RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 UQCR11O14957 56 aa3.77□□□□□ -1.81
HNRNPC-227ENST00000556897 MIR22HGQ0VDD5 57 aa3.76□□□□□ -1.81
HNRNPC-227ENST00000556897 ADM2Q7Z4H4 148 aa3.75□□□□□ -1.81
HNRNPC-227ENST00000556897 DSTQ03001 7570 aaKnown RBP3.74□□□□□ -1.81
HNRNPC-227ENST00000556897 A0A1B0GU69 56 aa3.74□□□□□ -1.81
HNRNPC-227ENST00000556897 KRTAP12-2P59991 146 aa3.73□□□□□ -1.81
HNRNPC-227ENST00000556897 DMAC1Q96GE9 116 aa3.72□□□□□ -1.81
HNRNPC-227ENST00000556897 H0YAA0 97 aa3.71□□□□□ -1.82
HNRNPC-227ENST00000556897 ROMO1P60602 79 aa3.71□□□□□ -1.82
HNRNPC-227ENST00000556897 PLAC4Q8WY50 150 aa3.71□□□□□ -1.82
HNRNPC-227ENST00000556897 KRTAP25-1Q3LHN0 102 aa3.68□□□□□ -1.82
HNRNPC-227ENST00000556897 KRTAP10-7P60409 375 aaPredicted RBP3.62□□□□□ -1.83
HNRNPC-227ENST00000556897 R4GN34 69 aa3.61□□□□□ -1.83
HNRNPC-227ENST00000556897 KRTAP10-12P60413 245 aa3.59□□□□□ -1.83
HNRNPC-227ENST00000556897 M0QZ58 72 aa3.57□□□□□ -1.84
HNRNPC-227ENST00000556897 P0C880 135 aa3.57□□□□□ -1.84
HNRNPC-227ENST00000556897 K7ERS5 55 aa3.53□□□□□ -1.84
HNRNPC-227ENST00000556897 MT3P25713 68 aa3.5□□□□□ -1.85
HNRNPC-227ENST00000556897 A0A1B0GU33 70 aa3.46□□□□□ -1.86
HNRNPC-227ENST00000556897 HMCN1Q96RW7 5635 aa3.43□□□□□ -1.86
HNRNPC-227ENST00000556897 SPINT4Q6UDR6 99 aa3.42□□□□□ -1.86
HNRNPC-227ENST00000556897 KRTAP19-7Q3SYF9 63 aa3.4□□□□□ -1.87
HNRNPC-227ENST00000556897 KRTAP19-3Q7Z4W3 81 aa3.4□□□□□ -1.87
HNRNPC-227ENST00000556897 CAMK2N1Q7Z7J9 78 aa3.4□□□□□ -1.87
HNRNPC-227ENST00000556897 AHNAK2Q8IVF2 5795 aa3.4□□□□□ -1.87
HNRNPC-227ENST00000556897 MT1EP04732 61 aa3.38□□□□□ -1.87
HNRNPC-227ENST00000556897 MT4P47944 62 aa3.38□□□□□ -1.87
HNRNPC-227ENST00000556897 KRTAP5-10Q6L8G5 202 aa3.33□□□□□ -1.88
HNRNPC-227ENST00000556897 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
HNRNPC-227ENST00000556897 MT1GP13640 62 aa3.29□□□□□ -1.88
HNRNPC-227ENST00000556897 PP632Q6XCG6 107 aa3.26□□□□□ -1.89
HNRNPC-227ENST00000556897 KRTAP19-5Q3LI72 72 aa3.24□□□□□ -1.89
HNRNPC-227ENST00000556897 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
HNRNPC-227ENST00000556897 KRTAP13-4Q3LI77 160 aa3.23□□□□□ -1.89
HNRNPC-227ENST00000556897 MT1MQ8N339 61 aa3.23□□□□□ -1.89
HNRNPC-227ENST00000556897 KRTAP5-7Q6L8G8 165 aa3.22□□□□□ -1.89
HNRNPC-227ENST00000556897 A0A0D9SG42 100 aa3.21□□□□□ -1.9
HNRNPC-227ENST00000556897 KRTAP4-3Q9BYR4 195 aa3.2□□□□□ -1.9
HNRNPC-227ENST00000556897 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
HNRNPC-227ENST00000556897 MT1LQ93083 61 aa3.18□□□□□ -1.9
HNRNPC-227ENST00000556897 C10orf95Q9H7T3 257 aa3.16□□□□□ -1.9
HNRNPC-227ENST00000556897 SPRR5A0A1B0GTR4 108 aa3.11□□□□□ -1.91
HNRNPC-227ENST00000556897 KRTAP12-1P59990 96 aa3.09□□□□□ -1.91
HNRNPC-227ENST00000556897 KRTAP20-2Q3LI61 65 aa3.08□□□□□ -1.92
HNRNPC-227ENST00000556897 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
HNRNPC-227ENST00000556897 LCE3AQ5TA76 89 aa3.03□□□□□ -1.92
HNRNPC-227ENST00000556897 SYNE1Q8NF91 8797 aaKnown RBP3□□□□□ -1.93
HNRNPC-227ENST00000556897 KRTAP5-5Q701N2 237 aaPredicted RBP2.99□□□□□ -1.93
HNRNPC-227ENST00000556897 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
HNRNPC-227ENST00000556897 LCE3CQ5T5A8 94 aa2.98□□□□□ -1.93
HNRNPC-227ENST00000556897 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
HNRNPC-227ENST00000556897 TNP1P09430 55 aa2.94□□□□□ -1.94
HNRNPC-227ENST00000556897 INE1O15225 51 aa2.93□□□□□ -1.94
HNRNPC-227ENST00000556897 KRTAP12-3P60328 96 aa2.91□□□□□ -1.94
HNRNPC-227ENST00000556897 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
HNRNPC-227ENST00000556897 AHNAKQ09666 5890 aaKnown RBP2.9□□□□□ -1.95
HNRNPC-227ENST00000556897 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
HNRNPC-227ENST00000556897 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
HNRNPC-227ENST00000556897 OBSCNQ5VST9 7968 aa2.8□□□□□ -1.96
HNRNPC-227ENST00000556897 KRTAP5-8O75690 187 aa2.79□□□□□ -1.96
HNRNPC-227ENST00000556897 KRTAP5-2Q701N4 177 aa2.79□□□□□ -1.96
HNRNPC-227ENST00000556897 LCE3EQ5T5B0 92 aa2.72□□□□□ -1.97
HNRNPC-227ENST00000556897 KRTAP6-1Q3LI64 71 aa2.71□□□□□ -1.98
HNRNPC-227ENST00000556897 MT1AP04731 61 aa2.7□□□□□ -1.98
HNRNPC-227ENST00000556897 KRTAP6-2Q3LI66 62 aa2.65□□□□□ -1.99
HNRNPC-227ENST00000556897 KRTAP9-6A8MVA2 160 aa2.63□□□□□ -1.99
HNRNPC-227ENST00000556897 KRTAP5-1Q6L8H4 278 aa2.63□□□□□ -1.99
HNRNPC-227ENST00000556897 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
HNRNPC-227ENST00000556897 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
HNRNPC-227ENST00000556897 LCE1BQ5T7P3 118 aa2.25□□□□□ -2.05
HNRNPC-227ENST00000556897 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
HNRNPC-227ENST00000556897 PHGR1C9JFL3 82 aa1.96□□□□□ -2.1
HNRNPC-227ENST00000556897 PRM1P04553 51 aa1.8□□□□□ -2.12
HNRNPC-227ENST00000556897 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
HNRNPC-227ENST00000556897 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
HNRNPC-227ENST00000556897 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
HNRNPC-227ENST00000556897 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 101.8 ms