RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 CASC2Q6XLA1 102 aa1.36□□□□□ -2.19
ATXN3-217ENST00000553287 NDUFC1O43677 76 aa1.35□□□□□ -2.19
ATXN3-217ENST00000553287 NDUFB1O75438 58 aa1.35□□□□□ -2.19
ATXN3-217ENST00000553287 MT-ATP8P03928 68 aa1.35□□□□□ -2.19
ATXN3-217ENST00000553287 BAALC-AS2P0C853 105 aa1.35□□□□□ -2.19
ATXN3-217ENST00000553287 TMEM254Q8TBM7 123 aa1.35□□□□□ -2.19
ATXN3-217ENST00000553287 PLAC4Q8WY50 150 aa1.35□□□□□ -2.19
ATXN3-217ENST00000553287 MRPL34Q9BQ48 92 aaKnown RBP1.35□□□□□ -2.19
ATXN3-217ENST00000553287 H0YGX0 51 aa1.33□□□□□ -2.2
ATXN3-217ENST00000553287 Q6ZQT0 140 aa1.33□□□□□ -2.2
ATXN3-217ENST00000553287 CRIPTQ9P021 101 aa1.33□□□□□ -2.2
ATXN3-217ENST00000553287 SPCS1Q9Y6A9 102 aa1.33□□□□□ -2.2
ATXN3-217ENST00000553287 PDE6GP18545 87 aa1.32□□□□□ -2.2
ATXN3-217ENST00000553287 ROMO1P60602 79 aa1.32□□□□□ -2.2
ATXN3-217ENST00000553287 KRTAP19-3Q7Z4W3 81 aa1.32□□□□□ -2.2
ATXN3-217ENST00000553287 CYSTM1Q9H1C7 97 aa1.32□□□□□ -2.2
ATXN3-217ENST00000553287 ORMDL1Q9P0S3 153 aa1.32□□□□□ -2.2
ATXN3-217ENST00000553287 HCG22E2RYF7 251 aa1.31□□□□□ -2.2
ATXN3-217ENST00000553287 H0YAA0 97 aa1.31□□□□□ -2.2
ATXN3-217ENST00000553287 DNAL4O96015 105 aa1.31□□□□□ -2.2
ATXN3-217ENST00000553287 Q1T7F1 81 aa1.31□□□□□ -2.2
ATXN3-217ENST00000553287 KRTAP19-7Q3SYF9 63 aa1.31□□□□□ -2.2
ATXN3-217ENST00000553287 SERP2Q8N6R1 65 aa1.31□□□□□ -2.2
ATXN3-217ENST00000553287 CYP4F30PQ9H0H9 118 aa1.31□□□□□ -2.2
ATXN3-217ENST00000553287 A0A1W2PPM0 123 aa1.3□□□□□ -2.2
ATXN3-217ENST00000553287 MT1EP04732 61 aa1.3□□□□□ -2.2
ATXN3-217ENST00000553287 ACYP1P07311 99 aa1.3□□□□□ -2.2
ATXN3-217ENST00000553287 COX6CP09669 75 aa1.28□□□□□ -2.2
ATXN3-217ENST00000553287 MIR22HGQ0VDD5 57 aa1.28□□□□□ -2.2
ATXN3-217ENST00000553287 ETDBQ3ZM63 59 aa1.28□□□□□ -2.2
ATXN3-217ENST00000553287 SPATA45Q537H7 98 aa1.28□□□□□ -2.2
ATXN3-217ENST00000553287 CDC42SE1Q9NRR8 79 aa1.28□□□□□ -2.2
ATXN3-217ENST00000553287 PRO1854Q9UHT4 67 aa1.28□□□□□ -2.2
ATXN3-217ENST00000553287 M0QZ58 72 aa1.27□□□□□ -2.21
ATXN3-217ENST00000553287 NREPQ16612 68 aa1.27□□□□□ -2.21
ATXN3-217ENST00000553287 KRTAP20-2Q3LI61 65 aa1.27□□□□□ -2.21
ATXN3-217ENST00000553287 LINC00643Q86TS7 51 aa1.27□□□□□ -2.21
ATXN3-217ENST00000553287 MT1MQ8N339 61 aa1.27□□□□□ -2.21
ATXN3-217ENST00000553287 SPTSSBQ8NFR3 76 aa1.27□□□□□ -2.21
ATXN3-217ENST00000553287 COX8AP10176 69 aa1.26□□□□□ -2.21
ATXN3-217ENST00000553287 DMAC1Q96GE9 116 aa1.26□□□□□ -2.21
ATXN3-217ENST00000553287 H7BZZ5 65 aa1.24□□□□□ -2.21
ATXN3-217ENST00000553287 MT1GP13640 62 aa1.24□□□□□ -2.21
ATXN3-217ENST00000553287 KRTAP19-5Q3LI72 72 aa1.24□□□□□ -2.21
ATXN3-217ENST00000553287 CHKB-CPT1BH3BT56 60 aa1.23□□□□□ -2.21
ATXN3-217ENST00000553287 HIGD1BQ9P298 99 aa1.23□□□□□ -2.21
ATXN3-217ENST00000553287 LOC110117498A0A087WWA1 95 aa1.22□□□□□ -2.21
ATXN3-217ENST00000553287 TRAV22A0A0B4J277 110 aa1.22□□□□□ -2.21
ATXN3-217ENST00000553287 ATP5EP2Q5VTU8 51 aa1.22□□□□□ -2.21
ATXN3-217ENST00000553287 SYNE1Q8NF91 8797 aaKnown RBP1.22□□□□□ -2.21
ATXN3-217ENST00000553287 MT1LQ93083 61 aa1.21□□□□□ -2.22
ATXN3-217ENST00000553287 JMJD7-PLA2G4BH0Y9G9 81 aa1.2□□□□□ -2.22
ATXN3-217ENST00000553287 C20orf197Q8N268 126 aa1.2□□□□□ -2.22
ATXN3-217ENST00000553287 LOC101927531A0A1B0GV80 90 aa1.19□□□□□ -2.22
ATXN3-217ENST00000553287 A0A0D9SG42 100 aa1.17□□□□□ -2.22
ATXN3-217ENST00000553287 ATXN8Q156A1 80 aa1.17□□□□□ -2.22
ATXN3-217ENST00000553287 UQCR11O14957 56 aa1.16□□□□□ -2.22
ATXN3-217ENST00000553287 PRR15LQ9BU68 103 aa1.15□□□□□ -2.23
ATXN3-217ENST00000553287 SNURFQ9Y675 71 aa1.15□□□□□ -2.23
ATXN3-217ENST00000553287 LINC01558Q9Y6Z2 57 aa1.14□□□□□ -2.23
ATXN3-217ENST00000553287 INE1O15225 51 aa1.13□□□□□ -2.23
ATXN3-217ENST00000553287 COA5Q86WW8 74 aa1.13□□□□□ -2.23
ATXN3-217ENST00000553287 TP53AIP1Q9HCN2 124 aa1.13□□□□□ -2.23
ATXN3-217ENST00000553287 C10orf95Q9H7T3 257 aa1.12□□□□□ -2.23
ATXN3-217ENST00000553287 H0Y9P7 68 aa1.11□□□□□ -2.23
ATXN3-217ENST00000553287 ACYP2P14621 99 aa1.1□□□□□ -2.23
ATXN3-217ENST00000553287 LINC00208Q96KT6 92 aa1.1□□□□□ -2.23
ATXN3-217ENST00000553287 UBL5Q9BZL1 73 aa1.09□□□□□ -2.23
ATXN3-217ENST00000553287 SPATA8Q6RVD6 105 aa1.07□□□□□ -2.24
ATXN3-217ENST00000553287 KRTAP6-1Q3LI64 71 aa1.06□□□□□ -2.24
ATXN3-217ENST00000553287 KRTAP6-2Q3LI66 62 aa1.06□□□□□ -2.24
ATXN3-217ENST00000553287 A0A1B0GU69 56 aa1.05□□□□□ -2.24
ATXN3-217ENST00000553287 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
ATXN3-217ENST00000553287 MT1AP04731 61 aa1□□□□□ -2.25
ATXN3-217ENST00000553287 TNP1P09430 55 aa0.96□□□□□ -2.26
ATXN3-217ENST00000553287 PHGR1C9JFL3 82 aa0.95□□□□□ -2.26
ATXN3-217ENST00000553287 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
ATXN3-217ENST00000553287 PRM1P04553 51 aa0.48□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 124.6 ms