RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 COX17Q14061 63 aa1.38□□□□□ -2.19
NSMCE2-211ENST00000523549 KRTAP20-2Q3LI61 65 aa1.38□□□□□ -2.19
NSMCE2-211ENST00000523549 COA5Q86WW8 74 aa1.38□□□□□ -2.19
NSMCE2-211ENST00000523549 KCNQ1DNQ9H478 68 aa1.38□□□□□ -2.19
NSMCE2-211ENST00000523549 LINC00472Q9H8W2 130 aa1.38□□□□□ -2.19
NSMCE2-211ENST00000523549 SYNE1Q8NF91 8797 aaKnown RBP1.38□□□□□ -2.19
NSMCE2-211ENST00000523549 RNASE3P12724 160 aaKnown RBP1.37□□□□□ -2.19
NSMCE2-211ENST00000523549 H0YGX0 51 aa1.36□□□□□ -2.19
NSMCE2-211ENST00000523549 RPS29P62273 56 aaKnown RBP1.36□□□□□ -2.19
NSMCE2-211ENST00000523549 Q96NJ1 140 aa1.36□□□□□ -2.19
NSMCE2-211ENST00000523549 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.35□□□□□ -2.19
NSMCE2-211ENST00000523549 A0A0G2JQZ4 141 aa1.35□□□□□ -2.19
NSMCE2-211ENST00000523549 ETDCA0A1B0GVM5 59 aa1.35□□□□□ -2.19
NSMCE2-211ENST00000523549 IGKV2-29A2NJV5 120 aaPredicted RBP1.35□□□□□ -2.19
NSMCE2-211ENST00000523549 KRTAP19-8Q3LI54 63 aa1.35□□□□□ -2.19
NSMCE2-211ENST00000523549 COX7BP24311 80 aa1.34□□□□□ -2.19
NSMCE2-211ENST00000523549 PRLHP81277 87 aa1.34□□□□□ -2.19
NSMCE2-211ENST00000523549 CNFNQ9BYD5 112 aa1.34□□□□□ -2.19
NSMCE2-211ENST00000523549 A0A1B0GU69 56 aa1.33□□□□□ -2.2
NSMCE2-211ENST00000523549 NCR3O14931 201 aa1.33□□□□□ -2.2
NSMCE2-211ENST00000523549 KRTAP13-4Q3LI77 160 aa1.33□□□□□ -2.2
NSMCE2-211ENST00000523549 SMIM2Q9BVW6 85 aa1.32□□□□□ -2.2
NSMCE2-211ENST00000523549 INE1O15225 51 aa1.31□□□□□ -2.2
NSMCE2-211ENST00000523549 IAPPP10997 89 aa1.31□□□□□ -2.2
NSMCE2-211ENST00000523549 ACYP2P14621 99 aa1.3□□□□□ -2.2
NSMCE2-211ENST00000523549 LINC00308Q8TCZ7 52 aa1.3□□□□□ -2.2
NSMCE2-211ENST00000523549 NDUFA1O15239 70 aa1.29□□□□□ -2.2
NSMCE2-211ENST00000523549 Q6ZQY7 126 aa1.29□□□□□ -2.2
NSMCE2-211ENST00000523549 C6orf48Q9UBA6 75 aa1.29□□□□□ -2.2
NSMCE2-211ENST00000523549 CRIP1P50238 77 aa1.27□□□□□ -2.21
NSMCE2-211ENST00000523549 LINC00158P58513 81 aa1.27□□□□□ -2.21
NSMCE2-211ENST00000523549 UNQ6190/PRO20217Q6UXQ8 127 aa1.27□□□□□ -2.21
NSMCE2-211ENST00000523549 SMIM11BQ8TCY0 68 aa1.27□□□□□ -2.21
NSMCE2-211ENST00000523549 Q8IZM0 81 aa1.26□□□□□ -2.21
NSMCE2-211ENST00000523549 MT1XP80297 61 aa1.25□□□□□ -2.21
NSMCE2-211ENST00000523549 Q6ZRX8 168 aa1.25□□□□□ -2.21
NSMCE2-211ENST00000523549 SSBP3-AS1Q7Z2R9 100 aa1.25□□□□□ -2.21
NSMCE2-211ENST00000523549 SPRR2GQ9BYE4 73 aa1.25□□□□□ -2.21
NSMCE2-211ENST00000523549 CDKN2A-AS1Q9UH64 79 aa1.25□□□□□ -2.21
NSMCE2-211ENST00000523549 PLAC4Q8WY50 150 aa1.24□□□□□ -2.21
NSMCE2-211ENST00000523549 KRTAP19-3Q7Z4W3 81 aa1.23□□□□□ -2.21
NSMCE2-211ENST00000523549 POLR2KP53803 58 aaKnown RBP1.22□□□□□ -2.21
NSMCE2-211ENST00000523549 LINC00575Q6W349 94 aa1.22□□□□□ -2.21
NSMCE2-211ENST00000523549 KRTAP12-1P59990 96 aa1.2□□□□□ -2.22
NSMCE2-211ENST00000523549 H0YAA0 97 aa1.19□□□□□ -2.22
NSMCE2-211ENST00000523549 K7EQZ3 153 aa1.19□□□□□ -2.22
NSMCE2-211ENST00000523549 RPL39P62891 51 aaKnown RBP1.19□□□□□ -2.22
NSMCE2-211ENST00000523549 TP53AIP1Q9HCN2 124 aa1.19□□□□□ -2.22
NSMCE2-211ENST00000523549 RPL39LQ96EH5 51 aaKnown RBP1.18□□□□□ -2.22
NSMCE2-211ENST00000523549 IGLV5-48A0A075B6I7 105 aa1.17□□□□□ -2.22
NSMCE2-211ENST00000523549 M0QY20 66 aa1.17□□□□□ -2.22
NSMCE2-211ENST00000523549 MRPL34Q9BQ48 92 aaKnown RBP1.17□□□□□ -2.22
NSMCE2-211ENST00000523549 CRIPTQ9P021 101 aa1.16□□□□□ -2.22
NSMCE2-211ENST00000523549 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
NSMCE2-211ENST00000523549 MT1EP04732 61 aa1.14□□□□□ -2.23
NSMCE2-211ENST00000523549 WFDC13Q8IUB5 93 aa1.14□□□□□ -2.23
NSMCE2-211ENST00000523549 MT1MQ8N339 61 aa1.13□□□□□ -2.23
NSMCE2-211ENST00000523549 MMP24-AS1A0A0U1RRL7 71 aa1.12□□□□□ -2.23
NSMCE2-211ENST00000523549 KRTAP19-7Q3SYF9 63 aa1.12□□□□□ -2.23
NSMCE2-211ENST00000523549 MT1GP13640 62 aa1.11□□□□□ -2.23
NSMCE2-211ENST00000523549 H1FX-AS1Q4G0G2 97 aa1.11□□□□□ -2.23
NSMCE2-211ENST00000523549 C10orf95Q9H7T3 257 aa1.11□□□□□ -2.23
NSMCE2-211ENST00000523549 TOMM7Q9P0U1 55 aa1.08□□□□□ -2.24
NSMCE2-211ENST00000523549 SPRR1AP35321 89 aa1.04□□□□□ -2.24
NSMCE2-211ENST00000523549 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
NSMCE2-211ENST00000523549 DEFB105AQ8NG35 78 aa1.02□□□□□ -2.25
NSMCE2-211ENST00000523549 SPRR1BP22528 89 aa1.01□□□□□ -2.25
NSMCE2-211ENST00000523549 S4R3F8 94 aa1.01□□□□□ -2.25
NSMCE2-211ENST00000523549 MT1LQ93083 61 aa0.99□□□□□ -2.25
NSMCE2-211ENST00000523549 KRTAP6-2Q3LI66 62 aa0.96□□□□□ -2.26
NSMCE2-211ENST00000523549 KRTAP19-5Q3LI72 72 aa0.95□□□□□ -2.26
NSMCE2-211ENST00000523549 A0A0D9SG42 100 aa0.91□□□□□ -2.26
NSMCE2-211ENST00000523549 KRTAP6-1Q3LI64 71 aa0.89□□□□□ -2.27
NSMCE2-211ENST00000523549 M0QZ58 72 aa0.86□□□□□ -2.27
NSMCE2-211ENST00000523549 KRTAP21-1Q3LI58 79 aa0.84□□□□□ -2.27
NSMCE2-211ENST00000523549 MT1AP04731 61 aa0.81□□□□□ -2.28
NSMCE2-211ENST00000523549 TNP1P09430 55 aa0.78□□□□□ -2.28
NSMCE2-211ENST00000523549 PRM1P04553 51 aa0.66□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 10.9 ms