RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 S100ZQ8WXG8 99 aa-5.66□□□□□ -3.32
LINC00648-203ENST00000556923 DCAF1Q9Y4B6 1507 aa-5.66□□□□□ -3.32
LINC00648-203ENST00000556923 ATXN8Q156A1 80 aa-5.67□□□□□ -3.32
LINC00648-203ENST00000556923 NCMAPQ5T1S8 102 aa-5.7□□□□□ -3.32
LINC00648-203ENST00000556923 TRPM2O94759 1503 aa-5.7□□□□□ -3.32
LINC00648-203ENST00000556923 UGGT1Q9NYU2 1555 aa-5.71□□□□□ -3.32
LINC00648-203ENST00000556923 IGIPA6NJ69 53 aa-5.71□□□□□ -3.32
LINC00648-203ENST00000556923 TDRG1Q3Y452 100 aa-5.71□□□□□ -3.32
LINC00648-203ENST00000556923 CFAP74Q9C0B2 1584 aa-5.72□□□□□ -3.32
LINC00648-203ENST00000556923 KANTRA0A1W2PQU2 76 aa-5.72□□□□□ -3.33
LINC00648-203ENST00000556923 H0YGX0 51 aa-5.73□□□□□ -3.33
LINC00648-203ENST00000556923 SERF2P84101 59 aa-5.73□□□□□ -3.33
LINC00648-203ENST00000556923 S100A16Q96FQ6 103 aaKnown RBP-5.73□□□□□ -3.33
LINC00648-203ENST00000556923 PDCD5O14737 125 aa-5.75□□□□□ -3.33
LINC00648-203ENST00000556923 PRXQ9BXM0 1461 aa-5.76□□□□□ -3.33
LINC00648-203ENST00000556923 ABCA6Q8N139 1617 aa-5.81□□□□□ -3.34
LINC00648-203ENST00000556923 NDUFA1O15239 70 aa-5.81□□□□□ -3.34
LINC00648-203ENST00000556923 PYY3Q5JQD4 70 aa-5.81□□□□□ -3.34
LINC00648-203ENST00000556923 DUOX1Q9NRD9 1551 aa-5.82□□□□□ -3.34
LINC00648-203ENST00000556923 LINC01549A6NIU2 74 aa-5.84□□□□□ -3.34
LINC00648-203ENST00000556923 APELAP0DMC3 54 aa-5.84□□□□□ -3.34
LINC00648-203ENST00000556923 ST20Q9HBF5 79 aa-5.86□□□□□ -3.35
LINC00648-203ENST00000556923 C14orf144Q96I85 54 aa-5.87□□□□□ -3.35
LINC00648-203ENST00000556923 TOP2AP11388 1531 aaKnown RBP-5.89□□□□□ -3.35
LINC00648-203ENST00000556923 HILPDAQ9Y5L2 63 aa-5.9□□□□□ -3.35
LINC00648-203ENST00000556923 CNTLNQ9NXG0 1405 aa-5.91□□□□□ -3.35
LINC00648-203ENST00000556923 GNG13Q9P2W3 67 aa-5.91□□□□□ -3.36
LINC00648-203ENST00000556923 PLNP26678 52 aa-5.94□□□□□ -3.36
LINC00648-203ENST00000556923 ABCA5Q8WWZ7 1642 aa-5.95□□□□□ -3.36
LINC00648-203ENST00000556923 A0A096LPF7 62 aa-5.95□□□□□ -3.36
LINC00648-203ENST00000556923 ABCA9Q8IUA7 1624 aa-5.96□□□□□ -3.36
LINC00648-203ENST00000556923 IQGAP1P46940 1657 aa-5.97□□□□□ -3.36
LINC00648-203ENST00000556923 H3BUX3 64 aa-5.98□□□□□ -3.37
LINC00648-203ENST00000556923 HTN3P15516 51 aa-5.99□□□□□ -3.37
LINC00648-203ENST00000556923 IQGAP3Q86VI3 1631 aa-6□□□□□ -3.37
LINC00648-203ENST00000556923 ATP7AQ04656 1500 aa-6.03□□□□□ -3.37
LINC00648-203ENST00000556923 ERICH3Q5RHP9 1530 aa-6.03□□□□□ -3.37
LINC00648-203ENST00000556923 ADIRFQ15847 76 aa-6.04□□□□□ -3.38
LINC00648-203ENST00000556923 C18orf32Q8TCD1 76 aa-6.04□□□□□ -3.38
LINC00648-203ENST00000556923 CCDC18Q5T9S5 1454 aa-6.04□□□□□ -3.38
LINC00648-203ENST00000556923 ATP6V1G2-DDX39BF2Z307 99 aa-6.06□□□□□ -3.38
LINC00648-203ENST00000556923 Q9H521 79 aa-6.07□□□□□ -3.38
LINC00648-203ENST00000556923 CPS1P31327 1500 aa-6.09□□□□□ -3.39
LINC00648-203ENST00000556923 A0A087WWC5 75 aa-6.11□□□□□ -3.39
LINC00648-203ENST00000556923 M0R143 59 aa-6.11□□□□□ -3.39
LINC00648-203ENST00000556923 PKIAP61925 76 aa-6.11□□□□□ -3.39
LINC00648-203ENST00000556923 ABCC8Q09428 1581 aa-6.11□□□□□ -3.39
LINC00648-203ENST00000556923 RPL39P62891 51 aaKnown RBP-6.14□□□□□ -3.39
LINC00648-203ENST00000556923 UGGT2Q9NYU1 1516 aa-6.21□□□□□ -3.4
LINC00648-203ENST00000556923 SAMD9LQ8IVG5 1584 aa-6.22□□□□□ -3.4
LINC00648-203ENST00000556923 RPL39LQ96EH5 51 aaKnown RBP-6.26□□□□□ -3.41
LINC00648-203ENST00000556923 S100A13Q99584 98 aa-6.26□□□□□ -3.41
LINC00648-203ENST00000556923 H3BSH0 61 aa-6.28□□□□□ -3.41
LINC00648-203ENST00000556923 V9GYS6 101 aa-6.3□□□□□ -3.42
LINC00648-203ENST00000556923 ABCA10Q8WWZ4 1543 aa-6.3□□□□□ -3.42
LINC00648-203ENST00000556923 MROH2BQ7Z745 1585 aa-6.33□□□□□ -3.42
LINC00648-203ENST00000556923 FANCD2Q9BXW9 1451 aa-6.39□□□□□ -3.43
LINC00648-203ENST00000556923 SMCO4Q9NRQ5 59 aa-6.39□□□□□ -3.43
LINC00648-203ENST00000556923 PRCDQ00LT1 54 aa-6.46□□□□□ -3.44
LINC00648-203ENST00000556923 TMEM167AQ8TBQ9 72 aa-6.5□□□□□ -3.45
LINC00648-203ENST00000556923 K7EIM0 57 aa-6.54□□□□□ -3.46
LINC00648-203ENST00000556923 CMC2Q9NRP2 79 aa-6.54□□□□□ -3.46
LINC00648-203ENST00000556923 EFCAB5A4FU69 1503 aa-6.55□□□□□ -3.46
LINC00648-203ENST00000556923 Q9Y3F1 56 aa-6.6□□□□□ -3.47
LINC00648-203ENST00000556923 IQGAP2Q13576 1575 aa-6.72□□□□□ -3.49
LINC00648-203ENST00000556923 ARHGAP5-AS1Q96IT6 56 aa-6.72□□□□□ -3.49
LINC00648-203ENST00000556923 COX14Q96I36 57 aa-6.76□□□□□ -3.49
LINC00648-203ENST00000556923 SMIM5Q71RC9 77 aa-6.84□□□□□ -3.5
LINC00648-203ENST00000556923 SNRPGP15A8MWD9 76 aa-6.85□□□□□ -3.51
LINC00648-203ENST00000556923 DEFB108BQ8NET1 73 aa-6.92□□□□□ -3.52
LINC00648-203ENST00000556923 STATHP02808 62 aa-7□□□□□ -3.53
LINC00648-203ENST00000556923 RPL39P5Q59GN2 51 aa-7.09□□□□□ -3.54
LINC00648-203ENST00000556923 DEFB108AA8MXU0 73 aa-7.12□□□□□ -3.55
LINC00648-203ENST00000556923 GNG2P59768 71 aa-7.12□□□□□ -3.55
LINC00648-203ENST00000556923 SNRPGP62308 76 aaKnown RBP-7.24□□□□□ -3.57
LINC00648-203ENST00000556923 GCC2Q8IWJ2 1684 aa-7.3□□□□□ -3.58
LINC00648-203ENST00000556923 TOMM5Q8N4H5 51 aa-7.55□□□□□ -3.62
LINC00648-203ENST00000556923 SMIM31A0A1B0GVY4 71 aa-7.64□□□□□ -3.63
Retrieved 78 of 20,778 RNA–protein pairs in 46.2 ms