RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 CYSTM1Q9H1C7 97 aa2.11□□□□□ -2.07
NPIPB4-219ENST00000543660 LINC01558Q9Y6Z2 57 aa2.11□□□□□ -2.07
NPIPB4-219ENST00000543660 LEPROTL1O95214 131 aa2.1□□□□□ -2.07
NPIPB4-219ENST00000543660 LINC00575Q6W349 94 aa2.1□□□□□ -2.07
NPIPB4-219ENST00000543660 SMIM11BQ8TCY0 68 aa2.1□□□□□ -2.07
NPIPB4-219ENST00000543660 ZCCHC13Q8WW36 166 aaKnown RBP2.1□□□□□ -2.07
NPIPB4-219ENST00000543660 IGKV4-1P06312 121 aa2.09□□□□□ -2.07
NPIPB4-219ENST00000543660 H1FX-AS1Q4G0G2 97 aa2.09□□□□□ -2.07
NPIPB4-219ENST00000543660 KRTAP8-1Q8IUC2 63 aa2.09□□□□□ -2.07
NPIPB4-219ENST00000543660 MUSTN1Q8IVN3 82 aa2.09□□□□□ -2.07
NPIPB4-219ENST00000543660 KRTAP5-7Q6L8G8 165 aa2.08□□□□□ -2.08
NPIPB4-219ENST00000543660 PP632Q6XCG6 107 aa2.08□□□□□ -2.08
NPIPB4-219ENST00000543660 LINC00208Q96KT6 92 aa2.07□□□□□ -2.08
NPIPB4-219ENST00000543660 LCE3AQ5TA76 89 aa2.05□□□□□ -2.08
NPIPB4-219ENST00000543660 PRR15LQ9BU68 103 aa2.05□□□□□ -2.08
NPIPB4-219ENST00000543660 LINC00472Q9H8W2 130 aa2.05□□□□□ -2.08
NPIPB4-219ENST00000543660 C3orf79P0CE67 100 aa2.04□□□□□ -2.08
NPIPB4-219ENST00000543660 LCE3CQ5T5A8 94 aa2.03□□□□□ -2.08
NPIPB4-219ENST00000543660 ACYP2P14621 99 aa2.02□□□□□ -2.09
NPIPB4-219ENST00000543660 ATP5EP2Q5VTU8 51 aa2.02□□□□□ -2.09
NPIPB4-219ENST00000543660 KRTAP12-2P59991 146 aa2.01□□□□□ -2.09
NPIPB4-219ENST00000543660 MT1XP80297 61 aa2.01□□□□□ -2.09
NPIPB4-219ENST00000543660 TRBV7-4A0A0J9YYF1 115 aa2□□□□□ -2.09
NPIPB4-219ENST00000543660 SPRR5A0A1B0GTR4 108 aa2□□□□□ -2.09
NPIPB4-219ENST00000543660 NDUFB1O75438 58 aa1.99□□□□□ -2.09
NPIPB4-219ENST00000543660 COX8AP10176 69 aa1.97□□□□□ -2.09
NPIPB4-219ENST00000543660 KRTAP13-4Q3LI77 160 aa1.97□□□□□ -2.09
NPIPB4-219ENST00000543660 A0A087WVE0 104 aa1.96□□□□□ -2.1
NPIPB4-219ENST00000543660 H0Y9P7 68 aa1.95□□□□□ -2.1
NPIPB4-219ENST00000543660 PLAC4Q8WY50 150 aa1.95□□□□□ -2.1
NPIPB4-219ENST00000543660 CRIPTQ9P021 101 aa1.95□□□□□ -2.1
NPIPB4-219ENST00000543660 SPATA8Q6RVD6 105 aa1.94□□□□□ -2.1
NPIPB4-219ENST00000543660 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
NPIPB4-219ENST00000543660 H0YGX0 51 aa1.93□□□□□ -2.1
NPIPB4-219ENST00000543660 S4R3F8 94 aa1.93□□□□□ -2.1
NPIPB4-219ENST00000543660 MT4P47944 62 aa1.92□□□□□ -2.1
NPIPB4-219ENST00000543660 ATXN8Q156A1 80 aa1.91□□□□□ -2.1
NPIPB4-219ENST00000543660 KRTAP5-5Q701N2 237 aaPredicted RBP1.89□□□□□ -2.11
NPIPB4-219ENST00000543660 MRPL34Q9BQ48 92 aaKnown RBP1.89□□□□□ -2.11
NPIPB4-219ENST00000543660 MMP24-AS1A0A0U1RRL7 71 aa1.88□□□□□ -2.11
NPIPB4-219ENST00000543660 KRTAP5-8O75690 187 aa1.87□□□□□ -2.11
NPIPB4-219ENST00000543660 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
NPIPB4-219ENST00000543660 MUC5ACP98088 5654 aa1.86□□□□□ -2.11
NPIPB4-219ENST00000543660 K7EQZ3 153 aa1.86□□□□□ -2.11
NPIPB4-219ENST00000543660 A0A1B0GU69 56 aa1.85□□□□□ -2.11
NPIPB4-219ENST00000543660 LCE1CQ5T751 118 aa1.84□□□□□ -2.11
NPIPB4-219ENST00000543660 LCE1BQ5T7P3 118 aa1.84□□□□□ -2.11
NPIPB4-219ENST00000543660 H0YAA0 97 aa1.83□□□□□ -2.12
NPIPB4-219ENST00000543660 LCE3EQ5T5B0 92 aa1.83□□□□□ -2.12
NPIPB4-219ENST00000543660 KRTAP19-3Q7Z4W3 81 aa1.83□□□□□ -2.12
NPIPB4-219ENST00000543660 KRTAP12-1P59990 96 aa1.81□□□□□ -2.12
NPIPB4-219ENST00000543660 KRTAP19-7Q3SYF9 63 aa1.81□□□□□ -2.12
NPIPB4-219ENST00000543660 MT1EP04732 61 aa1.8□□□□□ -2.12
NPIPB4-219ENST00000543660 NREPQ16612 68 aa1.8□□□□□ -2.12
NPIPB4-219ENST00000543660 UBL5Q9BZL1 73 aa1.78□□□□□ -2.12
NPIPB4-219ENST00000543660 MT1GP13640 62 aa1.76□□□□□ -2.13
NPIPB4-219ENST00000543660 KRTAP20-2Q3LI61 65 aa1.74□□□□□ -2.13
NPIPB4-219ENST00000543660 M0QZ58 72 aa1.73□□□□□ -2.13
NPIPB4-219ENST00000543660 MT1MQ8N339 61 aa1.73□□□□□ -2.13
NPIPB4-219ENST00000543660 KRTAP19-5Q3LI72 72 aa1.67□□□□□ -2.14
NPIPB4-219ENST00000543660 MT1LQ93083 61 aa1.67□□□□□ -2.14
NPIPB4-219ENST00000543660 TP53AIP1Q9HCN2 124 aa1.67□□□□□ -2.14
NPIPB4-219ENST00000543660 SYNE1Q8NF91 8797 aaKnown RBP1.64□□□□□ -2.15
NPIPB4-219ENST00000543660 LCE3DQ9BYE3 92 aa1.64□□□□□ -2.15
NPIPB4-219ENST00000543660 KRTAP12-4P60329 112 aa1.62□□□□□ -2.15
NPIPB4-219ENST00000543660 A0A0D9SG42 100 aa1.6□□□□□ -2.15
NPIPB4-219ENST00000543660 C10orf95Q9H7T3 257 aa1.59□□□□□ -2.15
NPIPB4-219ENST00000543660 KRTAP12-3P60328 96 aa1.54□□□□□ -2.16
NPIPB4-219ENST00000543660 MUC19Q7Z5P9 8384 aa1.51□□□□□ -2.17
NPIPB4-219ENST00000543660 KRTAP6-1Q3LI64 71 aa1.43□□□□□ -2.18
NPIPB4-219ENST00000543660 KRTAP6-2Q3LI66 62 aa1.42□□□□□ -2.18
NPIPB4-219ENST00000543660 MT1AP04731 61 aa1.4□□□□□ -2.19
NPIPB4-219ENST00000543660 TNP1P09430 55 aa1.36□□□□□ -2.19
NPIPB4-219ENST00000543660 KRTAP21-2Q3LI59 83 aa1.32□□□□□ -2.2
NPIPB4-219ENST00000543660 PHGR1C9JFL3 82 aa1.22□□□□□ -2.21
NPIPB4-219ENST00000543660 KRTAP21-1Q3LI58 79 aa0.93□□□□□ -2.26
NPIPB4-219ENST00000543660 PRM1P04553 51 aa0.84□□□□□ -2.27
NPIPB4-219ENST00000543660 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 45 ms