RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 PRLHP81277 87 aa0.56□□□□□ -2.32
TRAPPC4-207ENST00000526141 TIMM8BQ9Y5J9 83 aaPredicted RBP0.56□□□□□ -2.32
TRAPPC4-207ENST00000526141 COX14Q96I36 57 aa0.55□□□□□ -2.32
TRAPPC4-207ENST00000526141 H0YGG7 62 aa0.54□□□□□ -2.32
TRAPPC4-207ENST00000526141 DEFB106AQ8N104 65 aa0.54□□□□□ -2.32
TRAPPC4-207ENST00000526141 MT1HP80294 61 aa0.53□□□□□ -2.32
TRAPPC4-207ENST00000526141 SMIM2Q9BVW6 85 aa0.53□□□□□ -2.32
TRAPPC4-207ENST00000526141 PRM1P04553 51 aa0.52□□□□□ -2.33
TRAPPC4-207ENST00000526141 KRTAP19-2Q3LHN2 52 aa0.52□□□□□ -2.33
TRAPPC4-207ENST00000526141 DEFB104AQ8WTQ1 72 aa0.52□□□□□ -2.33
TRAPPC4-207ENST00000526141 KRTAP19-6Q3LI70 58 aa0.51□□□□□ -2.33
TRAPPC4-207ENST00000526141 DEFB136Q30KP8 78 aa0.5□□□□□ -2.33
TRAPPC4-207ENST00000526141 KRTAP21-1Q3LI58 79 aa0.5□□□□□ -2.33
TRAPPC4-207ENST00000526141 H3BUX3 64 aa0.49□□□□□ -2.33
TRAPPC4-207ENST00000526141 H3BSH0 61 aa0.48□□□□□ -2.33
TRAPPC4-207ENST00000526141 SPRR2EP22531 72 aa0.48□□□□□ -2.33
TRAPPC4-207ENST00000526141 SPRR2BP35325 72 aa0.48□□□□□ -2.33
TRAPPC4-207ENST00000526141 SPRR2AP35326 72 aa0.48□□□□□ -2.33
TRAPPC4-207ENST00000526141 WFDC10BQ8IUB3 73 aa0.48□□□□□ -2.33
TRAPPC4-207ENST00000526141 NOP10Q9NPE3 64 aaKnown RBP0.48□□□□□ -2.33
TRAPPC4-207ENST00000526141 KAAG1Q9UBP8 84 aa0.48□□□□□ -2.33
TRAPPC4-207ENST00000526141 IGLV5-48A0A075B6I7 105 aa0.46□□□□□ -2.34
TRAPPC4-207ENST00000526141 NDUFA1O15239 70 aa0.46□□□□□ -2.34
TRAPPC4-207ENST00000526141 SPRR2DP22532 72 aa0.46□□□□□ -2.34
TRAPPC4-207ENST00000526141 DEFB4AO15263 64 aa0.45□□□□□ -2.34
TRAPPC4-207ENST00000526141 MT2AP02795 61 aa0.44□□□□□ -2.34
TRAPPC4-207ENST00000526141 MT1FP04733 61 aa0.44□□□□□ -2.34
TRAPPC4-207ENST00000526141 MT4P47944 62 aa0.44□□□□□ -2.34
TRAPPC4-207ENST00000526141 DEFB131AP59861 70 aa0.44□□□□□ -2.34
TRAPPC4-207ENST00000526141 SYNE1Q8NF91 8797 aaKnown RBP0.44□□□□□ -2.34
TRAPPC4-207ENST00000526141 C9orf92A6NGG3 77 aa0.43□□□□□ -2.34
TRAPPC4-207ENST00000526141 SPRR2FQ96RM1 72 aa0.43□□□□□ -2.34
TRAPPC4-207ENST00000526141 MMP24-AS1A0A0U1RRL7 71 aa0.41□□□□□ -2.34
TRAPPC4-207ENST00000526141 A8MTW9 85 aa0.38□□□□□ -2.35
TRAPPC4-207ENST00000526141 H3BNG1 76 aa0.38□□□□□ -2.35
TRAPPC4-207ENST00000526141 M0QY20 66 aa0.38□□□□□ -2.35
TRAPPC4-207ENST00000526141 HTN3P15516 51 aa0.37□□□□□ -2.35
TRAPPC4-207ENST00000526141 KRTAP20-2Q3LI61 65 aa0.36□□□□□ -2.35
TRAPPC4-207ENST00000526141 M0QZ58 72 aa0.35□□□□□ -2.35
TRAPPC4-207ENST00000526141 MT1BP07438 61 aa0.35□□□□□ -2.35
TRAPPC4-207ENST00000526141 KRTAP8-1Q8IUC2 63 aa0.34□□□□□ -2.36
TRAPPC4-207ENST00000526141 PHGR1C9JFL3 82 aa0.33□□□□□ -2.36
TRAPPC4-207ENST00000526141 SNRPGP62308 76 aaKnown RBP0.33□□□□□ -2.36
TRAPPC4-207ENST00000526141 A0A096LPF7 62 aa0.32□□□□□ -2.36
TRAPPC4-207ENST00000526141 TNP1P09430 55 aa0.32□□□□□ -2.36
TRAPPC4-207ENST00000526141 SPART-AS1P0CW21 52 aa0.32□□□□□ -2.36
TRAPPC4-207ENST00000526141 LEAP2Q969E1 77 aa0.32□□□□□ -2.36
TRAPPC4-207ENST00000526141 APELAP0DMC3 54 aa0.31□□□□□ -2.36
TRAPPC4-207ENST00000526141 DEFB1P60022 68 aa0.3□□□□□ -2.36
TRAPPC4-207ENST00000526141 A0A096LNI7 61 aa0.28□□□□□ -2.36
TRAPPC4-207ENST00000526141 POLR2KP53803 58 aaKnown RBP0.28□□□□□ -2.36
TRAPPC4-207ENST00000526141 KRTAP19-8Q3LI54 63 aa0.28□□□□□ -2.36
TRAPPC4-207ENST00000526141 KRTAP6-2Q3LI66 62 aa0.28□□□□□ -2.36
TRAPPC4-207ENST00000526141 LINC01556Q5JQF7 62 aa0.28□□□□□ -2.36
TRAPPC4-207ENST00000526141 CLPSL2Q6UWE3 100 aa0.28□□□□□ -2.36
TRAPPC4-207ENST00000526141 MT1AP04731 61 aa0.27□□□□□ -2.37
TRAPPC4-207ENST00000526141 RHPN1-AS1Q9BWJ2 59 aa0.27□□□□□ -2.37
TRAPPC4-207ENST00000526141 MT1XP80297 61 aa0.26□□□□□ -2.37
TRAPPC4-207ENST00000526141 KRTAP19-7Q3SYF9 63 aa0.25□□□□□ -2.37
TRAPPC4-207ENST00000526141 RPL39P5Q59GN2 51 aa0.25□□□□□ -2.37
TRAPPC4-207ENST00000526141 MT1MQ8N339 61 aa0.25□□□□□ -2.37
TRAPPC4-207ENST00000526141 MT1EP04732 61 aa0.24□□□□□ -2.37
TRAPPC4-207ENST00000526141 SPRR2GQ9BYE4 73 aa0.23□□□□□ -2.37
TRAPPC4-207ENST00000526141 K7EIM0 57 aa0.22□□□□□ -2.37
TRAPPC4-207ENST00000526141 HTN1P15515 57 aa0.22□□□□□ -2.37
TRAPPC4-207ENST00000526141 RPL39P62891 51 aaKnown RBP0.22□□□□□ -2.37
TRAPPC4-207ENST00000526141 TMEM167AQ8TBQ9 72 aa0.22□□□□□ -2.37
TRAPPC4-207ENST00000526141 TTTY10Q9BZA0 68 aa0.21□□□□□ -2.38
TRAPPC4-207ENST00000526141 MT1GP13640 62 aa0.2□□□□□ -2.38
TRAPPC4-207ENST00000526141 PRCDQ00LT1 54 aa0.2□□□□□ -2.38
TRAPPC4-207ENST00000526141 LINC01590Q5TEZ4 76 aa0.2□□□□□ -2.38
TRAPPC4-207ENST00000526141 MT1LQ93083 61 aa0.19□□□□□ -2.38
TRAPPC4-207ENST00000526141 RPS29P62273 56 aaKnown RBP0.18□□□□□ -2.38
TRAPPC4-207ENST00000526141 KRTAP6-1Q3LI64 71 aa0.18□□□□□ -2.38
TRAPPC4-207ENST00000526141 RPL39LQ96EH5 51 aaKnown RBP0.17□□□□□ -2.38
TRAPPC4-207ENST00000526141 TOMM7Q9P0U1 55 aa0.17□□□□□ -2.38
TRAPPC4-207ENST00000526141 KRTAP19-5Q3LI72 72 aa0.15□□□□□ -2.39
TRAPPC4-207ENST00000526141 ARHGAP5-AS1Q96IT6 56 aa0.12□□□□□ -2.39
Retrieved 78 of 20,778 RNA–protein pairs in 97.4 ms