RNA–Protein interactions for RNA: ENST00000527792.5

LTBP3-209, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-209ENST00000527792 KRTAP10-7P60409 375 aaPredicted RBP6.14□□□□□ -1.43
LTBP3-209ENST00000527792 TNP1P09430 55 aa6.09□□□□□ -1.43
LTBP3-209ENST00000527792 KRTAP10-12P60413 245 aa6.07□□□□□ -1.44
LTBP3-209ENST00000527792 SPRR2EP22531 72 aa6.03□□□□□ -1.44
LTBP3-209ENST00000527792 SPRR2BP35325 72 aa6.03□□□□□ -1.44
LTBP3-209ENST00000527792 SPRR2AP35326 72 aa6.03□□□□□ -1.44
LTBP3-209ENST00000527792 SPRR2FQ96RM1 72 aa6.03□□□□□ -1.44
LTBP3-209ENST00000527792 ROMO1P60602 79 aa6.02□□□□□ -1.45
LTBP3-209ENST00000527792 KRTAP25-1Q3LHN0 102 aa5.97□□□□□ -1.45
LTBP3-209ENST00000527792 KRTAP2-2Q9BYT5 123 aa5.97□□□□□ -1.45
LTBP3-209ENST00000527792 KRTAP2-1Q9BYU5 128 aa5.97□□□□□ -1.45
LTBP3-209ENST00000527792 KRTAP8-1Q8IUC2 63 aa5.96□□□□□ -1.46
LTBP3-209ENST00000527792 LCE1AQ5T7P2 110 aa5.9□□□□□ -1.46
LTBP3-209ENST00000527792 PMAIP1Q13794 54 aa5.89□□□□□ -1.47
LTBP3-209ENST00000527792 PRO0628Q9UI54 55 aa5.88□□□□□ -1.47
LTBP3-209ENST00000527792 LCE3AQ5TA76 89 aa5.86□□□□□ -1.47
LTBP3-209ENST00000527792 SPRR2DP22532 72 aa5.83□□□□□ -1.48
LTBP3-209ENST00000527792 KRTAP19-5Q3LI72 72 aa5.74□□□□□ -1.49
LTBP3-209ENST00000527792 KRTAP23-1A1A580 65 aa5.73□□□□□ -1.49
LTBP3-209ENST00000527792 KRTAP19-7Q3SYF9 63 aa5.7□□□□□ -1.5
LTBP3-209ENST00000527792 PP632Q6XCG6 107 aa5.68□□□□□ -1.5
LTBP3-209ENST00000527792 MT1EP04732 61 aa5.64□□□□□ -1.51
LTBP3-209ENST00000527792 KRTAP12-3P60328 96 aa5.64□□□□□ -1.51
LTBP3-209ENST00000527792 KRTAP5-3Q6L8H2 238 aa5.62□□□□□ -1.51
LTBP3-209ENST00000527792 GPR98Q8WXG9 6306 aa5.57□□□□□ -1.52
LTBP3-209ENST00000527792 PRAC1Q96KF2 57 aa5.55□□□□□ -1.52
LTBP3-209ENST00000527792 KTN1-AS1Q86SY8 53 aa5.51□□□□□ -1.53
LTBP3-209ENST00000527792 KRTAP19-3Q7Z4W3 81 aa5.5□□□□□ -1.53
LTBP3-209ENST00000527792 DSTQ03001 7570 aaKnown RBP5.5□□□□□ -1.53
LTBP3-209ENST00000527792 MT1LQ93083 61 aa5.48□□□□□ -1.53
LTBP3-209ENST00000527792 KRTAP15-1Q3LI76 137 aa5.44□□□□□ -1.54
LTBP3-209ENST00000527792 MT1GP13640 62 aa5.42□□□□□ -1.54
LTBP3-209ENST00000527792 MT1MQ8N339 61 aa5.34□□□□□ -1.55
LTBP3-209ENST00000527792 SVIPQ8NHG7 77 aa5.29□□□□□ -1.56
LTBP3-209ENST00000527792 LCE3CQ5T5A8 94 aa5.24□□□□□ -1.57
LTBP3-209ENST00000527792 KRTAP4-3Q9BYR4 195 aa5.23□□□□□ -1.57
LTBP3-209ENST00000527792 MT4P47944 62 aa5.15□□□□□ -1.59
LTBP3-209ENST00000527792 HMCN1Q96RW7 5635 aa5.13□□□□□ -1.59
LTBP3-209ENST00000527792 AHNAK2Q8IVF2 5795 aa5.05□□□□□ -1.6
LTBP3-209ENST00000527792 KRTAP5-10Q6L8G5 202 aa5.04□□□□□ -1.6
LTBP3-209ENST00000527792 KRTAP5-4Q6L8H1 288 aa4.96□□□□□ -1.62
LTBP3-209ENST00000527792 KRTAP9-6A8MVA2 160 aa4.89□□□□□ -1.63
LTBP3-209ENST00000527792 KRTAP5-7Q6L8G8 165 aa4.89□□□□□ -1.63
LTBP3-209ENST00000527792 SPRR5A0A1B0GTR4 108 aa4.83□□□□□ -1.64
LTBP3-209ENST00000527792 KRTAP5-5Q701N2 237 aaPredicted RBP4.8□□□□□ -1.64
LTBP3-209ENST00000527792 KRTAP20-2Q3LI61 65 aa4.71□□□□□ -1.66
LTBP3-209ENST00000527792 MT1AP04731 61 aa4.67□□□□□ -1.66
LTBP3-209ENST00000527792 KRTAP12-4P60329 112 aa4.62□□□□□ -1.67
LTBP3-209ENST00000527792 KRTAP6-1Q3LI64 71 aa4.62□□□□□ -1.67
LTBP3-209ENST00000527792 LUZP6Q538Z0 58 aa4.62□□□□□ -1.67
LTBP3-209ENST00000527792 SYNE1Q8NF91 8797 aaKnown RBP4.48□□□□□ -1.69
LTBP3-209ENST00000527792 KRTAP6-2Q3LI66 62 aa4.32□□□□□ -1.72
LTBP3-209ENST00000527792 MT3P25713 68 aa4.27□□□□□ -1.73
LTBP3-209ENST00000527792 KRTAP5-2Q701N4 177 aa4.27□□□□□ -1.73
LTBP3-209ENST00000527792 KRTAP5-8O75690 187 aa4.25□□□□□ -1.73
LTBP3-209ENST00000527792 AHNAKQ09666 5890 aaKnown RBP4.25□□□□□ -1.73
LTBP3-209ENST00000527792 NDUFAF8A1L188 74 aa4.24□□□□□ -1.73
LTBP3-209ENST00000527792 KRTAP5-11Q6L8G4 156 aa4.24□□□□□ -1.73
LTBP3-209ENST00000527792 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.24□□□□□ -1.73
LTBP3-209ENST00000527792 MUC5ACP98088 5654 aa4.24□□□□□ -1.73
LTBP3-209ENST00000527792 A0A0A0MQY5 61 aa4.23□□□□□ -1.73
LTBP3-209ENST00000527792 MUC5BQ9HC84 5762 aaPredicted RBP4.22□□□□□ -1.73
LTBP3-209ENST00000527792 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
LTBP3-209ENST00000527792 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
LTBP3-209ENST00000527792 KRTAP5-1Q6L8H4 278 aa3.91□□□□□ -1.78
LTBP3-209ENST00000527792 LCE3DQ9BYE3 92 aa3.89□□□□□ -1.79
LTBP3-209ENST00000527792 LCE3EQ5T5B0 92 aa3.75□□□□□ -1.81
LTBP3-209ENST00000527792 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
LTBP3-209ENST00000527792 LCE1BQ5T7P3 118 aa3.58□□□□□ -1.84
LTBP3-209ENST00000527792 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
LTBP3-209ENST00000527792 LCE1CQ5T751 118 aa3.48□□□□□ -1.85
LTBP3-209ENST00000527792 INE1O15225 51 aa3.47□□□□□ -1.85
LTBP3-209ENST00000527792 PRM1P04553 51 aa3.12□□□□□ -1.91
LTBP3-209ENST00000527792 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
LTBP3-209ENST00000527792 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
LTBP3-209ENST00000527792 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
LTBP3-209ENST00000527792 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
LTBP3-209ENST00000527792 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 91.9 ms