RNA–Protein interactions for RNA: ENST00000550863.1

CPNE8-207, Transcript of copine 8, humanhuman

TSL 4

Gene CPNE8, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-207ENST00000550863 KRTAP12-2P59991 146 aa4.67□□□□□ -1.66
CPNE8-207ENST00000550863 KRTAP10-7P60409 375 aaPredicted RBP4.66□□□□□ -1.66
CPNE8-207ENST00000550863 SPRR2DP22532 72 aa4.61□□□□□ -1.67
CPNE8-207ENST00000550863 A8MU10 97 aa4.59□□□□□ -1.67
CPNE8-207ENST00000550863 KRTAP10-12P60413 245 aa4.56□□□□□ -1.68
CPNE8-207ENST00000550863 K7ERS5 55 aa4.55□□□□□ -1.68
CPNE8-207ENST00000550863 KRTAP2-2Q9BYT5 123 aa4.55□□□□□ -1.68
CPNE8-207ENST00000550863 KRTAP2-1Q9BYU5 128 aa4.55□□□□□ -1.68
CPNE8-207ENST00000550863 PMAIP1Q13794 54 aa4.54□□□□□ -1.68
CPNE8-207ENST00000550863 KRTAP13-4Q3LI77 160 aa4.51□□□□□ -1.69
CPNE8-207ENST00000550863 KRTAP23-1A1A580 65 aa4.46□□□□□ -1.7
CPNE8-207ENST00000550863 A0A0D9SG42 100 aa4.44□□□□□ -1.7
CPNE8-207ENST00000550863 DSTQ03001 7570 aaKnown RBP4.42□□□□□ -1.7
CPNE8-207ENST00000550863 KTN1-AS1Q86SY8 53 aa4.42□□□□□ -1.7
CPNE8-207ENST00000550863 KRTAP12-1P59990 96 aa4.38□□□□□ -1.71
CPNE8-207ENST00000550863 KRTAP19-7Q3SYF9 63 aa4.34□□□□□ -1.71
CPNE8-207ENST00000550863 SPINT4Q6UDR6 99 aa4.34□□□□□ -1.71
CPNE8-207ENST00000550863 GPR98Q8WXG9 6306 aa4.31□□□□□ -1.72
CPNE8-207ENST00000550863 ROMO1P60602 79 aa4.31□□□□□ -1.72
CPNE8-207ENST00000550863 CAMK2N1Q7Z7J9 78 aa4.31□□□□□ -1.72
CPNE8-207ENST00000550863 MT1EP04732 61 aa4.3□□□□□ -1.72
CPNE8-207ENST00000550863 KRTAP19-3Q7Z4W3 81 aa4.26□□□□□ -1.73
CPNE8-207ENST00000550863 KRTAP19-5Q3LI72 72 aa4.2□□□□□ -1.74
CPNE8-207ENST00000550863 PRAC1Q96KF2 57 aa4.18□□□□□ -1.74
CPNE8-207ENST00000550863 KRTAP15-1Q3LI76 137 aa4.16□□□□□ -1.74
CPNE8-207ENST00000550863 KRTAP25-1Q3LHN0 102 aa4.15□□□□□ -1.75
CPNE8-207ENST00000550863 HMCN1Q96RW7 5635 aa4.13□□□□□ -1.75
CPNE8-207ENST00000550863 MT1MQ8N339 61 aa4.11□□□□□ -1.75
CPNE8-207ENST00000550863 KRTAP4-3Q9BYR4 195 aa4.11□□□□□ -1.75
CPNE8-207ENST00000550863 C10orf95Q9H7T3 257 aa4.11□□□□□ -1.75
CPNE8-207ENST00000550863 MT1GP13640 62 aa4.09□□□□□ -1.75
CPNE8-207ENST00000550863 MT1LQ93083 61 aa4.09□□□□□ -1.75
CPNE8-207ENST00000550863 MT4P47944 62 aa4.08□□□□□ -1.76
CPNE8-207ENST00000550863 AHNAK2Q8IVF2 5795 aa4.07□□□□□ -1.76
CPNE8-207ENST00000550863 LCE3AQ5TA76 89 aa4.06□□□□□ -1.76
CPNE8-207ENST00000550863 TNP1P09430 55 aa4.05□□□□□ -1.76
CPNE8-207ENST00000550863 PP632Q6XCG6 107 aa4.04□□□□□ -1.76
CPNE8-207ENST00000550863 A0A0A0MQY5 61 aa4.01□□□□□ -1.77
CPNE8-207ENST00000550863 KRTAP5-4Q6L8H1 288 aa3.95□□□□□ -1.78
CPNE8-207ENST00000550863 KRTAP5-10Q6L8G5 202 aa3.88□□□□□ -1.79
CPNE8-207ENST00000550863 KRTAP12-3P60328 96 aa3.84□□□□□ -1.79
CPNE8-207ENST00000550863 KRTAP5-5Q701N2 237 aaPredicted RBP3.77□□□□□ -1.81
CPNE8-207ENST00000550863 KRTAP20-2Q3LI61 65 aa3.76□□□□□ -1.81
CPNE8-207ENST00000550863 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
CPNE8-207ENST00000550863 KRTAP5-7Q6L8G8 165 aa3.7□□□□□ -1.82
CPNE8-207ENST00000550863 SPRR5A0A1B0GTR4 108 aa3.65□□□□□ -1.83
CPNE8-207ENST00000550863 KRTAP12-4P60329 112 aa3.6□□□□□ -1.83
CPNE8-207ENST00000550863 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
CPNE8-207ENST00000550863 LUZP6Q538Z0 58 aa3.51□□□□□ -1.85
CPNE8-207ENST00000550863 LCE3CQ5T5A8 94 aa3.51□□□□□ -1.85
CPNE8-207ENST00000550863 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
CPNE8-207ENST00000550863 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
CPNE8-207ENST00000550863 MT1AP04731 61 aa3.45□□□□□ -1.86
CPNE8-207ENST00000550863 KRTAP5-2Q701N4 177 aa3.45□□□□□ -1.86
CPNE8-207ENST00000550863 KRTAP9-6A8MVA2 160 aa3.43□□□□□ -1.86
CPNE8-207ENST00000550863 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
CPNE8-207ENST00000550863 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
CPNE8-207ENST00000550863 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
CPNE8-207ENST00000550863 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
CPNE8-207ENST00000550863 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
CPNE8-207ENST00000550863 KRTAP6-2Q3LI66 62 aa3.34□□□□□ -1.87
CPNE8-207ENST00000550863 MUC5BQ9HC84 5762 aaPredicted RBP3.33□□□□□ -1.88
CPNE8-207ENST00000550863 MT3P25713 68 aa3.18□□□□□ -1.9
CPNE8-207ENST00000550863 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
CPNE8-207ENST00000550863 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
CPNE8-207ENST00000550863 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
CPNE8-207ENST00000550863 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
CPNE8-207ENST00000550863 INE1O15225 51 aa2.9□□□□□ -1.95
CPNE8-207ENST00000550863 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
CPNE8-207ENST00000550863 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
CPNE8-207ENST00000550863 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
CPNE8-207ENST00000550863 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
CPNE8-207ENST00000550863 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
CPNE8-207ENST00000550863 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
CPNE8-207ENST00000550863 PRM1P04553 51 aa2.22□□□□□ -2.05
CPNE8-207ENST00000550863 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
CPNE8-207ENST00000550863 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
CPNE8-207ENST00000550863 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 65.5 ms