RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 NRXN3Q9Y4C0 1643 aa-1.4□□□□□ -2.63
LINC00648-201ENST00000553747 VCANP13611 3396 aa-1.42□□□□□ -2.64
LINC00648-201ENST00000553747 LEAP2Q969E1 77 aa-1.42□□□□□ -2.64
LINC00648-201ENST00000553747 ADCY10Q96PN6 1610 aa-1.43□□□□□ -2.64
LINC00648-201ENST00000553747 POLR2KP53803 58 aaKnown RBP-1.43□□□□□ -2.64
LINC00648-201ENST00000553747 IQGAP1P46940 1657 aa-1.43□□□□□ -2.64
LINC00648-201ENST00000553747 DNAH14Q0VDD8 3507 aa-1.43□□□□□ -2.64
LINC00648-201ENST00000553747 DEFB4AO15263 64 aa-1.44□□□□□ -2.64
LINC00648-201ENST00000553747 FRYLO94915 3013 aa-1.44□□□□□ -2.64
LINC00648-201ENST00000553747 SMIM5Q71RC9 77 aa-1.45□□□□□ -2.64
LINC00648-201ENST00000553747 SZT2Q5T011 3432 aa-1.45□□□□□ -2.64
LINC00648-201ENST00000553747 CEP250Q9BV73 2442 aa-1.46□□□□□ -2.64
LINC00648-201ENST00000553747 USP34Q70CQ2 3546 aa-1.46□□□□□ -2.64
LINC00648-201ENST00000553747 PLNP26678 52 aa-1.46□□□□□ -2.64
LINC00648-201ENST00000553747 UNC80Q8N2C7 3258 aa-1.48□□□□□ -2.65
LINC00648-201ENST00000553747 DEFB136Q30KP8 78 aa-1.48□□□□□ -2.65
LINC00648-201ENST00000553747 PCNTO95613 3336 aa-1.48□□□□□ -2.65
LINC00648-201ENST00000553747 ABCC8Q09428 1581 aa-1.48□□□□□ -2.65
LINC00648-201ENST00000553747 CLTCL1P53675 1640 aa-1.48□□□□□ -2.65
LINC00648-201ENST00000553747 DDX60Q8IY21 1712 aaKnown RBP-1.49□□□□□ -2.65
LINC00648-201ENST00000553747 FANCD2Q9BXW9 1451 aa-1.5□□□□□ -2.65
LINC00648-201ENST00000553747 TRPM2O94759 1503 aa-1.5□□□□□ -2.65
LINC00648-201ENST00000553747 TFF3Q07654 80 aa-1.51□□□□□ -2.65
LINC00648-201ENST00000553747 CFAP47Q6ZTR5 3102 aa-1.51□□□□□ -2.65
LINC00648-201ENST00000553747 NFAT5O94916 1531 aa-1.53□□□□□ -2.65
LINC00648-201ENST00000553747 DNAH12Q6ZR08 3092 aa-1.54□□□□□ -2.66
LINC00648-201ENST00000553747 SMIM2Q9BVW6 85 aa-1.55□□□□□ -2.66
LINC00648-201ENST00000553747 CENPFP49454 3210 aa-1.57□□□□□ -2.66
LINC00648-201ENST00000553747 SMIM31A0A1B0GVY4 71 aa-1.58□□□□□ -2.66
LINC00648-201ENST00000553747 CMC2Q9NRP2 79 aa-1.58□□□□□ -2.66
LINC00648-201ENST00000553747 ASPMQ8IZT6 3477 aa-1.6□□□□□ -2.66
LINC00648-201ENST00000553747 ERICH3Q5RHP9 1530 aa-1.62□□□□□ -2.67
LINC00648-201ENST00000553747 BRCA2P51587 3418 aa-1.64□□□□□ -2.67
LINC00648-201ENST00000553747 NDUFA1O15239 70 aa-1.67□□□□□ -2.68
LINC00648-201ENST00000553747 CDH23Q9H251 3354 aa-1.7□□□□□ -2.68
LINC00648-201ENST00000553747 VPS13AQ96RL7 3174 aa-1.71□□□□□ -2.68
LINC00648-201ENST00000553747 KRTAP19-2Q3LHN2 52 aa-1.71□□□□□ -2.68
LINC00648-201ENST00000553747 TTTY10Q9BZA0 68 aa-1.76□□□□□ -2.69
LINC00648-201ENST00000553747 UTRNP46939 3433 aa-1.78□□□□□ -2.69
LINC00648-201ENST00000553747 XIRP2A4UGR9 3374 aa-1.81□□□□□ -2.7
LINC00648-201ENST00000553747 IQGAP2Q13576 1575 aa-1.85□□□□□ -2.71
LINC00648-201ENST00000553747 SAMD9LQ8IVG5 1584 aa-1.85□□□□□ -2.71
LINC00648-201ENST00000553747 TOMM7Q9P0U1 55 aa-1.86□□□□□ -2.71
LINC00648-201ENST00000553747 SNRPGP15A8MWD9 76 aa-1.87□□□□□ -2.71
LINC00648-201ENST00000553747 LINC01590Q5TEZ4 76 aa-1.87□□□□□ -2.71
LINC00648-201ENST00000553747 DUOX1Q9NRD9 1551 aa-1.88□□□□□ -2.71
LINC00648-201ENST00000553747 GOLGB1Q14789 3259 aaKnown RBP-1.88□□□□□ -2.71
LINC00648-201ENST00000553747 ATP7AQ04656 1500 aa-1.91□□□□□ -2.72
LINC00648-201ENST00000553747 DEFB104AQ8WTQ1 72 aa-1.92□□□□□ -2.72
LINC00648-201ENST00000553747 RHPN1-AS1Q9BWJ2 59 aa-1.92□□□□□ -2.72
LINC00648-201ENST00000553747 CD52P31358 61 aa-1.94□□□□□ -2.72
LINC00648-201ENST00000553747 MROH2BQ7Z745 1585 aa-1.98□□□□□ -2.73
LINC00648-201ENST00000553747 TOP2AP11388 1531 aaKnown RBP-2□□□□□ -2.73
LINC00648-201ENST00000553747 RPL39P62891 51 aaKnown RBP-2□□□□□ -2.73
LINC00648-201ENST00000553747 DEFB133Q30KQ1 61 aa-2□□□□□ -2.73
LINC00648-201ENST00000553747 TOMM5Q8N4H5 51 aa-2.08□□□□□ -2.74
LINC00648-201ENST00000553747 A0A096LNI7 61 aa-2.09□□□□□ -2.74
LINC00648-201ENST00000553747 HTN1P15515 57 aa-2.09□□□□□ -2.74
LINC00648-201ENST00000553747 DEFB124Q8NES8 71 aa-2.09□□□□□ -2.74
LINC00648-201ENST00000553747 RPL39LQ96EH5 51 aaKnown RBP-2.1□□□□□ -2.75
LINC00648-201ENST00000553747 LINC01556Q5JQF7 62 aa-2.27□□□□□ -2.77
LINC00648-201ENST00000553747 H3BUX3 64 aa-2.32□□□□□ -2.78
LINC00648-201ENST00000553747 GCC2Q8IWJ2 1684 aa-2.37□□□□□ -2.79
LINC00648-201ENST00000553747 K7EIM0 57 aa-2.44□□□□□ -2.8
LINC00648-201ENST00000553747 A0A096LPF7 62 aa-2.52□□□□□ -2.81
LINC00648-201ENST00000553747 ARHGAP5-AS1Q96IT6 56 aa-2.55□□□□□ -2.82
LINC00648-201ENST00000553747 APELAP0DMC3 54 aa-2.57□□□□□ -2.82
LINC00648-201ENST00000553747 SNRPGP62308 76 aaKnown RBP-2.57□□□□□ -2.82
LINC00648-201ENST00000553747 PRCDQ00LT1 54 aa-2.57□□□□□ -2.82
LINC00648-201ENST00000553747 Q9Y3F1 56 aa-2.57□□□□□ -2.82
LINC00648-201ENST00000553747 HTN3P15516 51 aa-2.58□□□□□ -2.82
LINC00648-201ENST00000553747 H3BSH0 61 aa-2.66□□□□□ -2.84
LINC00648-201ENST00000553747 COX14Q96I36 57 aa-2.7□□□□□ -2.84
LINC00648-201ENST00000553747 TMEM167AQ8TBQ9 72 aa-2.72□□□□□ -2.84
LINC00648-201ENST00000553747 DEFB108BQ8NET1 73 aa-2.86□□□□□ -2.87
LINC00648-201ENST00000553747 STATHP02808 62 aa-2.88□□□□□ -2.87
LINC00648-201ENST00000553747 RPL39P5Q59GN2 51 aa-2.88□□□□□ -2.87
LINC00648-201ENST00000553747 DEFB108AA8MXU0 73 aa-2.98□□□□□ -2.89
Retrieved 78 of 20,778 RNA–protein pairs in 80.6 ms