RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
LDHA-223ENST00000545215 WFDC13Q8IUB5 93 aa3.38□□□□□ -1.87
LDHA-223ENST00000545215 SPRR2DP22532 72 aa3.37□□□□□ -1.87
LDHA-223ENST00000545215 DMAC1Q96GE9 116 aa3.37□□□□□ -1.87
LDHA-223ENST00000545215 A0A1B0GU69 56 aa3.35□□□□□ -1.87
LDHA-223ENST00000545215 HRES1P13985 223 aa3.33□□□□□ -1.88
LDHA-223ENST00000545215 ACYP2P14621 99 aa3.32□□□□□ -1.88
LDHA-223ENST00000545215 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
LDHA-223ENST00000545215 Q5W150 140 aa3.31□□□□□ -1.88
LDHA-223ENST00000545215 SPRR2FQ96RM1 72 aa3.31□□□□□ -1.88
LDHA-223ENST00000545215 DSTQ03001 7570 aaKnown RBP3.31□□□□□ -1.88
LDHA-223ENST00000545215 P0C880 135 aa3.29□□□□□ -1.88
LDHA-223ENST00000545215 HMCN1Q96RW7 5635 aa3.26□□□□□ -1.89
LDHA-223ENST00000545215 SPINT4Q6UDR6 99 aa3.23□□□□□ -1.89
LDHA-223ENST00000545215 KRTAP10-5P60370 271 aa3.21□□□□□ -1.89
LDHA-223ENST00000545215 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.89
LDHA-223ENST00000545215 H1FX-AS1Q4G0G2 97 aa3.17□□□□□ -1.9
LDHA-223ENST00000545215 KRTAP10-7P60409 375 aaPredicted RBP3.11□□□□□ -1.91
LDHA-223ENST00000545215 LCE1EQ5T753 118 aa3.11□□□□□ -1.91
LDHA-223ENST00000545215 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
LDHA-223ENST00000545215 S4R3F8 94 aa3.09□□□□□ -1.91
LDHA-223ENST00000545215 H0YAA0 97 aa3.04□□□□□ -1.92
LDHA-223ENST00000545215 AHNAKQ09666 5890 aaKnown RBP3.04□□□□□ -1.92
LDHA-223ENST00000545215 A0A1B0GU33 70 aa3.02□□□□□ -1.93
LDHA-223ENST00000545215 KRTAP8-1Q8IUC2 63 aa3.02□□□□□ -1.93
LDHA-223ENST00000545215 MT1BP07438 61 aa3.01□□□□□ -1.93
LDHA-223ENST00000545215 MT4P47944 62 aa3.01□□□□□ -1.93
LDHA-223ENST00000545215 KRTAP12-2P59991 146 aa3.01□□□□□ -1.93
LDHA-223ENST00000545215 CRIPTQ9P021 101 aa3.01□□□□□ -1.93
LDHA-223ENST00000545215 MUC5BQ9HC84 5762 aaPredicted RBP2.96□□□□□ -1.94
LDHA-223ENST00000545215 KRTAP5-1Q6L8H4 278 aa2.94□□□□□ -1.94
LDHA-223ENST00000545215 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
LDHA-223ENST00000545215 MUC5ACP98088 5654 aa2.93□□□□□ -1.94
LDHA-223ENST00000545215 KRTAP9-6A8MVA2 160 aa2.9□□□□□ -1.95
LDHA-223ENST00000545215 PRO2289Q9P1D8 64 aa2.9□□□□□ -1.95
LDHA-223ENST00000545215 PLAC4Q8WY50 150 aa2.89□□□□□ -1.95
LDHA-223ENST00000545215 KRTAP19-8Q3LI54 63 aa2.88□□□□□ -1.95
LDHA-223ENST00000545215 SPRR2GQ9BYE4 73 aa2.87□□□□□ -1.95
LDHA-223ENST00000545215 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
LDHA-223ENST00000545215 R4GN34 69 aa2.87□□□□□ -1.95
LDHA-223ENST00000545215 M0QZ58 72 aa2.86□□□□□ -1.95
LDHA-223ENST00000545215 C10orf95Q9H7T3 257 aa2.82□□□□□ -1.96
LDHA-223ENST00000545215 INE1O15225 51 aa2.78□□□□□ -1.96
LDHA-223ENST00000545215 KRTAP13-4Q3LI77 160 aa2.72□□□□□ -1.97
LDHA-223ENST00000545215 PP632Q6XCG6 107 aa2.7□□□□□ -1.98
LDHA-223ENST00000545215 A0A0D9SG42 100 aa2.69□□□□□ -1.98
LDHA-223ENST00000545215 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
LDHA-223ENST00000545215 MT1XP80297 61 aa2.66□□□□□ -1.98
LDHA-223ENST00000545215 KRTAP5-8O75690 187 aa2.65□□□□□ -1.99
LDHA-223ENST00000545215 KRTAP12-1P59990 96 aa2.65□□□□□ -1.99
LDHA-223ENST00000545215 KRTAP20-2Q3LI61 65 aa2.63□□□□□ -1.99
LDHA-223ENST00000545215 TNP1P09430 55 aa2.52□□□□□ -2.01
LDHA-223ENST00000545215 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
LDHA-223ENST00000545215 KRTAP19-3Q7Z4W3 81 aa2.52□□□□□ -2.01
LDHA-223ENST00000545215 OBSCNQ5VST9 7968 aa2.52□□□□□ -2.01
LDHA-223ENST00000545215 KRTAP4-3Q9BYR4 195 aa2.47□□□□□ -2.01
LDHA-223ENST00000545215 LCE3AQ5TA76 89 aa2.46□□□□□ -2.02
LDHA-223ENST00000545215 MT1GP13640 62 aa2.39□□□□□ -2.03
LDHA-223ENST00000545215 KRTAP19-7Q3SYF9 63 aa2.38□□□□□ -2.03
LDHA-223ENST00000545215 MT1EP04732 61 aa2.37□□□□□ -2.03
LDHA-223ENST00000545215 KRTAP12-4P60329 112 aa2.37□□□□□ -2.03
LDHA-223ENST00000545215 SYNE1Q8NF91 8797 aaKnown RBP2.35□□□□□ -2.03
LDHA-223ENST00000545215 KRTAP19-5Q3LI72 72 aa2.33□□□□□ -2.04
LDHA-223ENST00000545215 KRTAP12-3P60328 96 aa2.32□□□□□ -2.04
LDHA-223ENST00000545215 KRTAP5-5Q701N2 237 aaPredicted RBP2.31□□□□□ -2.04
LDHA-223ENST00000545215 MT1MQ8N339 61 aa2.31□□□□□ -2.04
LDHA-223ENST00000545215 MT1LQ93083 61 aa2.25□□□□□ -2.05
LDHA-223ENST00000545215 LCE1CQ5T751 118 aa2.1□□□□□ -2.07
LDHA-223ENST00000545215 LCE1BQ5T7P3 118 aa2.1□□□□□ -2.07
LDHA-223ENST00000545215 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
LDHA-223ENST00000545215 MT1AP04731 61 aa1.94□□□□□ -2.1
LDHA-223ENST00000545215 KRTAP6-2Q3LI66 62 aa1.92□□□□□ -2.1
LDHA-223ENST00000545215 KRTAP6-1Q3LI64 71 aa1.9□□□□□ -2.11
LDHA-223ENST00000545215 PRM1P04553 51 aa1.63□□□□□ -2.15
LDHA-223ENST00000545215 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
LDHA-223ENST00000545215 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
LDHA-223ENST00000545215 KRTAP21-2Q3LI59 83 aa1.47□□□□□ -2.17
LDHA-223ENST00000545215 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 9.3 ms