RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 ATOX1O00244 68 aa-0.01□□□□□ -2.41
CD44-234ENST00000531873 IGLC2P0DOY2 106 aa-0.01□□□□□ -2.41
CD44-234ENST00000531873 FCER1GP30273 86 aa-0.01□□□□□ -2.41
CD44-234ENST00000531873 PMCHL1Q16048 86 aa-0.01□□□□□ -2.41
CD44-234ENST00000531873 SERP2Q8N6R1 65 aa-0.01□□□□□ -2.41
CD44-234ENST00000531873 I3L3M4 83 aa-0.02□□□□□ -2.41
CD44-234ENST00000531873 M0QY20 66 aa-0.02□□□□□ -2.41
CD44-234ENST00000531873 VAMP8Q9BV40 100 aa-0.02□□□□□ -2.41
CD44-234ENST00000531873 KCNQ1DNQ9H478 68 aa-0.02□□□□□ -2.41
CD44-234ENST00000531873 PRM1P04553 51 aa-0.03□□□□□ -2.41
CD44-234ENST00000531873 GNG2P59768 71 aa-0.03□□□□□ -2.41
CD44-234ENST00000531873 SNHG12Q9BXW3 62 aa-0.03□□□□□ -2.41
CD44-234ENST00000531873 IGLV5-48A0A075B6I7 105 aa-0.04□□□□□ -2.42
CD44-234ENST00000531873 LINC00158P58513 81 aa-0.04□□□□□ -2.42
CD44-234ENST00000531873 MUSTN1Q8IVN3 82 aa-0.04□□□□□ -2.42
CD44-234ENST00000531873 DEFB107AQ8IZN7 70 aa-0.04□□□□□ -2.42
CD44-234ENST00000531873 A0A1B0GU69 56 aa-0.05□□□□□ -2.42
CD44-234ENST00000531873 SYS1-DBNDD2H3BUS1 97 aa-0.05□□□□□ -2.42
CD44-234ENST00000531873 S100A8P05109 93 aa-0.05□□□□□ -2.42
CD44-234ENST00000531873 TNP1P09430 55 aa-0.05□□□□□ -2.42
CD44-234ENST00000531873 FAUP35544 74 aaKnown RBP-0.05□□□□□ -2.42
CD44-234ENST00000531873 CRIP1P50238 77 aa-0.05□□□□□ -2.42
CD44-234ENST00000531873 COL5A1-AS1Q5SY13 56 aa-0.05□□□□□ -2.42
CD44-234ENST00000531873 ST20Q9HBF5 79 aa-0.05□□□□□ -2.42
CD44-234ENST00000531873 H0Y9P7 68 aa-0.06□□□□□ -2.42
CD44-234ENST00000531873 NDUFB1O75438 58 aa-0.06□□□□□ -2.42
CD44-234ENST00000531873 IFI27P40305 119 aaPredicted RBP-0.06□□□□□ -2.42
CD44-234ENST00000531873 A0A087WXM4 84 aa-0.07□□□□□ -2.42
CD44-234ENST00000531873 POLR2KP53803 58 aaKnown RBP-0.07□□□□□ -2.42
CD44-234ENST00000531873 PSENENQ9NZ42 101 aa-0.07□□□□□ -2.42
CD44-234ENST00000531873 COX7BP24311 80 aa-0.08□□□□□ -2.42
CD44-234ENST00000531873 RPL39LQ96EH5 51 aaKnown RBP-0.08□□□□□ -2.42
CD44-234ENST00000531873 MMP24-AS1A0A0U1RRL7 71 aa-0.09□□□□□ -2.42
CD44-234ENST00000531873 HIGD1BQ9P298 99 aa-0.09□□□□□ -2.42
CD44-234ENST00000531873 CDKN2A-AS1Q9UH64 79 aa-0.09□□□□□ -2.42
CD44-234ENST00000531873 ACYP1P07311 99 aa-0.1□□□□□ -2.43
CD44-234ENST00000531873 RPL39P62891 51 aaKnown RBP-0.1□□□□□ -2.43
CD44-234ENST00000531873 GNGT1P63211 74 aa-0.1□□□□□ -2.43
CD44-234ENST00000531873 FXYD6Q9H0Q3 95 aa-0.1□□□□□ -2.43
CD44-234ENST00000531873 H3BUT2 72 aa-0.11□□□□□ -2.43
CD44-234ENST00000531873 ETDBQ3ZM63 59 aa-0.11□□□□□ -2.43
CD44-234ENST00000531873 SMIM13P0DJ93 91 aa-0.12□□□□□ -2.43
CD44-234ENST00000531873 COX8AP10176 69 aa-0.12□□□□□ -2.43
CD44-234ENST00000531873 MRPL34Q9BQ48 92 aaKnown RBP-0.12□□□□□ -2.43
CD44-234ENST00000531873 C20orf78Q9BR46 151 aa-0.12□□□□□ -2.43
CD44-234ENST00000531873 LEPROTL1O95214 131 aa-0.13□□□□□ -2.43
CD44-234ENST00000531873 SMIM31A0A1B0GVY4 71 aa-0.14□□□□□ -2.43
CD44-234ENST00000531873 C9orf62Q8N4C0 152 aa-0.14□□□□□ -2.43
CD44-234ENST00000531873 S100A16Q96FQ6 103 aaKnown RBP-0.14□□□□□ -2.43
CD44-234ENST00000531873 TMEM167BQ9NRX6 74 aa-0.14□□□□□ -2.43
CD44-234ENST00000531873 SMIM27A0A1W2PRY6 76 aa-0.15□□□□□ -2.43
CD44-234ENST00000531873 IGLC3P0DOY3 106 aa-0.15□□□□□ -2.43
CD44-234ENST00000531873 MYMXA0A1B0GTQ4 84 aa-0.16□□□□□ -2.44
CD44-234ENST00000531873 S100ZQ8WXG8 99 aa-0.17□□□□□ -2.44
CD44-234ENST00000531873 A0A1B0GUT8 65 aa-0.18□□□□□ -2.44
CD44-234ENST00000531873 IGIPA6NJ69 53 aa-0.18□□□□□ -2.44
CD44-234ENST00000531873 BVES-AS1Q5T3Y7 98 aa-0.18□□□□□ -2.44
CD44-234ENST00000531873 LINC01549A6NIU2 74 aa-0.19□□□□□ -2.44
CD44-234ENST00000531873 K7EMI3 77 aa-0.2□□□□□ -2.44
CD44-234ENST00000531873 PYY3Q5JQD4 70 aa-0.2□□□□□ -2.44
CD44-234ENST00000531873 Q9H521 79 aa-0.21□□□□□ -2.44
CD44-234ENST00000531873 PEA15Q15121 130 aa-0.22□□□□□ -2.44
CD44-234ENST00000531873 NREPQ16612 68 aa-0.22□□□□□ -2.44
CD44-234ENST00000531873 LINC00308Q8TCZ7 52 aa-0.22□□□□□ -2.44
CD44-234ENST00000531873 SERF2P84101 59 aa-0.23□□□□□ -2.45
CD44-234ENST00000531873 SMCO4Q9NRQ5 59 aa-0.24□□□□□ -2.45
CD44-234ENST00000531873 PLNP26678 52 aa-0.25□□□□□ -2.45
CD44-234ENST00000531873 H0YGX0 51 aa-0.26□□□□□ -2.45
CD44-234ENST00000531873 TOMM5Q8N4H5 51 aa-0.26□□□□□ -2.45
CD44-234ENST00000531873 GNG13Q9P2W3 67 aa-0.26□□□□□ -2.45
CD44-234ENST00000531873 LINC00643Q86TS7 51 aa-0.3□□□□□ -2.46
CD44-234ENST00000531873 UMAD1C9J7I0 102 aa-0.31□□□□□ -2.46
CD44-234ENST00000531873 ADIRFQ15847 76 aa-0.33□□□□□ -2.46
CD44-234ENST00000531873 UBL5Q9BZL1 73 aa-0.36□□□□□ -2.47
CD44-234ENST00000531873 KANTRA0A1W2PQU2 76 aa-0.38□□□□□ -2.47
CD44-234ENST00000531873 ATXN8Q156A1 80 aa-0.4□□□□□ -2.47
CD44-234ENST00000531873 C18orf32Q8TCD1 76 aa-0.4□□□□□ -2.47
CD44-234ENST00000531873 ATP5EP2Q5VTU8 51 aa-0.5□□□□□ -2.49
Retrieved 78 of 20,778 RNA–protein pairs in 117.7 ms