RNA–Protein interactions for RNA: ENST00000555627.1

SIX1-204, Transcript of SIX homeobox 1, humanhuman

TSL 5

Gene SIX1, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-204ENST00000555627 MT1XP80297 61 aa4.02□□□□□ -1.77
SIX1-204ENST00000555627 KRTAP10-5P60370 271 aa4□□□□□ -1.77
SIX1-204ENST00000555627 PLAC4Q8WY50 150 aa4□□□□□ -1.77
SIX1-204ENST00000555627 C10orf95Q9H7T3 257 aa3.99□□□□□ -1.77
SIX1-204ENST00000555627 PMAIP1Q13794 54 aa3.97□□□□□ -1.77
SIX1-204ENST00000555627 CAMK2N1Q7Z7J9 78 aa3.97□□□□□ -1.77
SIX1-204ENST00000555627 ROMO1P60602 79 aa3.93□□□□□ -1.78
SIX1-204ENST00000555627 AHNAK2Q8IVF2 5795 aa3.9□□□□□ -1.78
SIX1-204ENST00000555627 SPRR2EP22531 72 aa3.88□□□□□ -1.79
SIX1-204ENST00000555627 SPRR2BP35325 72 aa3.88□□□□□ -1.79
SIX1-204ENST00000555627 SPRR2AP35326 72 aa3.88□□□□□ -1.79
SIX1-204ENST00000555627 KTN1-AS1Q86SY8 53 aa3.86□□□□□ -1.79
SIX1-204ENST00000555627 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
SIX1-204ENST00000555627 KRTAP10-7P60409 375 aaPredicted RBP3.84□□□□□ -1.79
SIX1-204ENST00000555627 PRO2289Q9P1D8 64 aa3.84□□□□□ -1.79
SIX1-204ENST00000555627 DSTQ03001 7570 aaKnown RBP3.84□□□□□ -1.8
SIX1-204ENST00000555627 PRAC1Q96KF2 57 aa3.83□□□□□ -1.8
SIX1-204ENST00000555627 KRTAP25-1Q3LHN0 102 aa3.82□□□□□ -1.8
SIX1-204ENST00000555627 TNP1P09430 55 aa3.79□□□□□ -1.8
SIX1-204ENST00000555627 KRTAP10-12P60413 245 aa3.79□□□□□ -1.8
SIX1-204ENST00000555627 HMCN1Q96RW7 5635 aa3.79□□□□□ -1.8
SIX1-204ENST00000555627 SPRR2DP22532 72 aa3.75□□□□□ -1.81
SIX1-204ENST00000555627 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
SIX1-204ENST00000555627 SPRR2FQ96RM1 72 aa3.73□□□□□ -1.81
SIX1-204ENST00000555627 LCE1AQ5T7P2 110 aa3.71□□□□□ -1.82
SIX1-204ENST00000555627 KRTAP23-1A1A580 65 aa3.69□□□□□ -1.82
SIX1-204ENST00000555627 KRTAP5-10Q6L8G5 202 aa3.68□□□□□ -1.82
SIX1-204ENST00000555627 SPRR5A0A1B0GTR4 108 aa3.66□□□□□ -1.82
SIX1-204ENST00000555627 KRTAP5-7Q6L8G8 165 aa3.65□□□□□ -1.83
SIX1-204ENST00000555627 KRTAP8-1Q8IUC2 63 aa3.65□□□□□ -1.83
SIX1-204ENST00000555627 PP632Q6XCG6 107 aa3.64□□□□□ -1.83
SIX1-204ENST00000555627 KRTAP19-7Q3SYF9 63 aa3.6□□□□□ -1.83
SIX1-204ENST00000555627 KRTAP19-5Q3LI72 72 aa3.58□□□□□ -1.84
SIX1-204ENST00000555627 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
SIX1-204ENST00000555627 KRTAP12-3P60328 96 aa3.54□□□□□ -1.84
SIX1-204ENST00000555627 KRTAP5-4Q6L8H1 288 aa3.54□□□□□ -1.84
SIX1-204ENST00000555627 H3BS24 57 aa3.53□□□□□ -1.84
SIX1-204ENST00000555627 MT1EP04732 61 aa3.53□□□□□ -1.84
SIX1-204ENST00000555627 AHNAKQ09666 5890 aaKnown RBP3.52□□□□□ -1.85
SIX1-204ENST00000555627 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
SIX1-204ENST00000555627 KRTAP15-1Q3LI76 137 aa3.45□□□□□ -1.86
SIX1-204ENST00000555627 MT1LQ93083 61 aa3.44□□□□□ -1.86
SIX1-204ENST00000555627 MT4P47944 62 aa3.37□□□□□ -1.87
SIX1-204ENST00000555627 KRTAP19-3Q7Z4W3 81 aa3.37□□□□□ -1.87
SIX1-204ENST00000555627 MUC5BQ9HC84 5762 aaPredicted RBP3.37□□□□□ -1.87
SIX1-204ENST00000555627 MUC5ACP98088 5654 aa3.34□□□□□ -1.87
SIX1-204ENST00000555627 MT1MQ8N339 61 aa3.32□□□□□ -1.88
SIX1-204ENST00000555627 LCE3CQ5T5A8 94 aa3.3□□□□□ -1.88
SIX1-204ENST00000555627 MT1GP13640 62 aa3.29□□□□□ -1.88
SIX1-204ENST00000555627 A0A0A0MQY5 61 aa3.26□□□□□ -1.89
SIX1-204ENST00000555627 KRTAP4-3Q9BYR4 195 aa3.26□□□□□ -1.89
SIX1-204ENST00000555627 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
SIX1-204ENST00000555627 KRTAP9-6A8MVA2 160 aa3.22□□□□□ -1.89
SIX1-204ENST00000555627 KRTAP5-2Q701N4 177 aa3.09□□□□□ -1.91
SIX1-204ENST00000555627 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
SIX1-204ENST00000555627 LUZP6Q538Z0 58 aa2.98□□□□□ -1.93
SIX1-204ENST00000555627 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
SIX1-204ENST00000555627 NDUFAF8A1L188 74 aa2.96□□□□□ -1.94
SIX1-204ENST00000555627 KRTAP20-2Q3LI61 65 aa2.94□□□□□ -1.94
SIX1-204ENST00000555627 MT1AP04731 61 aa2.92□□□□□ -1.94
SIX1-204ENST00000555627 KRTAP5-8O75690 187 aa2.9□□□□□ -1.95
SIX1-204ENST00000555627 KRTAP6-1Q3LI64 71 aa2.9□□□□□ -1.95
SIX1-204ENST00000555627 SYNE1Q8NF91 8797 aaKnown RBP2.89□□□□□ -1.95
SIX1-204ENST00000555627 KRTAP12-4P60329 112 aa2.69□□□□□ -1.98
SIX1-204ENST00000555627 KRTAP6-2Q3LI66 62 aa2.65□□□□□ -1.99
SIX1-204ENST00000555627 MT3P25713 68 aa2.58□□□□□ -2
SIX1-204ENST00000555627 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
SIX1-204ENST00000555627 INE1O15225 51 aa2.41□□□□□ -2.02
SIX1-204ENST00000555627 LCE3EQ5T5B0 92 aa2.37□□□□□ -2.03
SIX1-204ENST00000555627 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
SIX1-204ENST00000555627 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
SIX1-204ENST00000555627 LCE1BQ5T7P3 118 aa2.13□□□□□ -2.07
SIX1-204ENST00000555627 PRM1P04553 51 aa2.08□□□□□ -2.08
SIX1-204ENST00000555627 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
SIX1-204ENST00000555627 LCE1FQ5T754 118 aa1.88□□□□□ -2.11
SIX1-204ENST00000555627 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
SIX1-204ENST00000555627 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
SIX1-204ENST00000555627 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 59.9 ms