RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 NDUFA1O15239 70 aa1.68□□□□□ -2.14
LRRC28-205ENST00000558248 MT2AP02795 61 aa1.68□□□□□ -2.14
LRRC28-205ENST00000558248 PLNP26678 52 aa1.68□□□□□ -2.14
LRRC28-205ENST00000558248 NREPQ16612 68 aa1.68□□□□□ -2.14
LRRC28-205ENST00000558248 FLGP20930 4061 aaPredicted RBP1.68□□□□□ -2.14
LRRC28-205ENST00000558248 Q8IZM0 81 aa1.67□□□□□ -2.14
LRRC28-205ENST00000558248 MT1FP04733 61 aa1.66□□□□□ -2.14
LRRC28-205ENST00000558248 LINC00158P58513 81 aa1.66□□□□□ -2.14
LRRC28-205ENST00000558248 C6orf48Q9UBA6 75 aa1.66□□□□□ -2.14
LRRC28-205ENST00000558248 KMT2DO14686 5537 aa1.65□□□□□ -2.14
LRRC28-205ENST00000558248 COX7BP24311 80 aa1.64□□□□□ -2.15
LRRC28-205ENST00000558248 KRTAP2-1Q9BYU5 128 aa1.64□□□□□ -2.15
LRRC28-205ENST00000558248 KRTAP13-1Q8IUC0 172 aa1.63□□□□□ -2.15
LRRC28-205ENST00000558248 MUC12Q9UKN1 5478 aa1.63□□□□□ -2.15
LRRC28-205ENST00000558248 C9orf92A6NGG3 77 aa1.62□□□□□ -2.15
LRRC28-205ENST00000558248 SPINK1P00995 79 aa1.62□□□□□ -2.15
LRRC28-205ENST00000558248 UBL5Q9BZL1 73 aa1.62□□□□□ -2.15
LRRC28-205ENST00000558248 GPR98Q8WXG9 6306 aa1.61□□□□□ -2.15
LRRC28-205ENST00000558248 LINC00308Q8TCZ7 52 aa1.61□□□□□ -2.15
LRRC28-205ENST00000558248 ETDCA0A1B0GVM5 59 aa1.6□□□□□ -2.15
LRRC28-205ENST00000558248 PRLHP81277 87 aa1.6□□□□□ -2.15
LRRC28-205ENST00000558248 RPS29P62273 56 aaKnown RBP1.58□□□□□ -2.16
LRRC28-205ENST00000558248 CRIPTQ9P021 101 aa1.58□□□□□ -2.16
LRRC28-205ENST00000558248 DEFB105AQ8NG35 78 aa1.57□□□□□ -2.16
LRRC28-205ENST00000558248 KCNQ1DNQ9H478 68 aa1.57□□□□□ -2.16
LRRC28-205ENST00000558248 SPRR2EP22531 72 aa1.56□□□□□ -2.16
LRRC28-205ENST00000558248 SPRR2BP35325 72 aa1.56□□□□□ -2.16
LRRC28-205ENST00000558248 SPRR2AP35326 72 aa1.56□□□□□ -2.16
LRRC28-205ENST00000558248 SPRR1AP35321 89 aa1.55□□□□□ -2.16
LRRC28-205ENST00000558248 TP53AIP1Q9HCN2 124 aa1.55□□□□□ -2.16
LRRC28-205ENST00000558248 H0YGX0 51 aa1.54□□□□□ -2.16
LRRC28-205ENST00000558248 KRTAP12-3P60328 96 aa1.54□□□□□ -2.16
LRRC28-205ENST00000558248 KRTAP12-4P60329 112 aa1.54□□□□□ -2.16
LRRC28-205ENST00000558248 MDN1Q9NU22 5596 aa1.52□□□□□ -2.17
LRRC28-205ENST00000558248 SPRR2FQ96RM1 72 aa1.51□□□□□ -2.17
LRRC28-205ENST00000558248 IGLV5-48A0A075B6I7 105 aa1.5□□□□□ -2.17
LRRC28-205ENST00000558248 SPRR1BP22528 89 aa1.5□□□□□ -2.17
LRRC28-205ENST00000558248 SPRR2DP22532 72 aa1.5□□□□□ -2.17
LRRC28-205ENST00000558248 KRTAP21-2Q3LI59 83 aa1.48□□□□□ -2.17
LRRC28-205ENST00000558248 C10orf95Q9H7T3 257 aa1.48□□□□□ -2.17
LRRC28-205ENST00000558248 K7EQZ3 153 aa1.47□□□□□ -2.17
LRRC28-205ENST00000558248 MT1BP07438 61 aa1.45□□□□□ -2.18
LRRC28-205ENST00000558248 MRPL34Q9BQ48 92 aaKnown RBP1.45□□□□□ -2.18
LRRC28-205ENST00000558248 KRTAP5-10Q6L8G5 202 aa1.44□□□□□ -2.18
LRRC28-205ENST00000558248 DSTQ03001 7570 aaKnown RBP1.44□□□□□ -2.18
LRRC28-205ENST00000558248 A0A0D9SG42 100 aa1.42□□□□□ -2.18
LRRC28-205ENST00000558248 WFDC13Q8IUB5 93 aa1.4□□□□□ -2.19
LRRC28-205ENST00000558248 KRTAP8-1Q8IUC2 63 aa1.4□□□□□ -2.19
LRRC28-205ENST00000558248 KRTAP19-8Q3LI54 63 aa1.39□□□□□ -2.19
LRRC28-205ENST00000558248 MMP24-AS1A0A0U1RRL7 71 aa1.38□□□□□ -2.19
LRRC28-205ENST00000558248 AHNAK2Q8IVF2 5795 aa1.37□□□□□ -2.19
LRRC28-205ENST00000558248 MT4P47944 62 aa1.35□□□□□ -2.19
LRRC28-205ENST00000558248 SPRR2GQ9BYE4 73 aa1.34□□□□□ -2.19
LRRC28-205ENST00000558248 MT1XP80297 61 aa1.29□□□□□ -2.2
LRRC28-205ENST00000558248 H1FX-AS1Q4G0G2 97 aa1.29□□□□□ -2.2
LRRC28-205ENST00000558248 S4R3F8 94 aa1.27□□□□□ -2.21
LRRC28-205ENST00000558248 H0YAA0 97 aa1.26□□□□□ -2.21
LRRC28-205ENST00000558248 AHNAKQ09666 5890 aaKnown RBP1.23□□□□□ -2.21
LRRC28-205ENST00000558248 KRTAP19-3Q7Z4W3 81 aa1.2□□□□□ -2.22
LRRC28-205ENST00000558248 KRTAP20-2Q3LI61 65 aa1.19□□□□□ -2.22
LRRC28-205ENST00000558248 MUC5ACP98088 5654 aa1.19□□□□□ -2.22
LRRC28-205ENST00000558248 M0QZ58 72 aa1.17□□□□□ -2.22
LRRC28-205ENST00000558248 KRTAP19-7Q3SYF9 63 aa1.16□□□□□ -2.22
LRRC28-205ENST00000558248 MUC5BQ9HC84 5762 aaPredicted RBP1.16□□□□□ -2.22
LRRC28-205ENST00000558248 MT1EP04732 61 aa1.15□□□□□ -2.23
LRRC28-205ENST00000558248 MT1GP13640 62 aa1.15□□□□□ -2.23
LRRC28-205ENST00000558248 MT1MQ8N339 61 aa1.12□□□□□ -2.23
LRRC28-205ENST00000558248 KRTAP19-5Q3LI72 72 aa1.06□□□□□ -2.24
LRRC28-205ENST00000558248 SYNE1Q8NF91 8797 aaKnown RBP1.06□□□□□ -2.24
LRRC28-205ENST00000558248 MT1LQ93083 61 aa1.05□□□□□ -2.24
LRRC28-205ENST00000558248 TNP1P09430 55 aa1.02□□□□□ -2.25
LRRC28-205ENST00000558248 KRTAP6-2Q3LI66 62 aa0.93□□□□□ -2.26
LRRC28-205ENST00000558248 KRTAP6-1Q3LI64 71 aa0.92□□□□□ -2.26
LRRC28-205ENST00000558248 MT1AP04731 61 aa0.89□□□□□ -2.27
LRRC28-205ENST00000558248 PHGR1C9JFL3 82 aa0.85□□□□□ -2.27
LRRC28-205ENST00000558248 PRM1P04553 51 aa0.81□□□□□ -2.28
LRRC28-205ENST00000558248 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
LRRC28-205ENST00000558248 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 48.3 ms