RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 CRIPTQ9P021 101 aa1.23□□□□□ -2.21
PTCH1-216ENST00000548379 MDN1Q9NU22 5596 aa1.23□□□□□ -2.21
PTCH1-216ENST00000548379 SPRR2DP22532 72 aa1.22□□□□□ -2.21
PTCH1-216ENST00000548379 KRTAP8-1Q8IUC2 63 aa1.22□□□□□ -2.21
PTCH1-216ENST00000548379 VAMP8Q9BV40 100 aa1.22□□□□□ -2.21
PTCH1-216ENST00000548379 KMT2DO14686 5537 aa1.21□□□□□ -2.22
PTCH1-216ENST00000548379 MMP24-AS1A0A0U1RRL7 71 aa1.21□□□□□ -2.22
PTCH1-216ENST00000548379 ATXN8Q156A1 80 aa1.21□□□□□ -2.22
PTCH1-216ENST00000548379 SERP1Q9Y6X1 66 aa1.21□□□□□ -2.22
PTCH1-216ENST00000548379 HCG22E2RYF7 251 aa1.2□□□□□ -2.22
PTCH1-216ENST00000548379 HSD52Q0P140 79 aa1.2□□□□□ -2.22
PTCH1-216ENST00000548379 PLAC4Q8WY50 150 aa1.2□□□□□ -2.22
PTCH1-216ENST00000548379 NDUFC1O43677 76 aa1.18□□□□□ -2.22
PTCH1-216ENST00000548379 GPR98Q8WXG9 6306 aa1.18□□□□□ -2.22
PTCH1-216ENST00000548379 LOC101927531A0A1B0GV80 90 aa1.17□□□□□ -2.22
PTCH1-216ENST00000548379 TP53AIP1Q9HCN2 124 aa1.17□□□□□ -2.22
PTCH1-216ENST00000548379 H0YAA0 97 aa1.16□□□□□ -2.22
PTCH1-216ENST00000548379 UQCR10Q9UDW1 63 aa1.16□□□□□ -2.22
PTCH1-216ENST00000548379 DSTQ03001 7570 aaKnown RBP1.16□□□□□ -2.22
PTCH1-216ENST00000548379 M0R143 59 aa1.15□□□□□ -2.23
PTCH1-216ENST00000548379 C20orf197Q8N268 126 aa1.15□□□□□ -2.23
PTCH1-216ENST00000548379 UBL5Q9BZL1 73 aa1.15□□□□□ -2.23
PTCH1-216ENST00000548379 ACYP1P07311 99 aa1.14□□□□□ -2.23
PTCH1-216ENST00000548379 MT1XP80297 61 aa1.14□□□□□ -2.23
PTCH1-216ENST00000548379 SPTSSBQ8NFR3 76 aa1.14□□□□□ -2.23
PTCH1-216ENST00000548379 LINC00208Q96KT6 92 aa1.14□□□□□ -2.23
PTCH1-216ENST00000548379 TRAV22A0A0B4J277 110 aa1.12□□□□□ -2.23
PTCH1-216ENST00000548379 M0QZ58 72 aa1.12□□□□□ -2.23
PTCH1-216ENST00000548379 SMIM6P0DI80 62 aa1.12□□□□□ -2.23
PTCH1-216ENST00000548379 CYP4F30PQ9H0H9 118 aa1.12□□□□□ -2.23
PTCH1-216ENST00000548379 K7EP34 96 aa1.11□□□□□ -2.23
PTCH1-216ENST00000548379 ATOX1O00244 68 aa1.11□□□□□ -2.23
PTCH1-216ENST00000548379 MT-ATP8P03928 68 aa1.11□□□□□ -2.23
PTCH1-216ENST00000548379 PYY3Q5JQD4 70 aa1.11□□□□□ -2.23
PTCH1-216ENST00000548379 GTF2H5Q6ZYL4 71 aa1.11□□□□□ -2.23
PTCH1-216ENST00000548379 A0A087WVE0 104 aa1.1□□□□□ -2.23
PTCH1-216ENST00000548379 SPCS1Q9Y6A9 102 aa1.09□□□□□ -2.23
PTCH1-216ENST00000548379 A0A1W2PPM0 123 aa1.08□□□□□ -2.24
PTCH1-216ENST00000548379 H0Y9P7 68 aa1.08□□□□□ -2.24
PTCH1-216ENST00000548379 MT4P47944 62 aa1.06□□□□□ -2.24
PTCH1-216ENST00000548379 ATP5EP56381 51 aaPredicted RBP1.05□□□□□ -2.24
PTCH1-216ENST00000548379 KRTAP19-3Q7Z4W3 81 aa1.05□□□□□ -2.24
PTCH1-216ENST00000548379 ATP5EP2Q5VTU8 51 aa1.04□□□□□ -2.24
PTCH1-216ENST00000548379 CHKB-CPT1BH3BT56 60 aa1.03□□□□□ -2.24
PTCH1-216ENST00000548379 MT1EP04732 61 aa1.03□□□□□ -2.24
PTCH1-216ENST00000548379 MT1GP13640 62 aa1.03□□□□□ -2.24
PTCH1-216ENST00000548379 KRTAP5-10Q6L8G5 202 aa1.03□□□□□ -2.24
PTCH1-216ENST00000548379 ACYP2P14621 99 aa1.01□□□□□ -2.25
PTCH1-216ENST00000548379 KRTAP19-7Q3SYF9 63 aa1.01□□□□□ -2.25
PTCH1-216ENST00000548379 COL5A1-AS1Q5SY13 56 aa1.01□□□□□ -2.25
PTCH1-216ENST00000548379 AHNAK2Q8IVF2 5795 aa1□□□□□ -2.25
PTCH1-216ENST00000548379 A0A0D9SG42 100 aa1□□□□□ -2.25
PTCH1-216ENST00000548379 ETDBQ3ZM63 59 aa1□□□□□ -2.25
PTCH1-216ENST00000548379 KRTAP19-5Q3LI72 72 aa0.99□□□□□ -2.25
PTCH1-216ENST00000548379 LINC00643Q86TS7 51 aa0.98□□□□□ -2.25
PTCH1-216ENST00000548379 MT1MQ8N339 61 aa0.98□□□□□ -2.25
PTCH1-216ENST00000548379 MT1LQ93083 61 aa0.96□□□□□ -2.26
PTCH1-216ENST00000548379 KRTAP20-2Q3LI61 65 aa0.95□□□□□ -2.26
PTCH1-216ENST00000548379 TNP1P09430 55 aa0.94□□□□□ -2.26
PTCH1-216ENST00000548379 C10orf95Q9H7T3 257 aa0.94□□□□□ -2.26
PTCH1-216ENST00000548379 SPATA8Q6RVD6 105 aa0.92□□□□□ -2.26
PTCH1-216ENST00000548379 SERP2Q8N6R1 65 aa0.9□□□□□ -2.27
PTCH1-216ENST00000548379 PRR15LQ9BU68 103 aa0.9□□□□□ -2.27
PTCH1-216ENST00000548379 LINC01558Q9Y6Z2 57 aa0.9□□□□□ -2.27
PTCH1-216ENST00000548379 UQCR11O14957 56 aa0.89□□□□□ -2.27
PTCH1-216ENST00000548379 AHNAKQ09666 5890 aaKnown RBP0.88□□□□□ -2.27
PTCH1-216ENST00000548379 A0A1B0GU69 56 aa0.88□□□□□ -2.27
PTCH1-216ENST00000548379 MUC5ACP98088 5654 aa0.87□□□□□ -2.27
PTCH1-216ENST00000548379 SYNE1Q8NF91 8797 aaKnown RBP0.86□□□□□ -2.27
PTCH1-216ENST00000548379 MUC5BQ9HC84 5762 aaPredicted RBP0.83□□□□□ -2.28
PTCH1-216ENST00000548379 H7BZZ5 65 aa0.83□□□□□ -2.28
PTCH1-216ENST00000548379 MT1AP04731 61 aa0.83□□□□□ -2.28
PTCH1-216ENST00000548379 KRTAP6-1Q3LI64 71 aa0.81□□□□□ -2.28
PTCH1-216ENST00000548379 KRTAP6-2Q3LI66 62 aa0.81□□□□□ -2.28
PTCH1-216ENST00000548379 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
PTCH1-216ENST00000548379 PHGR1C9JFL3 82 aa0.64□□□□□ -2.31
PTCH1-216ENST00000548379 KRTAP21-1Q3LI58 79 aa0.51□□□□□ -2.33
PTCH1-216ENST00000548379 PRM1P04553 51 aa0.33□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 41.6 ms