RNA–Protein interactions for RNA: ENST00000560667.5

IDH3A-220, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 5

Gene IDH3A, Length 2,110 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-220ENST00000560667 KRTAP19-6Q3LI70 58 aa3.09□□□□□ -1.91
IDH3A-220ENST00000560667 KRTAP23-1A1A580 65 aa3.03□□□□□ -1.92
IDH3A-220ENST00000560667 KRTAP6-3Q3LI67 103 aa3.03□□□□□ -1.92
IDH3A-220ENST00000560667 KRTAP10-7P60409 375 aaPredicted RBP3.02□□□□□ -1.93
IDH3A-220ENST00000560667 NEBP20929 6669 aa2.97□□□□□ -1.93
IDH3A-220ENST00000560667 MUC12Q9UKN1 5478 aa2.95□□□□□ -1.94
IDH3A-220ENST00000560667 PRO2289Q9P1D8 64 aa2.93□□□□□ -1.94
IDH3A-220ENST00000560667 TNP1P09430 55 aa2.93□□□□□ -1.94
IDH3A-220ENST00000560667 LCE3AQ5TA76 89 aa2.9□□□□□ -1.94
IDH3A-220ENST00000560667 KRTAP10-12P60413 245 aa2.9□□□□□ -1.95
IDH3A-220ENST00000560667 KRTAP20-1Q3LI63 56 aa2.87□□□□□ -1.95
IDH3A-220ENST00000560667 MDN1Q9NU22 5596 aa2.87□□□□□ -1.95
IDH3A-220ENST00000560667 PP632Q6XCG6 107 aa2.85□□□□□ -1.95
IDH3A-220ENST00000560667 KRTAP5-9P26371 169 aa2.84□□□□□ -1.96
IDH3A-220ENST00000560667 KRTAP19-5Q3LI72 72 aa2.81□□□□□ -1.96
IDH3A-220ENST00000560667 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.81□□□□□ -1.96
IDH3A-220ENST00000560667 KRTAP19-7Q3SYF9 63 aa2.78□□□□□ -1.96
IDH3A-220ENST00000560667 KRTAP8-1Q8IUC2 63 aa2.78□□□□□ -1.96
IDH3A-220ENST00000560667 KRTAP19-4Q3LI73 84 aa2.77□□□□□ -1.97
IDH3A-220ENST00000560667 SPRR5A0A1B0GTR4 108 aa2.76□□□□□ -1.97
IDH3A-220ENST00000560667 INE1O15225 51 aa2.76□□□□□ -1.97
IDH3A-220ENST00000560667 KRTAP2-3P0C7H8 128 aa2.76□□□□□ -1.97
IDH3A-220ENST00000560667 KRTAP2-4Q9BYR9 128 aa2.76□□□□□ -1.97
IDH3A-220ENST00000560667 KRTAP12-3P60328 96 aa2.75□□□□□ -1.97
IDH3A-220ENST00000560667 SPRR2FQ96RM1 72 aa2.74□□□□□ -1.97
IDH3A-220ENST00000560667 DSTQ03001 7570 aaKnown RBP2.74□□□□□ -1.97
IDH3A-220ENST00000560667 LCE5AQ5TCM9 118 aa2.74□□□□□ -1.97
IDH3A-220ENST00000560667 SPRR2EP22531 72 aa2.72□□□□□ -1.97
IDH3A-220ENST00000560667 SPRR2BP35325 72 aa2.72□□□□□ -1.97
IDH3A-220ENST00000560667 SPRR2AP35326 72 aa2.72□□□□□ -1.97
IDH3A-220ENST00000560667 MT1EP04732 61 aa2.7□□□□□ -1.98
IDH3A-220ENST00000560667 GPR98Q8WXG9 6306 aa2.69□□□□□ -1.98
IDH3A-220ENST00000560667 LCE4AQ5TA78 99 aa2.67□□□□□ -1.98
IDH3A-220ENST00000560667 KRTAP2-2Q9BYT5 123 aa2.67□□□□□ -1.98
IDH3A-220ENST00000560667 KRTAP2-1Q9BYU5 128 aa2.67□□□□□ -1.98
IDH3A-220ENST00000560667 LCE1AQ5T7P2 110 aa2.66□□□□□ -1.98
IDH3A-220ENST00000560667 MT1LQ93083 61 aa2.64□□□□□ -1.99
IDH3A-220ENST00000560667 SPRR2DP22532 72 aa2.63□□□□□ -1.99
IDH3A-220ENST00000560667 KRTAP4-3Q9BYR4 195 aa2.62□□□□□ -1.99
IDH3A-220ENST00000560667 KRTAP19-3Q7Z4W3 81 aa2.58□□□□□ -2
IDH3A-220ENST00000560667 LCE3CQ5T5A8 94 aa2.57□□□□□ -2
IDH3A-220ENST00000560667 MT1MQ8N339 61 aa2.55□□□□□ -2
IDH3A-220ENST00000560667 KRTAP9-6A8MVA2 160 aa2.54□□□□□ -2
IDH3A-220ENST00000560667 MT1GP13640 62 aa2.54□□□□□ -2
IDH3A-220ENST00000560667 KRTAP5-4Q6L8H1 288 aa2.42□□□□□ -2.02
IDH3A-220ENST00000560667 SYNE1Q8NF91 8797 aaKnown RBP2.4□□□□□ -2.03
IDH3A-220ENST00000560667 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
IDH3A-220ENST00000560667 AHNAK2Q8IVF2 5795 aa2.33□□□□□ -2.04
IDH3A-220ENST00000560667 MT4P47944 62 aa2.33□□□□□ -2.04
IDH3A-220ENST00000560667 KRTAP5-5Q701N2 237 aaPredicted RBP2.3□□□□□ -2.04
IDH3A-220ENST00000560667 KRTAP5-10Q6L8G5 202 aa2.3□□□□□ -2.04
IDH3A-220ENST00000560667 KRTAP6-1Q3LI64 71 aa2.27□□□□□ -2.05
IDH3A-220ENST00000560667 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
IDH3A-220ENST00000560667 OBSCNQ5VST9 7968 aa2.25□□□□□ -2.05
IDH3A-220ENST00000560667 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
IDH3A-220ENST00000560667 MT1AP04731 61 aa2.2□□□□□ -2.06
IDH3A-220ENST00000560667 KRTAP5-1Q6L8H4 278 aa2.2□□□□□ -2.06
IDH3A-220ENST00000560667 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
IDH3A-220ENST00000560667 KRTAP5-8O75690 187 aa2.17□□□□□ -2.06
IDH3A-220ENST00000560667 KRTAP20-2Q3LI61 65 aa2.13□□□□□ -2.07
IDH3A-220ENST00000560667 KRTAP6-2Q3LI66 62 aa2.09□□□□□ -2.07
IDH3A-220ENST00000560667 KRTAP12-4P60329 112 aa2.09□□□□□ -2.08
IDH3A-220ENST00000560667 KRTAP5-11Q6L8G4 156 aa2.06□□□□□ -2.08
IDH3A-220ENST00000560667 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
IDH3A-220ENST00000560667 MUC5ACP98088 5654 aa1.99□□□□□ -2.09
IDH3A-220ENST00000560667 MT3P25713 68 aa1.99□□□□□ -2.09
IDH3A-220ENST00000560667 LCE1FQ5T754 118 aa1.94□□□□□ -2.1
IDH3A-220ENST00000560667 LCE3DQ9BYE3 92 aa1.92□□□□□ -2.1
IDH3A-220ENST00000560667 LCE3EQ5T5B0 92 aa1.84□□□□□ -2.11
IDH3A-220ENST00000560667 LCE1EQ5T753 118 aa1.8□□□□□ -2.12
IDH3A-220ENST00000560667 LCE1BQ5T7P3 118 aa1.71□□□□□ -2.14
IDH3A-220ENST00000560667 PRM1P04553 51 aa1.7□□□□□ -2.14
IDH3A-220ENST00000560667 LCE1CQ5T751 118 aa1.62□□□□□ -2.15
IDH3A-220ENST00000560667 KRTAP21-2Q3LI59 83 aa1.48□□□□□ -2.17
IDH3A-220ENST00000560667 MUC19Q7Z5P9 8384 aa1.34□□□□□ -2.2
IDH3A-220ENST00000560667 PHGR1C9JFL3 82 aa1.33□□□□□ -2.2
IDH3A-220ENST00000560667 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
IDH3A-220ENST00000560667 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 109.2 ms