RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 C5orf42Q9H799 3197 aa-0.16□□□□□ -2.44
USP47-211ENST00000531513 UTRNP46939 3433 aa-0.16□□□□□ -2.44
USP47-211ENST00000531513 DMXL2Q8TDJ6 3036 aa-0.17□□□□□ -2.44
USP47-211ENST00000531513 WDFY3Q8IZQ1 3526 aa-0.17□□□□□ -2.44
USP47-211ENST00000531513 DNAH5Q8TE73 4624 aa-0.17□□□□□ -2.44
USP47-211ENST00000531513 CFAP54Q96N23 3096 aa-0.17□□□□□ -2.44
USP47-211ENST00000531513 TRRAPQ9Y4A5 3859 aa-0.17□□□□□ -2.44
USP47-211ENST00000531513 CHD7Q9P2D1 2997 aa-0.18□□□□□ -2.44
USP47-211ENST00000531513 FREM2Q5SZK8 3169 aa-0.18□□□□□ -2.44
USP47-211ENST00000531513 CFAP47Q6ZTR5 3102 aa-0.18□□□□□ -2.44
USP47-211ENST00000531513 ASPMQ8IZT6 3477 aa-0.18□□□□□ -2.44
USP47-211ENST00000531513 MGAQ8IWI9 3026 aa-0.18□□□□□ -2.44
USP47-211ENST00000531513 SMG1Q96Q15 3661 aaKnown RBP-0.19□□□□□ -2.44
USP47-211ENST00000531513 MUC17Q685J3 4493 aa-0.19□□□□□ -2.44
USP47-211ENST00000531513 MT1HL1P0DM35 61 aa-0.19□□□□□ -2.44
USP47-211ENST00000531513 CMYA5Q8N3K9 4069 aa-0.19□□□□□ -2.44
USP47-211ENST00000531513 XIRP2A4UGR9 3374 aa-0.2□□□□□ -2.44
USP47-211ENST00000531513 DNAH14Q0VDD8 3507 aa-0.2□□□□□ -2.44
USP47-211ENST00000531513 CDH23Q9H251 3354 aa-0.2□□□□□ -2.44
USP47-211ENST00000531513 CEP350Q5VT06 3117 aa-0.2□□□□□ -2.44
USP47-211ENST00000531513 CENPFP49454 3210 aa-0.21□□□□□ -2.44
USP47-211ENST00000531513 CRYBG3Q68DQ2 2970 aa-0.21□□□□□ -2.44
USP47-211ENST00000531513 SPTBN5Q9NRC6 3674 aaKnown RBP-0.21□□□□□ -2.44
USP47-211ENST00000531513 RPL39P62891 51 aaKnown RBP-0.21□□□□□ -2.44
USP47-211ENST00000531513 TOMM7Q9P0U1 55 aa-0.21□□□□□ -2.44
USP47-211ENST00000531513 CENPEQ02224 2701 aa-0.22□□□□□ -2.44
USP47-211ENST00000531513 SNRPGP62308 76 aaKnown RBP-0.22□□□□□ -2.44
USP47-211ENST00000531513 ATMQ13315 3056 aa-0.23□□□□□ -2.45
USP47-211ENST00000531513 DNAH12Q6ZR08 3092 aa-0.23□□□□□ -2.45
USP47-211ENST00000531513 PRUNE2Q8WUY3 3088 aa-0.23□□□□□ -2.45
USP47-211ENST00000531513 MROH2BQ7Z745 1585 aa-0.23□□□□□ -2.45
USP47-211ENST00000531513 LEAP2Q969E1 77 aa-0.24□□□□□ -2.45
USP47-211ENST00000531513 MT1BP07438 61 aa-0.25□□□□□ -2.45
USP47-211ENST00000531513 MT1XP80297 61 aa-0.25□□□□□ -2.45
USP47-211ENST00000531513 DMDP11532 3685 aa-0.26□□□□□ -2.45
USP47-211ENST00000531513 LINC01590Q5TEZ4 76 aa-0.26□□□□□ -2.45
USP47-211ENST00000531513 VPS13AQ96RL7 3174 aa-0.26□□□□□ -2.45
USP47-211ENST00000531513 DNAH10Q8IVF4 4471 aa-0.26□□□□□ -2.45
USP47-211ENST00000531513 MT1EP04732 61 aa-0.27□□□□□ -2.45
USP47-211ENST00000531513 MT1MQ8N339 61 aa-0.27□□□□□ -2.45
USP47-211ENST00000531513 DNAH17Q9UFH2 4485 aa-0.27□□□□□ -2.45
USP47-211ENST00000531513 DUOX1Q9NRD9 1551 aa-0.28□□□□□ -2.45
USP47-211ENST00000531513 MT2AP02795 61 aa-0.28□□□□□ -2.45
USP47-211ENST00000531513 MT1LQ93083 61 aa-0.28□□□□□ -2.45
USP47-211ENST00000531513 RPL39LQ96EH5 51 aaKnown RBP-0.28□□□□□ -2.45
USP47-211ENST00000531513 FRYLO94915 3013 aa-0.28□□□□□ -2.45
USP47-211ENST00000531513 GOLGB1Q14789 3259 aaKnown RBP-0.29□□□□□ -2.46
USP47-211ENST00000531513 MT1GP13640 62 aa-0.3□□□□□ -2.46
USP47-211ENST00000531513 RPS29P62273 56 aaKnown RBP-0.3□□□□□ -2.46
USP47-211ENST00000531513 MT1FP04733 61 aa-0.31□□□□□ -2.46
USP47-211ENST00000531513 DEFB136Q30KP8 78 aa-0.32□□□□□ -2.46
USP47-211ENST00000531513 DEFB104AQ8WTQ1 72 aa-0.34□□□□□ -2.46
USP47-211ENST00000531513 GCC2Q8IWJ2 1684 aa-0.36□□□□□ -2.47
USP47-211ENST00000531513 KRTAP19-2Q3LHN2 52 aa-0.36□□□□□ -2.47
USP47-211ENST00000531513 DEFB4AO15263 64 aa-0.37□□□□□ -2.47
USP47-211ENST00000531513 CD52P31358 61 aa-0.41□□□□□ -2.48
USP47-211ENST00000531513 RHPN1-AS1Q9BWJ2 59 aa-0.41□□□□□ -2.48
USP47-211ENST00000531513 TTTY10Q9BZA0 68 aa-0.42□□□□□ -2.48
USP47-211ENST00000531513 DEFB133Q30KQ1 61 aa-0.48□□□□□ -2.49
USP47-211ENST00000531513 ARHGAP5-AS1Q96IT6 56 aa-0.5□□□□□ -2.49
USP47-211ENST00000531513 DEFB124Q8NES8 71 aa-0.52□□□□□ -2.49
USP47-211ENST00000531513 HTN1P15515 57 aa-0.53□□□□□ -2.49
USP47-211ENST00000531513 H3BUX3 64 aa-0.54□□□□□ -2.5
USP47-211ENST00000531513 K7EIM0 57 aa-0.54□□□□□ -2.5
USP47-211ENST00000531513 PRCDQ00LT1 54 aa-0.56□□□□□ -2.5
USP47-211ENST00000531513 Q9Y3F1 56 aa-0.57□□□□□ -2.5
USP47-211ENST00000531513 A0A096LNI7 61 aa-0.59□□□□□ -2.5
USP47-211ENST00000531513 STATHP02808 62 aa-0.59□□□□□ -2.5
USP47-211ENST00000531513 LINC01556Q5JQF7 62 aa-0.59□□□□□ -2.5
USP47-211ENST00000531513 H3BSH0 61 aa-0.61□□□□□ -2.51
USP47-211ENST00000531513 HTN3P15516 51 aa-0.63□□□□□ -2.51
USP47-211ENST00000531513 COX14Q96I36 57 aa-0.67□□□□□ -2.52
USP47-211ENST00000531513 A0A096LPF7 62 aa-0.68□□□□□ -2.52
USP47-211ENST00000531513 DEFB108AA8MXU0 73 aa-0.68□□□□□ -2.52
USP47-211ENST00000531513 APELAP0DMC3 54 aa-0.68□□□□□ -2.52
USP47-211ENST00000531513 TMEM167AQ8TBQ9 72 aa-0.68□□□□□ -2.52
USP47-211ENST00000531513 DEFB108BQ8NET1 73 aa-0.7□□□□□ -2.52
USP47-211ENST00000531513 RPL39P5Q59GN2 51 aa-0.82□□□□□ -2.54
Retrieved 78 of 20,778 RNA–protein pairs in 141.7 ms