220ENST00000569794 DEFB1P60022 68 aa0.81□□□□□ -2.28
CHD9-220ENST00000569794 HTN1P15515 57 aa0.8□□□□□ -2.28
CHD9-220ENST00000569794 RPL39P5Q59GN2 51 aa0.79□□□□□ -2.28
CHD9-220ENST00000569794 KRTAP8-1Q8IUC2 63 aa0.79□□□□□ -2.28
CHD9-220ENST00000569794 MMP24-AS1A0A0U1RRL7 71 aa0.78□□□□□ -2.28
CHD9-220ENST00000569794 TMEM167AQ8TBQ9 72 aa0.77□□□□□ -2.29
CHD9-220ENST00000569794 A0A096LNI7 61 aa0.75□□□□□ -2.29
CHD9-220ENST00000569794 A8MTW9 85 aa0.75□□□□□ -2.29
CHD9-220ENST00000569794 M0QY20 66 aa0.75□□□□□ -2.29
CHD9-220ENST00000569794 K7EIM0 57 aa0.74□□□□□ -2.29
CHD9-220ENST00000569794 MT1BP07438 61 aa0.74□□□□□ -2.29
CHD9-220ENST00000569794 PRCDQ00LT1 54 aa0.74□□□□□ -2.29
CHD9-220ENST00000569794 C9orf92A6NGG3 77 aa0.73□□□□□ -2.29
CHD9-220ENST00000569794 KRTAP20-2Q3LI61 65 aa0.73□□□□□ -2.29
CHD9-220ENST00000569794 SNRPGP62308 76 aaKnown RBP0.72□□□□□ -2.29
CHD9-220ENST00000569794 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
CHD9-220ENST00000569794 SYNE1Q8NF91 8797 aaKnown RBP0.71□□□□□ -2.3
CHD9-220ENST00000569794 LINC01590Q5TEZ4 76 aa0.71□□□□□ -2.3
CHD9-220ENST00000569794 TTTY10Q9BZA0 68 aa0.69□□□□□ -2.3
CHD9-220ENST00000569794 KRTAP19-8Q3LI54 63 aa0.67□□□□□ -2.3
CHD9-220ENST00000569794 CLPSL2Q6UWE3 100 aa0.65□□□□□ -2.31
CHD9-220ENST00000569794 PHGR1C9JFL3 82 aa0.64□□□□□ -2.31
CHD9-220ENST00000569794 POLR2KP53803 58 aaKnown RBP0.64□□□□□ -2.31
CHD9-220ENST00000569794 M0QZ58 72 aa0.63□□□□□ -2.31
CHD9-220ENST00000569794 TNP1P09430 55 aa0.62□□□□□ -2.31
CHD9-220ENST00000569794 ARHGAP5-AS1Q96IT6 56 aa0.62□□□□□ -2.31
CHD9-220ENST00000569794 RPS29P62273 56 aaKnown RBP0.61□□□□□ -2.31
CHD9-220ENST00000569794 SPRR2GQ9BYE4 73 aa0.6□□□□□ -2.31
CHD9-220ENST00000569794 MT1XP80297 61 aa0.59□□□□□ -2.31
CHD9-220ENST00000569794 RPL39P62891 51 aaKnown RBP0.58□□□□□ -2.32
CHD9-220ENST00000569794 MT1GP13640 62 aa0.57□□□□□ -2.32
CHD9-220ENST00000569794 MT1EP04732 61 aa0.55□□□□□ -2.32
CHD9-220ENST00000569794 MT1MQ8N339 61 aa0.55□□□□□ -2.32
CHD9-220ENST00000569794 KRTAP19-7Q3SYF9 63 aa0.54□□□□□ -2.32
CHD9-220ENST00000569794 TOMM7Q9P0U1 55 aa0.53□□□□□ -2.32
CHD9-220ENST00000569794 RPL39LQ96EH5 51 aaKnown RBP0.52□□□□□ -2.33
CHD9-220ENST00000569794 KRTAP6-2Q3LI66 62 aa0.49□□□□□ -2.33
CHD9-220ENST00000569794 MT1LQ93083 61 aa0.46□□□□□ -2.34
CHD9-220ENST00000569794 KRTAP19-5Q3LI72 72 aa0.43□□□□□ -2.34
CHD9-220ENST00000569794 MT1AP04731 61 aa0.42□□□□□ -2.34
CHD9-220ENST00000569794 KRTAP6-1Q3LI64 71 aa0.41□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 131.7 ms