RNA–Protein interactions for RNA: ENST00000549534.1

TROAP-210, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-210ENST00000549534 K7ERS5 55 aa4.42□□□□□ -1.7
TROAP-210ENST00000549534 MIR22HGQ0VDD5 57 aa4.4□□□□□ -1.71
TROAP-210ENST00000549534 LINC01554Q52M75 96 aa4.35□□□□□ -1.71
TROAP-210ENST00000549534 PLAC4Q8WY50 150 aa4.35□□□□□ -1.71
TROAP-210ENST00000549534 SPATA8Q6RVD6 105 aa4.34□□□□□ -1.71
TROAP-210ENST00000549534 MUC5ACP98088 5654 aa4.33□□□□□ -1.72
TROAP-210ENST00000549534 CDC42SE1Q9NRR8 79 aa4.32□□□□□ -1.72
TROAP-210ENST00000549534 MUC5BQ9HC84 5762 aaPredicted RBP4.31□□□□□ -1.72
TROAP-210ENST00000549534 MT1XP80297 61 aa4.3□□□□□ -1.72
TROAP-210ENST00000549534 A0A0D9SG42 100 aa4.29□□□□□ -1.72
TROAP-210ENST00000549534 SPINT4Q6UDR6 99 aa4.26□□□□□ -1.73
TROAP-210ENST00000549534 BRK1Q8WUW1 75 aa4.26□□□□□ -1.73
TROAP-210ENST00000549534 CAMK2N1Q7Z7J9 78 aa4.25□□□□□ -1.73
TROAP-210ENST00000549534 KRTAP13-4Q3LI77 160 aa4.24□□□□□ -1.73
TROAP-210ENST00000549534 LCE5AQ5TCM9 118 aa4.23□□□□□ -1.73
TROAP-210ENST00000549534 A8MU10 97 aa4.21□□□□□ -1.74
TROAP-210ENST00000549534 KRTAP5-4Q6L8H1 288 aa4.21□□□□□ -1.74
TROAP-210ENST00000549534 KRTAP12-1P59990 96 aa4.17□□□□□ -1.74
TROAP-210ENST00000549534 PRO0628Q9UI54 55 aa4.13□□□□□ -1.75
TROAP-210ENST00000549534 KRTAP10-12P60413 245 aa4.11□□□□□ -1.75
TROAP-210ENST00000549534 PMAIP1Q13794 54 aa4.08□□□□□ -1.76
TROAP-210ENST00000549534 KRTAP19-3Q7Z4W3 81 aa4.08□□□□□ -1.76
TROAP-210ENST00000549534 KRTAP10-7P60409 375 aaPredicted RBP4.06□□□□□ -1.76
TROAP-210ENST00000549534 ROMO1P60602 79 aa4.04□□□□□ -1.76
TROAP-210ENST00000549534 TNP1P09430 55 aa4.03□□□□□ -1.76
TROAP-210ENST00000549534 KRTAP20-2Q3LI61 65 aa4.02□□□□□ -1.77
TROAP-210ENST00000549534 KRTAP25-1Q3LHN0 102 aa4□□□□□ -1.77
TROAP-210ENST00000549534 C10orf95Q9H7T3 257 aa3.92□□□□□ -1.78
TROAP-210ENST00000549534 PP632Q6XCG6 107 aa3.91□□□□□ -1.78
TROAP-210ENST00000549534 KRTAP23-1A1A580 65 aa3.9□□□□□ -1.79
TROAP-210ENST00000549534 MT1GP13640 62 aa3.9□□□□□ -1.79
TROAP-210ENST00000549534 KRTAP5-8O75690 187 aa3.89□□□□□ -1.79
TROAP-210ENST00000549534 MT1EP04732 61 aa3.89□□□□□ -1.79
TROAP-210ENST00000549534 KRTAP19-7Q3SYF9 63 aa3.86□□□□□ -1.79
TROAP-210ENST00000549534 KTN1-AS1Q86SY8 53 aa3.84□□□□□ -1.79
TROAP-210ENST00000549534 SVIPQ8NHG7 77 aa3.78□□□□□ -1.8
TROAP-210ENST00000549534 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.77□□□□□ -1.81
TROAP-210ENST00000549534 MT1MQ8N339 61 aa3.77□□□□□ -1.81
TROAP-210ENST00000549534 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
TROAP-210ENST00000549534 SYNE1Q8NF91 8797 aaKnown RBP3.72□□□□□ -1.81
TROAP-210ENST00000549534 LCE3AQ5TA76 89 aa3.68□□□□□ -1.82
TROAP-210ENST00000549534 KRTAP19-4Q3LI73 84 aa3.66□□□□□ -1.82
TROAP-210ENST00000549534 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
TROAP-210ENST00000549534 KRTAP12-3P60328 96 aa3.64□□□□□ -1.83
TROAP-210ENST00000549534 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
TROAP-210ENST00000549534 PRAC1Q96KF2 57 aa3.63□□□□□ -1.83
TROAP-210ENST00000549534 KRTAP19-5Q3LI72 72 aa3.57□□□□□ -1.84
TROAP-210ENST00000549534 KRTAP5-5Q701N2 237 aaPredicted RBP3.57□□□□□ -1.84
TROAP-210ENST00000549534 KRTAP15-1Q3LI76 137 aa3.55□□□□□ -1.84
TROAP-210ENST00000549534 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
TROAP-210ENST00000549534 MT1LQ93083 61 aa3.54□□□□□ -1.84
TROAP-210ENST00000549534 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
TROAP-210ENST00000549534 KRTAP5-1Q6L8H4 278 aa3.32□□□□□ -1.88
TROAP-210ENST00000549534 LUZP6Q538Z0 58 aa3.3□□□□□ -1.88
TROAP-210ENST00000549534 H3BS24 57 aa3.2□□□□□ -1.9
TROAP-210ENST00000549534 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
TROAP-210ENST00000549534 KRTAP6-2Q3LI66 62 aa3.09□□□□□ -1.91
TROAP-210ENST00000549534 MT1AP04731 61 aa3.02□□□□□ -1.93
TROAP-210ENST00000549534 KRTAP6-1Q3LI64 71 aa3.02□□□□□ -1.93
TROAP-210ENST00000549534 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
TROAP-210ENST00000549534 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
TROAP-210ENST00000549534 NDUFAF8A1L188 74 aa2.91□□□□□ -1.94
TROAP-210ENST00000549534 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
TROAP-210ENST00000549534 A0A0A0MQY5 61 aa2.88□□□□□ -1.95
TROAP-210ENST00000549534 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
TROAP-210ENST00000549534 MT3P25713 68 aa2.83□□□□□ -1.96
TROAP-210ENST00000549534 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
TROAP-210ENST00000549534 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
TROAP-210ENST00000549534 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
TROAP-210ENST00000549534 INE1O15225 51 aa2.56□□□□□ -2
TROAP-210ENST00000549534 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
TROAP-210ENST00000549534 LCE3EQ5T5B0 92 aa2.48□□□□□ -2.01
TROAP-210ENST00000549534 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
TROAP-210ENST00000549534 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
TROAP-210ENST00000549534 PRM1P04553 51 aa2.02□□□□□ -2.09
TROAP-210ENST00000549534 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
TROAP-210ENST00000549534 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 99 ms