RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 LEAP2Q969E1 77 aa0.03□□□□□ -2.4
CAPRIN1-208ENST00000530008 MKI67P46013 3256 aaKnown RBP0.02□□□□□ -2.41
CAPRIN1-208ENST00000530008 DCHS1Q96JQ0 3298 aa0.02□□□□□ -2.41
CAPRIN1-208ENST00000530008 RELNP78509 3460 aa0.01□□□□□ -2.41
CAPRIN1-208ENST00000530008 SPEGQ15772 3267 aa0.01□□□□□ -2.41
CAPRIN1-208ENST00000530008 CENPFP49454 3210 aa0□□□□□ -2.41
CAPRIN1-208ENST00000530008 GOLGB1Q14789 3259 aaKnown RBP0□□□□□ -2.41
CAPRIN1-208ENST00000530008 DYNC1H1Q14204 4646 aaKnown RBP0□□□□□ -2.41
CAPRIN1-208ENST00000530008 DNAH5Q8TE73 4624 aa-0.01□□□□□ -2.41
CAPRIN1-208ENST00000530008 UNC80Q8N2C7 3258 aa-0.01□□□□□ -2.41
CAPRIN1-208ENST00000530008 SPART-AS1P0CW21 52 aa-0.01□□□□□ -2.41
CAPRIN1-208ENST00000530008 TOMM7Q9P0U1 55 aa-0.01□□□□□ -2.41
CAPRIN1-208ENST00000530008 DNAH17Q9UFH2 4485 aa-0.01□□□□□ -2.41
CAPRIN1-208ENST00000530008 KRTAP6-1Q3LI64 71 aa-0.02□□□□□ -2.41
CAPRIN1-208ENST00000530008 MUC17Q685J3 4493 aa-0.03□□□□□ -2.41
CAPRIN1-208ENST00000530008 KRTAP19-7Q3SYF9 63 aa-0.03□□□□□ -2.41
CAPRIN1-208ENST00000530008 DMDP11532 3685 aa-0.03□□□□□ -2.41
CAPRIN1-208ENST00000530008 USP34Q70CQ2 3546 aa-0.04□□□□□ -2.42
CAPRIN1-208ENST00000530008 VCANP13611 3396 aa-0.04□□□□□ -2.42
CAPRIN1-208ENST00000530008 SMG1Q96Q15 3661 aaKnown RBP-0.04□□□□□ -2.42
CAPRIN1-208ENST00000530008 CSMD1Q96PZ7 3565 aa-0.04□□□□□ -2.42
CAPRIN1-208ENST00000530008 DEFB104AQ8WTQ1 72 aa-0.04□□□□□ -2.42
CAPRIN1-208ENST00000530008 BRCA2P51587 3418 aa-0.05□□□□□ -2.42
CAPRIN1-208ENST00000530008 XIRP2A4UGR9 3374 aa-0.05□□□□□ -2.42
CAPRIN1-208ENST00000530008 MYO15AQ9UKN7 3530 aa-0.05□□□□□ -2.42
CAPRIN1-208ENST00000530008 DNAH14Q0VDD8 3507 aa-0.06□□□□□ -2.42
CAPRIN1-208ENST00000530008 SZT2Q5T011 3432 aa-0.06□□□□□ -2.42
CAPRIN1-208ENST00000530008 CSMD2Q7Z408 3487 aa-0.06□□□□□ -2.42
CAPRIN1-208ENST00000530008 CDH23Q9H251 3354 aa-0.06□□□□□ -2.42
CAPRIN1-208ENST00000530008 PCNTO95613 3336 aa-0.07□□□□□ -2.42
CAPRIN1-208ENST00000530008 DEFB1P60022 68 aa-0.07□□□□□ -2.42
CAPRIN1-208ENST00000530008 ARHGAP5-AS1Q96IT6 56 aa-0.08□□□□□ -2.42
CAPRIN1-208ENST00000530008 MT4P47944 62 aa-0.09□□□□□ -2.42
CAPRIN1-208ENST00000530008 KRTAP19-8Q3LI54 63 aa-0.09□□□□□ -2.42
CAPRIN1-208ENST00000530008 WDFY3Q8IZQ1 3526 aa-0.1□□□□□ -2.43
CAPRIN1-208ENST00000530008 MUC3AQ02505 3323 aa-0.1□□□□□ -2.43
CAPRIN1-208ENST00000530008 KRTAP20-2Q3LI61 65 aa-0.1□□□□□ -2.43
CAPRIN1-208ENST00000530008 VPS13CQ709C8 3753 aa-0.1□□□□□ -2.43
CAPRIN1-208ENST00000530008 MT1HP80294 61 aa-0.11□□□□□ -2.43
CAPRIN1-208ENST00000530008 KRTAP19-6Q3LI70 58 aa-0.13□□□□□ -2.43
CAPRIN1-208ENST00000530008 LINC01590Q5TEZ4 76 aa-0.13□□□□□ -2.43
CAPRIN1-208ENST00000530008 TTTY10Q9BZA0 68 aa-0.13□□□□□ -2.43
CAPRIN1-208ENST00000530008 ASPMQ8IZT6 3477 aa-0.13□□□□□ -2.43
CAPRIN1-208ENST00000530008 MT1EP04732 61 aa-0.15□□□□□ -2.43
CAPRIN1-208ENST00000530008 UTRNP46939 3433 aa-0.16□□□□□ -2.43
CAPRIN1-208ENST00000530008 MT1HL1P0DM35 61 aa-0.16□□□□□ -2.44
CAPRIN1-208ENST00000530008 H3BSH0 61 aa-0.17□□□□□ -2.44
CAPRIN1-208ENST00000530008 MT1XP80297 61 aa-0.18□□□□□ -2.44
CAPRIN1-208ENST00000530008 MT1LQ93083 61 aa-0.18□□□□□ -2.44
CAPRIN1-208ENST00000530008 A0A096LNI7 61 aa-0.19□□□□□ -2.44
CAPRIN1-208ENST00000530008 MT1BP07438 61 aa-0.19□□□□□ -2.44
CAPRIN1-208ENST00000530008 PRCDQ00LT1 54 aa-0.19□□□□□ -2.44
CAPRIN1-208ENST00000530008 DEFB136Q30KP8 78 aa-0.2□□□□□ -2.44
CAPRIN1-208ENST00000530008 K7EIM0 57 aa-0.21□□□□□ -2.44
CAPRIN1-208ENST00000530008 DEFB4AO15263 64 aa-0.21□□□□□ -2.44
CAPRIN1-208ENST00000530008 MT1MQ8N339 61 aa-0.21□□□□□ -2.44
CAPRIN1-208ENST00000530008 MT2AP02795 61 aa-0.22□□□□□ -2.44
CAPRIN1-208ENST00000530008 MT1GP13640 62 aa-0.23□□□□□ -2.45
CAPRIN1-208ENST00000530008 RHPN1-AS1Q9BWJ2 59 aa-0.23□□□□□ -2.45
CAPRIN1-208ENST00000530008 MT1FP04733 61 aa-0.24□□□□□ -2.45
CAPRIN1-208ENST00000530008 RPS29P62273 56 aaKnown RBP-0.26□□□□□ -2.45
CAPRIN1-208ENST00000530008 HTN1P15515 57 aa-0.29□□□□□ -2.46
CAPRIN1-208ENST00000530008 KRTAP19-2Q3LHN2 52 aa-0.29□□□□□ -2.46
CAPRIN1-208ENST00000530008 TMEM167AQ8TBQ9 72 aa-0.29□□□□□ -2.46
CAPRIN1-208ENST00000530008 RPL39P5Q59GN2 51 aa-0.31□□□□□ -2.46
CAPRIN1-208ENST00000530008 DEFB124Q8NES8 71 aa-0.31□□□□□ -2.46
CAPRIN1-208ENST00000530008 DEFB133Q30KQ1 61 aa-0.32□□□□□ -2.46
CAPRIN1-208ENST00000530008 H3BUX3 64 aa-0.34□□□□□ -2.46
CAPRIN1-208ENST00000530008 DEFB108AA8MXU0 73 aa-0.35□□□□□ -2.47
CAPRIN1-208ENST00000530008 CD52P31358 61 aa-0.38□□□□□ -2.47
CAPRIN1-208ENST00000530008 APELAP0DMC3 54 aa-0.39□□□□□ -2.47
CAPRIN1-208ENST00000530008 A0A096LPF7 62 aa-0.45□□□□□ -2.48
CAPRIN1-208ENST00000530008 LINC01556Q5JQF7 62 aa-0.45□□□□□ -2.48
CAPRIN1-208ENST00000530008 Q9Y3F1 56 aa-0.5□□□□□ -2.49
CAPRIN1-208ENST00000530008 HTN3P15516 51 aa-0.53□□□□□ -2.49
CAPRIN1-208ENST00000530008 COX14Q96I36 57 aa-0.53□□□□□ -2.49
CAPRIN1-208ENST00000530008 STATHP02808 62 aa-0.59□□□□□ -2.5
CAPRIN1-208ENST00000530008 DEFB108BQ8NET1 73 aa-0.59□□□□□ -2.5
Retrieved 78 of 20,778 RNA–protein pairs in 7.5 ms