RNA–Protein interactions for RNA: ENST00000530809.2

VPS11-204, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-204ENST00000530809 NEBP20929 6669 aa2.42□□□□□ -2.02
VPS11-204ENST00000530809 MT1BP07438 61 aa2.41□□□□□ -2.02
VPS11-204ENST00000530809 KRTAP2-2Q9BYT5 123 aa2.4□□□□□ -2.03
VPS11-204ENST00000530809 KRTAP2-1Q9BYU5 128 aa2.4□□□□□ -2.03
VPS11-204ENST00000530809 KRTAP19-8Q3LI54 63 aa2.39□□□□□ -2.03
VPS11-204ENST00000530809 SPRR2EP22531 72 aa2.38□□□□□ -2.03
VPS11-204ENST00000530809 SPRR2BP35325 72 aa2.38□□□□□ -2.03
VPS11-204ENST00000530809 SPRR2AP35326 72 aa2.38□□□□□ -2.03
VPS11-204ENST00000530809 SPRR2GQ9BYE4 73 aa2.37□□□□□ -2.03
VPS11-204ENST00000530809 SPRR2FQ96RM1 72 aa2.36□□□□□ -2.03
VPS11-204ENST00000530809 KMT2DO14686 5537 aa2.34□□□□□ -2.03
VPS11-204ENST00000530809 PP632Q6XCG6 107 aa2.33□□□□□ -2.04
VPS11-204ENST00000530809 CAMK2N1Q7Z7J9 78 aa2.33□□□□□ -2.04
VPS11-204ENST00000530809 MT3P25713 68 aa2.32□□□□□ -2.04
VPS11-204ENST00000530809 SPRR2DP22532 72 aa2.31□□□□□ -2.04
VPS11-204ENST00000530809 MDN1Q9NU22 5596 aa2.31□□□□□ -2.04
VPS11-204ENST00000530809 NDUFAF8A1L188 74 aa2.29□□□□□ -2.04
VPS11-204ENST00000530809 KRTAP8-1Q8IUC2 63 aa2.29□□□□□ -2.04
VPS11-204ENST00000530809 PLAC4Q8WY50 150 aa2.29□□□□□ -2.04
VPS11-204ENST00000530809 C10orf95Q9H7T3 257 aa2.28□□□□□ -2.04
VPS11-204ENST00000530809 PRO2289Q9P1D8 64 aa2.28□□□□□ -2.04
VPS11-204ENST00000530809 TNP1P09430 55 aa2.26□□□□□ -2.05
VPS11-204ENST00000530809 MT1XP80297 61 aa2.2□□□□□ -2.06
VPS11-204ENST00000530809 KRTAP5-3Q6L8H2 238 aa2.2□□□□□ -2.06
VPS11-204ENST00000530809 KRTAP10-12P60413 245 aa2.11□□□□□ -2.07
VPS11-204ENST00000530809 KRTAP10-7P60409 375 aaPredicted RBP2.09□□□□□ -2.07
VPS11-204ENST00000530809 LUZP6Q538Z0 58 aa2.08□□□□□ -2.08
VPS11-204ENST00000530809 LCE3AQ5TA76 89 aa2.07□□□□□ -2.08
VPS11-204ENST00000530809 SPRR5A0A1B0GTR4 108 aa2.06□□□□□ -2.08
VPS11-204ENST00000530809 LCE1FQ5T754 118 aa2.06□□□□□ -2.08
VPS11-204ENST00000530809 KRTAP5-10Q6L8G5 202 aa2.05□□□□□ -2.08
VPS11-204ENST00000530809 GPR98Q8WXG9 6306 aa2.04□□□□□ -2.08
VPS11-204ENST00000530809 DSTQ03001 7570 aaKnown RBP2.03□□□□□ -2.08
VPS11-204ENST00000530809 MT4P47944 62 aa2.02□□□□□ -2.09
VPS11-204ENST00000530809 KRTAP12-3P60328 96 aa2.02□□□□□ -2.09
VPS11-204ENST00000530809 KRTAP19-3Q7Z4W3 81 aa2.02□□□□□ -2.09
VPS11-204ENST00000530809 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
VPS11-204ENST00000530809 MT1EP04732 61 aa1.97□□□□□ -2.09
VPS11-204ENST00000530809 KRTAP19-7Q3SYF9 63 aa1.97□□□□□ -2.09
VPS11-204ENST00000530809 MT1GP13640 62 aa1.96□□□□□ -2.1
VPS11-204ENST00000530809 KRTAP5-4Q6L8H1 288 aa1.95□□□□□ -2.1
VPS11-204ENST00000530809 HMCN1Q96RW7 5635 aa1.93□□□□□ -2.1
VPS11-204ENST00000530809 KRTAP19-5Q3LI72 72 aa1.93□□□□□ -2.1
VPS11-204ENST00000530809 LCE3CQ5T5A8 94 aa1.93□□□□□ -2.1
VPS11-204ENST00000530809 LCE1EQ5T753 118 aa1.92□□□□□ -2.1
VPS11-204ENST00000530809 AHNAK2Q8IVF2 5795 aa1.9□□□□□ -2.11
VPS11-204ENST00000530809 MT1MQ8N339 61 aa1.89□□□□□ -2.11
VPS11-204ENST00000530809 KRTAP20-2Q3LI61 65 aa1.85□□□□□ -2.11
VPS11-204ENST00000530809 MT1LQ93083 61 aa1.85□□□□□ -2.11
VPS11-204ENST00000530809 KRTAP4-3Q9BYR4 195 aa1.81□□□□□ -2.12
VPS11-204ENST00000530809 KRTAP12-4P60329 112 aa1.8□□□□□ -2.12
VPS11-204ENST00000530809 INE1O15225 51 aa1.78□□□□□ -2.12
VPS11-204ENST00000530809 KRTAP5-11Q6L8G4 156 aa1.78□□□□□ -2.12
VPS11-204ENST00000530809 KRTAP9-6A8MVA2 160 aa1.76□□□□□ -2.13
VPS11-204ENST00000530809 LCE3EQ5T5B0 92 aa1.76□□□□□ -2.13
VPS11-204ENST00000530809 KRTAP5-5Q701N2 237 aaPredicted RBP1.76□□□□□ -2.13
VPS11-204ENST00000530809 KRTAP5-8O75690 187 aa1.69□□□□□ -2.14
VPS11-204ENST00000530809 KRTAP5-2Q701N4 177 aa1.67□□□□□ -2.14
VPS11-204ENST00000530809 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.65□□□□□ -2.15
VPS11-204ENST00000530809 MUC5ACP98088 5654 aa1.65□□□□□ -2.15
VPS11-204ENST00000530809 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
VPS11-204ENST00000530809 MT1AP04731 61 aa1.59□□□□□ -2.15
VPS11-204ENST00000530809 MUC5BQ9HC84 5762 aaPredicted RBP1.59□□□□□ -2.15
VPS11-204ENST00000530809 SYNE1Q8NF91 8797 aaKnown RBP1.58□□□□□ -2.16
VPS11-204ENST00000530809 KRTAP6-1Q3LI64 71 aa1.56□□□□□ -2.16
VPS11-204ENST00000530809 KRTAP6-2Q3LI66 62 aa1.54□□□□□ -2.16
VPS11-204ENST00000530809 KRTAP5-1Q6L8H4 278 aa1.53□□□□□ -2.16
VPS11-204ENST00000530809 OBSCNQ5VST9 7968 aa1.52□□□□□ -2.17
VPS11-204ENST00000530809 LCE3DQ9BYE3 92 aa1.49□□□□□ -2.17
VPS11-204ENST00000530809 KRTAP4-4Q9BYR3 166 aa1.37□□□□□ -2.19
VPS11-204ENST00000530809 LCE1CQ5T751 118 aa1.31□□□□□ -2.2
VPS11-204ENST00000530809 LCE1BQ5T7P3 118 aa1.31□□□□□ -2.2
VPS11-204ENST00000530809 PRM1P04553 51 aa1.27□□□□□ -2.21
VPS11-204ENST00000530809 PHGR1C9JFL3 82 aa1.21□□□□□ -2.22
VPS11-204ENST00000530809 KRTAP21-2Q3LI59 83 aa1.03□□□□□ -2.24
VPS11-204ENST00000530809 MUC19Q7Z5P9 8384 aa1.03□□□□□ -2.25
VPS11-204ENST00000530809 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
VPS11-204ENST00000530809 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 68.3 ms