RNA–Protein interactions for RNA: ENST00000544154.1

NPIPB3-213, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-213ENST00000544154 VPS13BQ7Z7G8 4022 aa0.36□□□□□ -2.35
NPIPB3-213ENST00000544154 KRTAP19-6Q3LI70 58 aa0.36□□□□□ -2.35
NPIPB3-213ENST00000544154 MUC17Q685J3 4493 aa0.36□□□□□ -2.35
NPIPB3-213ENST00000544154 LPAP08519 4548 aa0.36□□□□□ -2.35
NPIPB3-213ENST00000544154 MMP24-AS1A0A0U1RRL7 71 aa0.35□□□□□ -2.35
NPIPB3-213ENST00000544154 A8MTW9 85 aa0.34□□□□□ -2.36
NPIPB3-213ENST00000544154 PRM1P04553 51 aa0.34□□□□□ -2.36
NPIPB3-213ENST00000544154 DEFB110Q30KQ9 67 aa0.34□□□□□ -2.36
NPIPB3-213ENST00000544154 TNP1P09430 55 aa0.33□□□□□ -2.36
NPIPB3-213ENST00000544154 SPRR2EP22531 72 aa0.33□□□□□ -2.36
NPIPB3-213ENST00000544154 SPRR2BP35325 72 aa0.33□□□□□ -2.36
NPIPB3-213ENST00000544154 SPRR2AP35326 72 aa0.33□□□□□ -2.36
NPIPB3-213ENST00000544154 DNAH8Q96JB1 4490 aa0.32□□□□□ -2.36
NPIPB3-213ENST00000544154 M0QZ58 72 aa0.32□□□□□ -2.36
NPIPB3-213ENST00000544154 SPRR2DP22532 72 aa0.32□□□□□ -2.36
NPIPB3-213ENST00000544154 SNRPGP62308 76 aaKnown RBP0.32□□□□□ -2.36
NPIPB3-213ENST00000544154 SPART-AS1P0CW21 52 aa0.31□□□□□ -2.36
NPIPB3-213ENST00000544154 MT4P47944 62 aa0.31□□□□□ -2.36
NPIPB3-213ENST00000544154 POLR2KP53803 58 aaKnown RBP0.31□□□□□ -2.36
NPIPB3-213ENST00000544154 PHGR1C9JFL3 82 aa0.3□□□□□ -2.36
NPIPB3-213ENST00000544154 TOMM7Q9P0U1 55 aa0.3□□□□□ -2.36
NPIPB3-213ENST00000544154 SYNE1Q8NF91 8797 aaKnown RBP0.3□□□□□ -2.36
NPIPB3-213ENST00000544154 SMR3BP02814 79 aaPredicted RBP0.29□□□□□ -2.36
NPIPB3-213ENST00000544154 MT1HL1P0DM35 61 aa0.28□□□□□ -2.36
NPIPB3-213ENST00000544154 CLPSL2Q6UWE3 100 aa0.28□□□□□ -2.36
NPIPB3-213ENST00000544154 RPL39P62891 51 aaKnown RBP0.27□□□□□ -2.37
NPIPB3-213ENST00000544154 KRTAP21-1Q3LI58 79 aa0.27□□□□□ -2.37
NPIPB3-213ENST00000544154 MT1HP80294 61 aa0.26□□□□□ -2.37
NPIPB3-213ENST00000544154 FLGP20930 4061 aaPredicted RBP0.26□□□□□ -2.37
NPIPB3-213ENST00000544154 RPL39LQ96EH5 51 aaKnown RBP0.25□□□□□ -2.37
NPIPB3-213ENST00000544154 SPRR2FQ96RM1 72 aa0.25□□□□□ -2.37
NPIPB3-213ENST00000544154 STATHP02808 62 aa0.24□□□□□ -2.37
NPIPB3-213ENST00000544154 LEAP2Q969E1 77 aa0.24□□□□□ -2.37
NPIPB3-213ENST00000544154 KRTAP19-2Q3LHN2 52 aa0.23□□□□□ -2.37
NPIPB3-213ENST00000544154 DEFB104AQ8WTQ1 72 aa0.23□□□□□ -2.37
NPIPB3-213ENST00000544154 KRTAP20-2Q3LI61 65 aa0.22□□□□□ -2.37
NPIPB3-213ENST00000544154 LINC01590Q5TEZ4 76 aa0.22□□□□□ -2.37
NPIPB3-213ENST00000544154 Q9Y3F1 56 aa0.21□□□□□ -2.38
NPIPB3-213ENST00000544154 CD52P31358 61 aa0.2□□□□□ -2.38
NPIPB3-213ENST00000544154 ARHGAP5-AS1Q96IT6 56 aa0.2□□□□□ -2.38
NPIPB3-213ENST00000544154 SPRR2GQ9BYE4 73 aa0.2□□□□□ -2.38
NPIPB3-213ENST00000544154 DEFB1P60022 68 aa0.19□□□□□ -2.38
NPIPB3-213ENST00000544154 KRTAP6-2Q3LI66 62 aa0.19□□□□□ -2.38
NPIPB3-213ENST00000544154 MT2AP02795 61 aa0.18□□□□□ -2.38
NPIPB3-213ENST00000544154 MT1AP04731 61 aa0.18□□□□□ -2.38
NPIPB3-213ENST00000544154 MT1FP04733 61 aa0.18□□□□□ -2.38
NPIPB3-213ENST00000544154 DEFB108AA8MXU0 73 aa0.17□□□□□ -2.38
NPIPB3-213ENST00000544154 RHPN1-AS1Q9BWJ2 59 aa0.17□□□□□ -2.38
NPIPB3-213ENST00000544154 DEFB133Q30KQ1 61 aa0.15□□□□□ -2.39
NPIPB3-213ENST00000544154 KRTAP8-1Q8IUC2 63 aa0.15□□□□□ -2.39
NPIPB3-213ENST00000544154 TTTY10Q9BZA0 68 aa0.15□□□□□ -2.39
NPIPB3-213ENST00000544154 PRCDQ00LT1 54 aa0.14□□□□□ -2.39
NPIPB3-213ENST00000544154 A0A096LNI7 61 aa0.13□□□□□ -2.39
NPIPB3-213ENST00000544154 H3BSH0 61 aa0.12□□□□□ -2.39
NPIPB3-213ENST00000544154 K7EIM0 57 aa0.12□□□□□ -2.39
NPIPB3-213ENST00000544154 HTN1P15515 57 aa0.12□□□□□ -2.39
NPIPB3-213ENST00000544154 DEFB136Q30KP8 78 aa0.11□□□□□ -2.39
NPIPB3-213ENST00000544154 H3BUX3 64 aa0.09□□□□□ -2.4
NPIPB3-213ENST00000544154 MT1BP07438 61 aa0.09□□□□□ -2.4
NPIPB3-213ENST00000544154 KRTAP19-7Q3SYF9 63 aa0.09□□□□□ -2.4
NPIPB3-213ENST00000544154 KRTAP19-5Q3LI72 72 aa0.08□□□□□ -2.4
NPIPB3-213ENST00000544154 DEFB108BQ8NET1 73 aa0.08□□□□□ -2.4
NPIPB3-213ENST00000544154 KRTAP19-8Q3LI54 63 aa0.07□□□□□ -2.4
NPIPB3-213ENST00000544154 TMEM167AQ8TBQ9 72 aa0.07□□□□□ -2.4
NPIPB3-213ENST00000544154 KRTAP6-1Q3LI64 71 aa0.05□□□□□ -2.4
NPIPB3-213ENST00000544154 DEFB4AO15263 64 aa0.04□□□□□ -2.4
NPIPB3-213ENST00000544154 RPL39P5Q59GN2 51 aa0.03□□□□□ -2.4
NPIPB3-213ENST00000544154 MT1MQ8N339 61 aa0.03□□□□□ -2.4
NPIPB3-213ENST00000544154 MT1EP04732 61 aa0.02□□□□□ -2.41
NPIPB3-213ENST00000544154 MT1GP13640 62 aa0□□□□□ -2.41
NPIPB3-213ENST00000544154 MT1XP80297 61 aa0□□□□□ -2.41
NPIPB3-213ENST00000544154 MT1LQ93083 61 aa0□□□□□ -2.41
NPIPB3-213ENST00000544154 APELAP0DMC3 54 aa-0.02□□□□□ -2.41
NPIPB3-213ENST00000544154 RPS29P62273 56 aaKnown RBP-0.02□□□□□ -2.41
NPIPB3-213ENST00000544154 HTN3P15516 51 aa-0.05□□□□□ -2.42
NPIPB3-213ENST00000544154 A0A096LPF7 62 aa-0.06□□□□□ -2.42
NPIPB3-213ENST00000544154 LINC01556Q5JQF7 62 aa-0.06□□□□□ -2.42
NPIPB3-213ENST00000544154 COX14Q96I36 57 aa-0.07□□□□□ -2.42
Retrieved 78 of 20,778 RNA–protein pairs in 62.7 ms