RNA–Protein interactions for RNA: ENST00000535643.5

LINC01089-204, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 1 (best)

Gene LINC01089, Length 1,014 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-204ENST00000535643 KRTAP15-1Q3LI76 137 aa5.74□□□□□ -1.49
LINC01089-204ENST00000535643 KRTAP10-10P60014 251 aa5.72□□□□□ -1.49
LINC01089-204ENST00000535643 DSTQ03001 7570 aaKnown RBP5.71□□□□□ -1.49
LINC01089-204ENST00000535643 KRTAP12-2P59991 146 aa5.71□□□□□ -1.5
LINC01089-204ENST00000535643 SPRR2EP22531 72 aa5.69□□□□□ -1.5
LINC01089-204ENST00000535643 SPRR2BP35325 72 aa5.69□□□□□ -1.5
LINC01089-204ENST00000535643 SPRR2AP35326 72 aa5.69□□□□□ -1.5
LINC01089-204ENST00000535643 C10orf95Q9H7T3 257 aa5.65□□□□□ -1.5
LINC01089-204ENST00000535643 HMCN1Q96RW7 5635 aa5.61□□□□□ -1.51
LINC01089-204ENST00000535643 NDUFAF8A1L188 74 aa5.55□□□□□ -1.52
LINC01089-204ENST00000535643 KRTAP5-10Q6L8G5 202 aa5.52□□□□□ -1.53
LINC01089-204ENST00000535643 SPRR5A0A1B0GTR4 108 aa5.51□□□□□ -1.53
LINC01089-204ENST00000535643 SPRR2DP22532 72 aa5.51□□□□□ -1.53
LINC01089-204ENST00000535643 R4GN34 69 aa5.48□□□□□ -1.53
LINC01089-204ENST00000535643 KRTAP5-7Q6L8G8 165 aa5.47□□□□□ -1.53
LINC01089-204ENST00000535643 PP632Q6XCG6 107 aa5.47□□□□□ -1.53
LINC01089-204ENST00000535643 LCE1AQ5T7P2 110 aa5.45□□□□□ -1.54
LINC01089-204ENST00000535643 SPRR2FQ96RM1 72 aa5.45□□□□□ -1.54
LINC01089-204ENST00000535643 PLAC4Q8WY50 150 aa5.39□□□□□ -1.55
LINC01089-204ENST00000535643 KRTAP23-1A1A580 65 aa5.32□□□□□ -1.56
LINC01089-204ENST00000535643 AHNAKQ09666 5890 aaKnown RBP5.26□□□□□ -1.57
LINC01089-204ENST00000535643 LUZP6Q538Z0 58 aa5.25□□□□□ -1.57
LINC01089-204ENST00000535643 CAMK2N1Q7Z7J9 78 aa5.22□□□□□ -1.57
LINC01089-204ENST00000535643 A0A0A0MQY5 61 aa5.17□□□□□ -1.58
LINC01089-204ENST00000535643 TNP1P09430 55 aa5.14□□□□□ -1.59
LINC01089-204ENST00000535643 KRTAP10-5P60370 271 aa5.13□□□□□ -1.59
LINC01089-204ENST00000535643 MUC5BQ9HC84 5762 aaPredicted RBP4.99□□□□□ -1.61
LINC01089-204ENST00000535643 MT1BP07438 61 aa4.99□□□□□ -1.61
LINC01089-204ENST00000535643 MT4P47944 62 aa4.97□□□□□ -1.61
LINC01089-204ENST00000535643 KRTAP8-1Q8IUC2 63 aa4.97□□□□□ -1.61
LINC01089-204ENST00000535643 MUC5ACP98088 5654 aa4.93□□□□□ -1.62
LINC01089-204ENST00000535643 SPRR2GQ9BYE4 73 aa4.92□□□□□ -1.62
LINC01089-204ENST00000535643 INE1O15225 51 aa4.73□□□□□ -1.65
LINC01089-204ENST00000535643 KRTAP19-8Q3LI54 63 aa4.72□□□□□ -1.65
LINC01089-204ENST00000535643 LCE3AQ5TA76 89 aa4.72□□□□□ -1.65
LINC01089-204ENST00000535643 PRO2289Q9P1D8 64 aa4.72□□□□□ -1.65
LINC01089-204ENST00000535643 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.64□□□□□ -1.67
LINC01089-204ENST00000535643 KRTAP12-3P60328 96 aa4.55□□□□□ -1.68
LINC01089-204ENST00000535643 KRTAP10-12P60413 245 aa4.54□□□□□ -1.68
LINC01089-204ENST00000535643 MT1XP80297 61 aa4.52□□□□□ -1.69
LINC01089-204ENST00000535643 KRTAP10-7P60409 375 aaPredicted RBP4.51□□□□□ -1.69
LINC01089-204ENST00000535643 KRTAP5-11Q6L8G4 156 aa4.51□□□□□ -1.69
LINC01089-204ENST00000535643 KRTAP5-4Q6L8H1 288 aa4.45□□□□□ -1.7
LINC01089-204ENST00000535643 KRTAP5-8O75690 187 aa4.32□□□□□ -1.72
LINC01089-204ENST00000535643 KRTAP20-2Q3LI61 65 aa4.31□□□□□ -1.72
LINC01089-204ENST00000535643 LCE3CQ5T5A8 94 aa4.3□□□□□ -1.72
LINC01089-204ENST00000535643 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
LINC01089-204ENST00000535643 KRTAP19-5Q3LI72 72 aa4.22□□□□□ -1.73
LINC01089-204ENST00000535643 KRTAP19-3Q7Z4W3 81 aa4.17□□□□□ -1.74
LINC01089-204ENST00000535643 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
LINC01089-204ENST00000535643 KRTAP9-6A8MVA2 160 aa4.03□□□□□ -1.76
LINC01089-204ENST00000535643 KRTAP19-7Q3SYF9 63 aa4.02□□□□□ -1.77
LINC01089-204ENST00000535643 KRTAP5-2Q701N4 177 aa4.01□□□□□ -1.77
LINC01089-204ENST00000535643 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
LINC01089-204ENST00000535643 MT1LQ93083 61 aa3.96□□□□□ -1.78
LINC01089-204ENST00000535643 MT1EP04732 61 aa3.94□□□□□ -1.78
LINC01089-204ENST00000535643 OBSCNQ5VST9 7968 aa3.92□□□□□ -1.78
LINC01089-204ENST00000535643 MT1GP13640 62 aa3.89□□□□□ -1.79
LINC01089-204ENST00000535643 MT3P25713 68 aa3.89□□□□□ -1.79
LINC01089-204ENST00000535643 KRTAP12-4P60329 112 aa3.86□□□□□ -1.79
LINC01089-204ENST00000535643 KRTAP4-3Q9BYR4 195 aa3.85□□□□□ -1.79
LINC01089-204ENST00000535643 MT1MQ8N339 61 aa3.84□□□□□ -1.79
LINC01089-204ENST00000535643 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
LINC01089-204ENST00000535643 KRTAP5-5Q701N2 237 aaPredicted RBP3.66□□□□□ -1.82
LINC01089-204ENST00000535643 MT1AP04731 61 aa3.55□□□□□ -1.84
LINC01089-204ENST00000535643 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
LINC01089-204ENST00000535643 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
LINC01089-204ENST00000535643 LCE3DQ9BYE3 92 aa3.34□□□□□ -1.87
LINC01089-204ENST00000535643 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
LINC01089-204ENST00000535643 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
LINC01089-204ENST00000535643 PRM1P04553 51 aa3.18□□□□□ -1.9
LINC01089-204ENST00000535643 KRTAP6-2Q3LI66 62 aa3.18□□□□□ -1.9
LINC01089-204ENST00000535643 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
LINC01089-204ENST00000535643 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
LINC01089-204ENST00000535643 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
LINC01089-204ENST00000535643 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
LINC01089-204ENST00000535643 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
LINC01089-204ENST00000535643 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms