RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 PRO2289Q9P1D8 64 aa4.12□□□□□ -1.75
CAPN1-210ENST00000527699 KRTAP4-8A0A0G2JLE6 195 aa4.11□□□□□ -1.75
CAPN1-210ENST00000527699 PLAC4Q8WY50 150 aa4.11□□□□□ -1.75
CAPN1-210ENST00000527699 KRTAP4-8Q9BYQ9 185 aa4.11□□□□□ -1.75
CAPN1-210ENST00000527699 KRTAP5-7Q6L8G8 165 aa4.1□□□□□ -1.75
CAPN1-210ENST00000527699 P0C880 135 aa4.09□□□□□ -1.75
CAPN1-210ENST00000527699 LCE1DQ5T752 114 aa4.09□□□□□ -1.75
CAPN1-210ENST00000527699 KRTAP12-1P59990 96 aa4.05□□□□□ -1.76
CAPN1-210ENST00000527699 KRTAP12-2P59991 146 aa4.05□□□□□ -1.76
CAPN1-210ENST00000527699 KRTAP15-1Q3LI76 137 aa4.04□□□□□ -1.76
CAPN1-210ENST00000527699 R4GN34 69 aa4.03□□□□□ -1.76
CAPN1-210ENST00000527699 C10orf95Q9H7T3 257 aa4.02□□□□□ -1.77
CAPN1-210ENST00000527699 MT4P47944 62 aa4.01□□□□□ -1.77
CAPN1-210ENST00000527699 KRTAP10-7P60409 375 aaPredicted RBP4.01□□□□□ -1.77
CAPN1-210ENST00000527699 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
CAPN1-210ENST00000527699 PP632Q6XCG6 107 aa3.92□□□□□ -1.78
CAPN1-210ENST00000527699 KRTAP10-12P60413 245 aa3.9□□□□□ -1.79
CAPN1-210ENST00000527699 KRTAP5-3Q6L8H2 238 aa3.9□□□□□ -1.79
CAPN1-210ENST00000527699 LCE4AQ5TA78 99 aa3.85□□□□□ -1.79
CAPN1-210ENST00000527699 LUZP6Q538Z0 58 aa3.82□□□□□ -1.8
CAPN1-210ENST00000527699 CAMK2N1Q7Z7J9 78 aa3.78□□□□□ -1.8
CAPN1-210ENST00000527699 AHNAKQ09666 5890 aaKnown RBP3.75□□□□□ -1.81
CAPN1-210ENST00000527699 KRTAP23-1A1A580 65 aa3.75□□□□□ -1.81
CAPN1-210ENST00000527699 A0A0A0MQY5 61 aa3.74□□□□□ -1.81
CAPN1-210ENST00000527699 KRTAP4-6Q9BYQ5 205 aa3.74□□□□□ -1.81
CAPN1-210ENST00000527699 LCE5AQ5TCM9 118 aa3.71□□□□□ -1.82
CAPN1-210ENST00000527699 KRTAP19-7Q3SYF9 63 aa3.7□□□□□ -1.82
CAPN1-210ENST00000527699 MT1EP04732 61 aa3.69□□□□□ -1.82
CAPN1-210ENST00000527699 TNP1P09430 55 aa3.69□□□□□ -1.82
CAPN1-210ENST00000527699 KRTAP19-3Q7Z4W3 81 aa3.69□□□□□ -1.82
CAPN1-210ENST00000527699 KRTAP19-5Q3LI72 72 aa3.61□□□□□ -1.83
CAPN1-210ENST00000527699 MUC5ACP98088 5654 aa3.6□□□□□ -1.83
CAPN1-210ENST00000527699 KRTAP5-4Q6L8H1 288 aa3.56□□□□□ -1.84
CAPN1-210ENST00000527699 KRTAP4-3Q9BYR4 195 aa3.56□□□□□ -1.84
CAPN1-210ENST00000527699 MT1GP13640 62 aa3.55□□□□□ -1.84
CAPN1-210ENST00000527699 MUC5BQ9HC84 5762 aaPredicted RBP3.55□□□□□ -1.84
CAPN1-210ENST00000527699 MT1MQ8N339 61 aa3.54□□□□□ -1.84
CAPN1-210ENST00000527699 KRTAP4-7Q9BYR0 210 aa3.53□□□□□ -1.84
CAPN1-210ENST00000527699 MT1LQ93083 61 aa3.49□□□□□ -1.85
CAPN1-210ENST00000527699 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
CAPN1-210ENST00000527699 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
CAPN1-210ENST00000527699 INE1O15225 51 aa3.39□□□□□ -1.87
CAPN1-210ENST00000527699 KRTAP4-11Q9BYQ6 195 aa3.37□□□□□ -1.87
CAPN1-210ENST00000527699 KRTAP5-8O75690 187 aa3.36□□□□□ -1.87
CAPN1-210ENST00000527699 KRTAP9-9Q9BYP9 154 aa3.3□□□□□ -1.88
CAPN1-210ENST00000527699 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
CAPN1-210ENST00000527699 LOC100996750A0A140TA64 210 aa3.24□□□□□ -1.89
CAPN1-210ENST00000527699 KRTAP12-3P60328 96 aa3.24□□□□□ -1.89
CAPN1-210ENST00000527699 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
CAPN1-210ENST00000527699 KRTAP5-5Q701N2 237 aaPredicted RBP3.21□□□□□ -1.9
CAPN1-210ENST00000527699 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
CAPN1-210ENST00000527699 OBSCNQ5VST9 7968 aa3.11□□□□□ -1.91
CAPN1-210ENST00000527699 KRTAP19-4Q3LI73 84 aa3.09□□□□□ -1.91
CAPN1-210ENST00000527699 LCE3CQ5T5A8 94 aa3.04□□□□□ -1.92
CAPN1-210ENST00000527699 KRTAP6-1Q3LI64 71 aa3□□□□□ -1.93
CAPN1-210ENST00000527699 MT1AP04731 61 aa2.95□□□□□ -1.94
CAPN1-210ENST00000527699 KRTAP6-2Q3LI66 62 aa2.9□□□□□ -1.95
CAPN1-210ENST00000527699 KRTAP9-4Q9BYQ2 154 aa2.89□□□□□ -1.95
CAPN1-210ENST00000527699 KRTAP9-6A8MVA2 160 aa2.84□□□□□ -1.95
CAPN1-210ENST00000527699 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
CAPN1-210ENST00000527699 MT3P25713 68 aa2.7□□□□□ -1.98
CAPN1-210ENST00000527699 KRTAP4-2Q9BYR5 136 aa2.69□□□□□ -1.98
CAPN1-210ENST00000527699 KRTAP4-12Q9BQ66 201 aa2.55□□□□□ -2
CAPN1-210ENST00000527699 PHGR1C9JFL3 82 aa2.53□□□□□ -2
CAPN1-210ENST00000527699 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
CAPN1-210ENST00000527699 LCE1EQ5T753 118 aa2.47□□□□□ -2.01
CAPN1-210ENST00000527699 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
CAPN1-210ENST00000527699 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
CAPN1-210ENST00000527699 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
CAPN1-210ENST00000527699 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
CAPN1-210ENST00000527699 PRM1P04553 51 aa2.27□□□□□ -2.05
CAPN1-210ENST00000527699 LCE1FQ5T754 118 aa2.23□□□□□ -2.05
CAPN1-210ENST00000527699 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.04□□□□□ -2.08
CAPN1-210ENST00000527699 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
CAPN1-210ENST00000527699 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
CAPN1-210ENST00000527699 KRTAP4-4Q9BYR3 166 aa1.93□□□□□ -2.1
CAPN1-210ENST00000527699 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
CAPN1-210ENST00000527699 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 58.7 ms