RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 KRTAP5-9P26371 169 aa2.92□□□□□ -1.94
SF3B3-209ENST00000567635 CAMK2N1Q7Z7J9 78 aa2.92□□□□□ -1.94
SF3B3-209ENST00000567635 GPR98Q8WXG9 6306 aa2.92□□□□□ -1.94
SF3B3-209ENST00000567635 M0QZ58 72 aa2.91□□□□□ -1.94
SF3B3-209ENST00000567635 MT1XP80297 61 aa2.9□□□□□ -1.95
SF3B3-209ENST00000567635 KMT2DO14686 5537 aa2.88□□□□□ -1.95
SF3B3-209ENST00000567635 MDN1Q9NU22 5596 aa2.87□□□□□ -1.95
SF3B3-209ENST00000567635 KRTAP2-3P0C7H8 128 aa2.84□□□□□ -1.95
SF3B3-209ENST00000567635 KRTAP12-2P59991 146 aa2.84□□□□□ -1.95
SF3B3-209ENST00000567635 KRTAP2-4Q9BYR9 128 aa2.84□□□□□ -1.95
SF3B3-209ENST00000567635 KRTAP8-1Q8IUC2 63 aa2.83□□□□□ -1.96
SF3B3-209ENST00000567635 SPRR2FQ96RM1 72 aa2.83□□□□□ -1.96
SF3B3-209ENST00000567635 SPRR2EP22531 72 aa2.8□□□□□ -1.96
SF3B3-209ENST00000567635 SPRR2BP35325 72 aa2.8□□□□□ -1.96
SF3B3-209ENST00000567635 SPRR2AP35326 72 aa2.8□□□□□ -1.96
SF3B3-209ENST00000567635 KRTAP13-4Q3LI77 160 aa2.8□□□□□ -1.96
SF3B3-209ENST00000567635 C10orf95Q9H7T3 257 aa2.78□□□□□ -1.96
SF3B3-209ENST00000567635 KRTAP10-7P60409 375 aaPredicted RBP2.76□□□□□ -1.97
SF3B3-209ENST00000567635 KRTAP10-12P60413 245 aa2.76□□□□□ -1.97
SF3B3-209ENST00000567635 LCE1AQ5T7P2 110 aa2.76□□□□□ -1.97
SF3B3-209ENST00000567635 A0A0D9SG42 100 aa2.75□□□□□ -1.97
SF3B3-209ENST00000567635 KRTAP12-1P59990 96 aa2.72□□□□□ -1.97
SF3B3-209ENST00000567635 KRTAP2-2Q9BYT5 123 aa2.72□□□□□ -1.97
SF3B3-209ENST00000567635 KRTAP2-1Q9BYU5 128 aa2.72□□□□□ -1.97
SF3B3-209ENST00000567635 SPRR2DP22532 72 aa2.71□□□□□ -1.98
SF3B3-209ENST00000567635 PP632Q6XCG6 107 aa2.62□□□□□ -1.99
SF3B3-209ENST00000567635 MT3P25713 68 aa2.59□□□□□ -1.99
SF3B3-209ENST00000567635 KRTAP19-7Q3SYF9 63 aa2.59□□□□□ -1.99
SF3B3-209ENST00000567635 DSTQ03001 7570 aaKnown RBP2.59□□□□□ -2
SF3B3-209ENST00000567635 MT1EP04732 61 aa2.56□□□□□ -2
SF3B3-209ENST00000567635 KRTAP19-3Q7Z4W3 81 aa2.55□□□□□ -2
SF3B3-209ENST00000567635 KRTAP19-5Q3LI72 72 aa2.53□□□□□ -2
SF3B3-209ENST00000567635 INE1O15225 51 aa2.52□□□□□ -2.01
SF3B3-209ENST00000567635 MT1GP13640 62 aa2.51□□□□□ -2.01
SF3B3-209ENST00000567635 TNP1P09430 55 aa2.5□□□□□ -2.01
SF3B3-209ENST00000567635 SPRR5A0A1B0GTR4 108 aa2.47□□□□□ -2.01
SF3B3-209ENST00000567635 LCE3AQ5TA76 89 aa2.46□□□□□ -2.02
SF3B3-209ENST00000567635 HMCN1Q96RW7 5635 aa2.45□□□□□ -2.02
SF3B3-209ENST00000567635 MT1LQ93083 61 aa2.45□□□□□ -2.02
SF3B3-209ENST00000567635 AHNAK2Q8IVF2 5795 aa2.44□□□□□ -2.02
SF3B3-209ENST00000567635 MT1MQ8N339 61 aa2.44□□□□□ -2.02
SF3B3-209ENST00000567635 KRTAP4-3Q9BYR4 195 aa2.4□□□□□ -2.03
SF3B3-209ENST00000567635 KRTAP12-3P60328 96 aa2.38□□□□□ -2.03
SF3B3-209ENST00000567635 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
SF3B3-209ENST00000567635 KRTAP5-10Q6L8G5 202 aa2.38□□□□□ -2.03
SF3B3-209ENST00000567635 MT4P47944 62 aa2.36□□□□□ -2.03
SF3B3-209ENST00000567635 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
SF3B3-209ENST00000567635 KRTAP5-4Q6L8H1 288 aa2.34□□□□□ -2.03
SF3B3-209ENST00000567635 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
SF3B3-209ENST00000567635 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
SF3B3-209ENST00000567635 KRTAP5-5Q701N2 237 aaPredicted RBP2.23□□□□□ -2.05
SF3B3-209ENST00000567635 KRTAP12-4P60329 112 aa2.22□□□□□ -2.05
SF3B3-209ENST00000567635 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
SF3B3-209ENST00000567635 KRTAP20-2Q3LI61 65 aa2.2□□□□□ -2.06
SF3B3-209ENST00000567635 LCE3CQ5T5A8 94 aa2.2□□□□□ -2.06
SF3B3-209ENST00000567635 LCE1FQ5T754 118 aa2.18□□□□□ -2.06
SF3B3-209ENST00000567635 MUC5ACP98088 5654 aa2.13□□□□□ -2.07
SF3B3-209ENST00000567635 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
SF3B3-209ENST00000567635 MT1AP04731 61 aa2.09□□□□□ -2.07
SF3B3-209ENST00000567635 KRTAP9-6A8MVA2 160 aa2.08□□□□□ -2.08
SF3B3-209ENST00000567635 KRTAP6-1Q3LI64 71 aa2.08□□□□□ -2.08
SF3B3-209ENST00000567635 KRTAP5-2Q701N4 177 aa2.04□□□□□ -2.08
SF3B3-209ENST00000567635 SYNE1Q8NF91 8797 aaKnown RBP2.03□□□□□ -2.08
SF3B3-209ENST00000567635 KRTAP6-2Q3LI66 62 aa1.99□□□□□ -2.09
SF3B3-209ENST00000567635 KRTAP5-1Q6L8H4 278 aa1.97□□□□□ -2.09
SF3B3-209ENST00000567635 KRTAP5-8O75690 187 aa1.95□□□□□ -2.1
SF3B3-209ENST00000567635 KRTAP4-4Q9BYR3 166 aa1.86□□□□□ -2.11
SF3B3-209ENST00000567635 OBSCNQ5VST9 7968 aa1.85□□□□□ -2.11
SF3B3-209ENST00000567635 LCE3EQ5T5B0 92 aa1.85□□□□□ -2.11
SF3B3-209ENST00000567635 LCE1BQ5T7P3 118 aa1.66□□□□□ -2.14
SF3B3-209ENST00000567635 LCE1CQ5T751 118 aa1.64□□□□□ -2.15
SF3B3-209ENST00000567635 LCE3DQ9BYE3 92 aa1.61□□□□□ -2.15
SF3B3-209ENST00000567635 PRM1P04553 51 aa1.59□□□□□ -2.15
SF3B3-209ENST00000567635 PHGR1C9JFL3 82 aa1.4□□□□□ -2.19
SF3B3-209ENST00000567635 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
SF3B3-209ENST00000567635 MUC19Q7Z5P9 8384 aa1.21□□□□□ -2.22
SF3B3-209ENST00000567635 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
SF3B3-209ENST00000567635 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 8.4 ms