RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-215	ENST00000542133	KRTAP12-2	P59991	146 aa		3.64	□□□□□ -1.83
NPIPB4-215	ENST00000542133	IGFL1	Q6UW32	110 aa		3.64	□□□□□ -1.83
NPIPB4-215	ENST00000542133	MRPL34	Q9BQ48	92 aa	Known RBP	3.64	□□□□□ -1.83
NPIPB4-215	ENST00000542133		H0YAA0	97 aa		3.62	□□□□□ -1.83
NPIPB4-215	ENST00000542133	PP632	Q6XCG6	107 aa		3.61	□□□□□ -1.83
NPIPB4-215	ENST00000542133	KRTAP2-2	Q9BYT5	123 aa		3.61	□□□□□ -1.83
NPIPB4-215	ENST00000542133	KRTAP2-1	Q9BYU5	128 aa		3.59	□□□□□ -1.83
NPIPB4-215	ENST00000542133	KRTAP5-11	Q6L8G4	156 aa		3.56	□□□□□ -1.84
NPIPB4-215	ENST00000542133	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.56	□□□□□ -1.84
NPIPB4-215	ENST00000542133	MMP24-AS1	A0A0U1RRL7	71 aa		3.55	□□□□□ -1.84
NPIPB4-215	ENST00000542133	SPRR2E	P22531	72 aa		3.53	□□□□□ -1.84
NPIPB4-215	ENST00000542133	SPRR2B	P35325	72 aa		3.53	□□□□□ -1.84
NPIPB4-215	ENST00000542133	SPRR2A	P35326	72 aa		3.53	□□□□□ -1.84
NPIPB4-215	ENST00000542133	H1FX-AS1	Q4G0G2	97 aa		3.52	□□□□□ -1.85
NPIPB4-215	ENST00000542133	MT1B	P07438	61 aa		3.51	□□□□□ -1.85
NPIPB4-215	ENST00000542133	KRTAP10-5	P60370	271 aa		3.51	□□□□□ -1.85
NPIPB4-215	ENST00000542133	SPRR2F	Q96RM1	72 aa		3.48	□□□□□ -1.85
NPIPB4-215	ENST00000542133	LCE1E	Q5T753	118 aa		3.45	□□□□□ -1.86
NPIPB4-215	ENST00000542133	C10orf95	Q9H7T3	257 aa		3.43	□□□□□ -1.86
NPIPB4-215	ENST00000542133	SPRR2D	P22532	72 aa		3.42	□□□□□ -1.86
NPIPB4-215	ENST00000542133	KRTAP19-8	Q3LI54	63 aa		3.42	□□□□□ -1.86
NPIPB4-215	ENST00000542133	DST	Q03001	7570 aa	Known RBP	3.39	□□□□□ -1.87
NPIPB4-215	ENST00000542133	MT3	P25713	68 aa		3.36	□□□□□ -1.87
NPIPB4-215	ENST00000542133	SPRR2G	Q9BYE4	73 aa		3.36	□□□□□ -1.87
NPIPB4-215	ENST00000542133	SPRR5	A0A1B0GTR4	108 aa		3.32	□□□□□ -1.88
NPIPB4-215	ENST00000542133	KRTAP8-1	Q8IUC2	63 aa		3.32	□□□□□ -1.88
NPIPB4-215	ENST00000542133	HMCN1	Q96RW7	5635 aa		3.27	□□□□□ -1.89
NPIPB4-215	ENST00000542133	KRTAP13-4	Q3LI77	160 aa		3.26	□□□□□ -1.89
NPIPB4-215	ENST00000542133	AHNAK2	Q8IVF2	5795 aa		3.26	□□□□□ -1.89
NPIPB4-215	ENST00000542133	MT1X	P80297	61 aa		3.18	□□□□□ -1.9
NPIPB4-215	ENST00000542133		S4R3F8	94 aa		3.18	□□□□□ -1.9
NPIPB4-215	ENST00000542133	KRTAP5-10	Q6L8G5	202 aa		3.14	□□□□□ -1.91
NPIPB4-215	ENST00000542133	KRTAP5-1	Q6L8H4	278 aa		3.11	□□□□□ -1.91
NPIPB4-215	ENST00000542133	KRTAP5-7	Q6L8G8	165 aa		3.07	□□□□□ -1.92
NPIPB4-215	ENST00000542133	MT4	P47944	62 aa		3.03	□□□□□ -1.92
NPIPB4-215	ENST00000542133	KRTAP9-6	A8MVA2	160 aa		3.02	□□□□□ -1.93
NPIPB4-215	ENST00000542133	KRTAP10-12	P60413	245 aa		3.01	□□□□□ -1.93
NPIPB4-215	ENST00000542133	KRTAP12-1	P59990	96 aa		2.98	□□□□□ -1.93
NPIPB4-215	ENST00000542133	KRTAP5-4	Q6L8H1	288 aa		2.98	□□□□□ -1.93
NPIPB4-215	ENST00000542133	KRTAP4-4	Q9BYR3	166 aa		2.98	□□□□□ -1.93
NPIPB4-215	ENST00000542133		A0A0D9SG42	100 aa		2.95	□□□□□ -1.94
NPIPB4-215	ENST00000542133	LCE1F	Q5T754	118 aa		2.95	□□□□□ -1.94
NPIPB4-215	ENST00000542133	KRTAP19-3	Q7Z4W3	81 aa		2.91	□□□□□ -1.94
NPIPB4-215	ENST00000542133		M0QZ58	72 aa		2.88	□□□□□ -1.95
NPIPB4-215	ENST00000542133	AHNAK	Q09666	5890 aa	Known RBP	2.86	□□□□□ -1.95
NPIPB4-215	ENST00000542133	MT1E	P04732	61 aa		2.85	□□□□□ -1.95
NPIPB4-215	ENST00000542133	KRTAP19-7	Q3SYF9	63 aa		2.85	□□□□□ -1.95
NPIPB4-215	ENST00000542133	LCE3C	Q5T5A8	94 aa		2.83	□□□□□ -1.96
NPIPB4-215	ENST00000542133	MUC5AC	P98088	5654 aa		2.78	□□□□□ -1.96
NPIPB4-215	ENST00000542133	MT1G	P13640	62 aa		2.77	□□□□□ -1.97
NPIPB4-215	ENST00000542133	OBSCN	Q5VST9	7968 aa		2.76	□□□□□ -1.97
NPIPB4-215	ENST00000542133	KRTAP20-2	Q3LI61	65 aa		2.74	□□□□□ -1.97
NPIPB4-215	ENST00000542133	MT1M	Q8N339	61 aa		2.74	□□□□□ -1.97
NPIPB4-215	ENST00000542133	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.74	□□□□□ -1.97
NPIPB4-215	ENST00000542133	KRTAP4-3	Q9BYR4	195 aa		2.7	□□□□□ -1.98
NPIPB4-215	ENST00000542133	KRTAP12-4	P60329	112 aa		2.69	□□□□□ -1.98
NPIPB4-215	ENST00000542133	KRTAP19-5	Q3LI72	72 aa		2.65	□□□□□ -1.99
NPIPB4-215	ENST00000542133	MT1L	Q93083	61 aa		2.64	□□□□□ -1.99
NPIPB4-215	ENST00000542133	SYNE1	Q8NF91	8797 aa	Known RBP	2.62	□□□□□ -1.99
NPIPB4-215	ENST00000542133	LCE3A	Q5TA76	89 aa		2.61	□□□□□ -1.99
NPIPB4-215	ENST00000542133	LCE3E	Q5T5B0	92 aa		2.58	□□□□□ -2
NPIPB4-215	ENST00000542133	TNP1	P09430	55 aa		2.57	□□□□□ -2
NPIPB4-215	ENST00000542133	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.57	□□□□□ -2
NPIPB4-215	ENST00000542133	KRTAP5-8	O75690	187 aa		2.56	□□□□□ -2
NPIPB4-215	ENST00000542133	KRTAP5-2	Q701N4	177 aa		2.45	□□□□□ -2.02
NPIPB4-215	ENST00000542133	KRTAP12-3	P60328	96 aa		2.37	□□□□□ -2.03
NPIPB4-215	ENST00000542133	KRTAP6-1	Q3LI64	71 aa		2.26	□□□□□ -2.05
NPIPB4-215	ENST00000542133	LCE3D	Q9BYE3	92 aa		2.26	□□□□□ -2.05
NPIPB4-215	ENST00000542133	LCE1C	Q5T751	118 aa		2.25	□□□□□ -2.05
NPIPB4-215	ENST00000542133	LCE1B	Q5T7P3	118 aa		2.25	□□□□□ -2.05
NPIPB4-215	ENST00000542133	MT1A	P04731	61 aa		2.24	□□□□□ -2.05
NPIPB4-215	ENST00000542133	KRTAP6-2	Q3LI66	62 aa		2.24	□□□□□ -2.05
NPIPB4-215	ENST00000542133	PRM1	P04553	51 aa		2.01	□□□□□ -2.09
NPIPB4-215	ENST00000542133	MUC19	Q7Z5P9	8384 aa		1.89	□□□□□ -2.11
NPIPB4-215	ENST00000542133	PHGR1	C9JFL3	82 aa		1.84	□□□□□ -2.11
NPIPB4-215	ENST00000542133	KRTAP21-2	Q3LI59	83 aa		1.61	□□□□□ -2.15
NPIPB4-215	ENST00000542133	KRTAP21-1	Q3LI58	79 aa		1.54	□□□□□ -2.16
NPIPB4-215	ENST00000542133	MUC16	Q8WXI7	14507 aa		1.05	□□□□□ -2.24

Retrieved 78 of 20,778 RNA–protein pairs in 148.8 ms