RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 PRO1854Q9UHT4 67 aa2.04□□□□□ -2.08
UBR1-203ENST00000562173 DNAL4O96015 105 aa2.03□□□□□ -2.08
UBR1-203ENST00000562173 TMEM254Q8TBM7 123 aa2.03□□□□□ -2.08
UBR1-203ENST00000562173 KRTAP19-7Q3SYF9 63 aa2.02□□□□□ -2.09
UBR1-203ENST00000562173 H0YGX0 51 aa2.01□□□□□ -2.09
UBR1-203ENST00000562173 ORMDL1Q9P0S3 153 aa2.01□□□□□ -2.09
UBR1-203ENST00000562173 MT-ATP8P03928 68 aa2□□□□□ -2.09
UBR1-203ENST00000562173 ACYP1P07311 99 aa2□□□□□ -2.09
UBR1-203ENST00000562173 HCG22E2RYF7 251 aa1.99□□□□□ -2.09
UBR1-203ENST00000562173 MT1EP04732 61 aa1.99□□□□□ -2.09
UBR1-203ENST00000562173 ETDBQ3ZM63 59 aa1.99□□□□□ -2.09
UBR1-203ENST00000562173 DSCR8Q96T75 97 aa1.99□□□□□ -2.09
UBR1-203ENST00000562173 NDUFB1O75438 58 aa1.98□□□□□ -2.09
UBR1-203ENST00000562173 Q1T7F1 81 aa1.98□□□□□ -2.09
UBR1-203ENST00000562173 KRTAP19-3Q7Z4W3 81 aa1.98□□□□□ -2.09
UBR1-203ENST00000562173 JMJD7-PLA2G4BH0Y9G9 81 aa1.96□□□□□ -2.1
UBR1-203ENST00000562173 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
UBR1-203ENST00000562173 PLAC4Q8WY50 150 aa1.96□□□□□ -2.1
UBR1-203ENST00000562173 CASC2Q6XLA1 102 aa1.95□□□□□ -2.1
UBR1-203ENST00000562173 CYSTM1Q9H1C7 97 aa1.95□□□□□ -2.1
UBR1-203ENST00000562173 H0YAA0 97 aa1.94□□□□□ -2.1
UBR1-203ENST00000562173 PDE6GP18545 87 aa1.94□□□□□ -2.1
UBR1-203ENST00000562173 LINC00643Q86TS7 51 aa1.94□□□□□ -2.1
UBR1-203ENST00000562173 UBL5Q9BZL1 73 aa1.94□□□□□ -2.1
UBR1-203ENST00000562173 CRIPTQ9P021 101 aa1.94□□□□□ -2.1
UBR1-203ENST00000562173 ATP5EP2Q5VTU8 51 aa1.93□□□□□ -2.1
UBR1-203ENST00000562173 ATOX1O00244 68 aa1.92□□□□□ -2.1
UBR1-203ENST00000562173 MT1MQ8N339 61 aa1.92□□□□□ -2.1
UBR1-203ENST00000562173 COX7CP15954 63 aa1.91□□□□□ -2.1
UBR1-203ENST00000562173 MIR22HGQ0VDD5 57 aa1.91□□□□□ -2.1
UBR1-203ENST00000562173 M0QZ58 72 aa1.9□□□□□ -2.11
UBR1-203ENST00000562173 KRTAP20-2Q3LI61 65 aa1.9□□□□□ -2.11
UBR1-203ENST00000562173 SERP1Q9Y6X1 66 aa1.9□□□□□ -2.11
UBR1-203ENST00000562173 NREPQ16612 68 aa1.89□□□□□ -2.11
UBR1-203ENST00000562173 KRTAP19-5Q3LI72 72 aa1.89□□□□□ -2.11
UBR1-203ENST00000562173 LOC110117498A0A087WWA1 95 aa1.88□□□□□ -2.11
UBR1-203ENST00000562173 COA5Q86WW8 74 aa1.88□□□□□ -2.11
UBR1-203ENST00000562173 NDUFC1O43677 76 aa1.86□□□□□ -2.11
UBR1-203ENST00000562173 SERP2Q8N6R1 65 aa1.86□□□□□ -2.11
UBR1-203ENST00000562173 SYNE1Q8NF91 8797 aaKnown RBP1.86□□□□□ -2.11
UBR1-203ENST00000562173 ATP5EP56381 51 aaPredicted RBP1.85□□□□□ -2.11
UBR1-203ENST00000562173 MT1LQ93083 61 aa1.85□□□□□ -2.11
UBR1-203ENST00000562173 AHNAKQ09666 5890 aaKnown RBP1.84□□□□□ -2.11
UBR1-203ENST00000562173 CYP4F30PQ9H0H9 118 aa1.84□□□□□ -2.11
UBR1-203ENST00000562173 MT1GP13640 62 aa1.83□□□□□ -2.12
UBR1-203ENST00000562173 MUC5ACP98088 5654 aa1.81□□□□□ -2.12
UBR1-203ENST00000562173 INE1O15225 51 aa1.81□□□□□ -2.12
UBR1-203ENST00000562173 C20orf197Q8N268 126 aa1.81□□□□□ -2.12
UBR1-203ENST00000562173 CDC42SE1Q9NRR8 79 aa1.81□□□□□ -2.12
UBR1-203ENST00000562173 DMAC1Q96GE9 116 aa1.79□□□□□ -2.12
UBR1-203ENST00000562173 SNURFQ9Y675 71 aa1.79□□□□□ -2.12
UBR1-203ENST00000562173 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
UBR1-203ENST00000562173 H7BZZ5 65 aa1.78□□□□□ -2.12
UBR1-203ENST00000562173 KRTAP13-4Q3LI77 160 aa1.78□□□□□ -2.12
UBR1-203ENST00000562173 TP53AIP1Q9HCN2 124 aa1.77□□□□□ -2.13
UBR1-203ENST00000562173 A0A0D9SG42 100 aa1.75□□□□□ -2.13
UBR1-203ENST00000562173 H0Y9P7 68 aa1.74□□□□□ -2.13
UBR1-203ENST00000562173 KRTAP12-1P59990 96 aa1.74□□□□□ -2.13
UBR1-203ENST00000562173 TRAV22A0A0B4J277 110 aa1.72□□□□□ -2.13
UBR1-203ENST00000562173 LINC00208Q96KT6 92 aa1.72□□□□□ -2.13
UBR1-203ENST00000562173 CHKB-CPT1BH3BT56 60 aa1.71□□□□□ -2.14
UBR1-203ENST00000562173 PRR15LQ9BU68 103 aa1.71□□□□□ -2.14
UBR1-203ENST00000562173 C10orf95Q9H7T3 257 aa1.71□□□□□ -2.14
UBR1-203ENST00000562173 LOC101927531A0A1B0GV80 90 aa1.7□□□□□ -2.14
UBR1-203ENST00000562173 SPTSSBQ8NFR3 76 aa1.69□□□□□ -2.14
UBR1-203ENST00000562173 ACYP2P14621 99 aa1.68□□□□□ -2.14
UBR1-203ENST00000562173 KRTAP6-1Q3LI64 71 aa1.64□□□□□ -2.15
UBR1-203ENST00000562173 A0A1B0GU69 56 aa1.62□□□□□ -2.15
UBR1-203ENST00000562173 LINC01558Q9Y6Z2 57 aa1.61□□□□□ -2.15
UBR1-203ENST00000562173 UQCR11O14957 56 aa1.6□□□□□ -2.15
UBR1-203ENST00000562173 KRTAP6-2Q3LI66 62 aa1.59□□□□□ -2.15
UBR1-203ENST00000562173 SPATA8Q6RVD6 105 aa1.57□□□□□ -2.16
UBR1-203ENST00000562173 MT1AP04731 61 aa1.53□□□□□ -2.16
UBR1-203ENST00000562173 TNP1P09430 55 aa1.41□□□□□ -2.18
UBR1-203ENST00000562173 PHGR1C9JFL3 82 aa1.27□□□□□ -2.21
UBR1-203ENST00000562173 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
UBR1-203ENST00000562173 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
UBR1-203ENST00000562173 PRM1P04553 51 aa0.72□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 36.6 ms