RNA–Protein interactions for RNA: ENST00000545467.5

LDHA-224, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-224ENST00000545467 KRTAP2-2Q9BYT5 123 aa3.57□□□□□ -1.84
LDHA-224ENST00000545467 KRTAP2-1Q9BYU5 128 aa3.57□□□□□ -1.84
LDHA-224ENST00000545467 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
LDHA-224ENST00000545467 KRTAP15-1Q3LI76 137 aa3.52□□□□□ -1.85
LDHA-224ENST00000545467 CAMK2N1Q7Z7J9 78 aa3.51□□□□□ -1.85
LDHA-224ENST00000545467 PP632Q6XCG6 107 aa3.48□□□□□ -1.85
LDHA-224ENST00000545467 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
LDHA-224ENST00000545467 SPRR2GQ9BYE4 73 aa3.45□□□□□ -1.86
LDHA-224ENST00000545467 SPRR2EP22531 72 aa3.44□□□□□ -1.86
LDHA-224ENST00000545467 SPRR2BP35325 72 aa3.44□□□□□ -1.86
LDHA-224ENST00000545467 SPRR2AP35326 72 aa3.44□□□□□ -1.86
LDHA-224ENST00000545467 KRTAP23-1A1A580 65 aa3.42□□□□□ -1.86
LDHA-224ENST00000545467 PLAC4Q8WY50 150 aa3.41□□□□□ -1.86
LDHA-224ENST00000545467 TNP1P09430 55 aa3.4□□□□□ -1.87
LDHA-224ENST00000545467 SPRR2FQ96RM1 72 aa3.37□□□□□ -1.87
LDHA-224ENST00000545467 KRTAP10-5P60370 271 aa3.36□□□□□ -1.87
LDHA-224ENST00000545467 KRTAP10-7P60409 375 aaPredicted RBP3.36□□□□□ -1.87
LDHA-224ENST00000545467 KRTAP19-8Q3LI54 63 aa3.34□□□□□ -1.87
LDHA-224ENST00000545467 SPRR2DP22532 72 aa3.33□□□□□ -1.88
LDHA-224ENST00000545467 LCE1AQ5T7P2 110 aa3.33□□□□□ -1.88
LDHA-224ENST00000545467 DSTQ03001 7570 aaKnown RBP3.32□□□□□ -1.88
LDHA-224ENST00000545467 MT1BP07438 61 aa3.32□□□□□ -1.88
LDHA-224ENST00000545467 KRTAP5-11Q6L8G4 156 aa3.3□□□□□ -1.88
LDHA-224ENST00000545467 NDUFAF8A1L188 74 aa3.2□□□□□ -1.9
LDHA-224ENST00000545467 KRTAP8-1Q8IUC2 63 aa3.2□□□□□ -1.9
LDHA-224ENST00000545467 PRO2289Q9P1D8 64 aa3.2□□□□□ -1.9
LDHA-224ENST00000545467 MT1XP80297 61 aa3.18□□□□□ -1.9
LDHA-224ENST00000545467 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
LDHA-224ENST00000545467 LCE3AQ5TA76 89 aa3.17□□□□□ -1.9
LDHA-224ENST00000545467 HMCN1Q96RW7 5635 aa3.16□□□□□ -1.9
LDHA-224ENST00000545467 AHNAK2Q8IVF2 5795 aa3.15□□□□□ -1.91
LDHA-224ENST00000545467 KRTAP10-12P60413 245 aa3.15□□□□□ -1.91
LDHA-224ENST00000545467 SPRR5A0A1B0GTR4 108 aa3.14□□□□□ -1.91
LDHA-224ENST00000545467 KRTAP5-10Q6L8G5 202 aa3.11□□□□□ -1.91
LDHA-224ENST00000545467 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
LDHA-224ENST00000545467 KRTAP5-7Q6L8G8 165 aa3.07□□□□□ -1.92
LDHA-224ENST00000545467 KRTAP12-3P60328 96 aa3.05□□□□□ -1.92
LDHA-224ENST00000545467 KRTAP5-1Q6L8H4 278 aa2.98□□□□□ -1.93
LDHA-224ENST00000545467 A0A0A0MQY5 61 aa2.95□□□□□ -1.94
LDHA-224ENST00000545467 MT4P47944 62 aa2.95□□□□□ -1.94
LDHA-224ENST00000545467 KRTAP19-5Q3LI72 72 aa2.92□□□□□ -1.94
LDHA-224ENST00000545467 KRTAP5-4Q6L8H1 288 aa2.92□□□□□ -1.94
LDHA-224ENST00000545467 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
LDHA-224ENST00000545467 LCE3CQ5T5A8 94 aa2.85□□□□□ -1.95
LDHA-224ENST00000545467 KRTAP19-7Q3SYF9 63 aa2.83□□□□□ -1.96
LDHA-224ENST00000545467 AHNAKQ09666 5890 aaKnown RBP2.79□□□□□ -1.96
LDHA-224ENST00000545467 MT1EP04732 61 aa2.79□□□□□ -1.96
LDHA-224ENST00000545467 KRTAP19-3Q7Z4W3 81 aa2.78□□□□□ -1.96
LDHA-224ENST00000545467 MT1LQ93083 61 aa2.76□□□□□ -1.97
LDHA-224ENST00000545467 INE1O15225 51 aa2.73□□□□□ -1.97
LDHA-224ENST00000545467 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
LDHA-224ENST00000545467 MUC5ACP98088 5654 aa2.67□□□□□ -1.98
LDHA-224ENST00000545467 KRTAP9-6A8MVA2 160 aa2.66□□□□□ -1.98
LDHA-224ENST00000545467 MT1GP13640 62 aa2.66□□□□□ -1.98
LDHA-224ENST00000545467 MT3P25713 68 aa2.66□□□□□ -1.98
LDHA-224ENST00000545467 KRTAP20-2Q3LI61 65 aa2.65□□□□□ -1.99
LDHA-224ENST00000545467 MT1MQ8N339 61 aa2.61□□□□□ -1.99
LDHA-224ENST00000545467 OBSCNQ5VST9 7968 aa2.57□□□□□ -2
LDHA-224ENST00000545467 KRTAP12-4P60329 112 aa2.52□□□□□ -2.01
LDHA-224ENST00000545467 KRTAP4-3Q9BYR4 195 aa2.52□□□□□ -2.01
LDHA-224ENST00000545467 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
LDHA-224ENST00000545467 SYNE1Q8NF91 8797 aaKnown RBP2.47□□□□□ -2.01
LDHA-224ENST00000545467 KRTAP5-2Q701N4 177 aa2.44□□□□□ -2.02
LDHA-224ENST00000545467 KRTAP5-5Q701N2 237 aaPredicted RBP2.43□□□□□ -2.02
LDHA-224ENST00000545467 MT1AP04731 61 aa2.38□□□□□ -2.03
LDHA-224ENST00000545467 KRTAP6-1Q3LI64 71 aa2.3□□□□□ -2.04
LDHA-224ENST00000545467 LCE1FQ5T754 118 aa2.21□□□□□ -2.06
LDHA-224ENST00000545467 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
LDHA-224ENST00000545467 LCE3EQ5T5B0 92 aa2.16□□□□□ -2.06
LDHA-224ENST00000545467 KRTAP6-2Q3LI66 62 aa2.12□□□□□ -2.07
LDHA-224ENST00000545467 LCE1CQ5T751 118 aa1.99□□□□□ -2.09
LDHA-224ENST00000545467 LCE1BQ5T7P3 118 aa1.99□□□□□ -2.09
LDHA-224ENST00000545467 PRM1P04553 51 aa1.97□□□□□ -2.09
LDHA-224ENST00000545467 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
LDHA-224ENST00000545467 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
LDHA-224ENST00000545467 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
LDHA-224ENST00000545467 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
LDHA-224ENST00000545467 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 100.2 ms