RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 FAM25CB3EWG5 89 aa-0.42□□□□□ -2.48
SKP1-205ENST00000519054 FAM25GB3EWG6 89 aa-0.42□□□□□ -2.48
SKP1-205ENST00000519054 SFTA2Q6UW10 78 aa-0.42□□□□□ -2.48
SKP1-205ENST00000519054 DEFB107AQ8IZN7 70 aa-0.42□□□□□ -2.48
SKP1-205ENST00000519054 ACYP1P07311 99 aa-0.43□□□□□ -2.48
SKP1-205ENST00000519054 IGLC3P0DOY3 106 aa-0.44□□□□□ -2.48
SKP1-205ENST00000519054 A0A1B0GUT8 65 aa-0.45□□□□□ -2.48
SKP1-205ENST00000519054 LINC00587B1AMM8 73 aa-0.46□□□□□ -2.48
SKP1-205ENST00000519054 S100PP25815 95 aa-0.46□□□□□ -2.48
SKP1-205ENST00000519054 WHAMMP3Q1A5X7 153 aa-0.46□□□□□ -2.48
SKP1-205ENST00000519054 C8orf59Q8N0T1 100 aaPredicted RBP-0.46□□□□□ -2.48
SKP1-205ENST00000519054 MYMXA0A1B0GTQ4 84 aa-0.47□□□□□ -2.48
SKP1-205ENST00000519054 APOC3P02656 99 aa-0.47□□□□□ -2.48
SKP1-205ENST00000519054 S100A8P05109 93 aa-0.47□□□□□ -2.48
SKP1-205ENST00000519054 MRPL54Q6P161 138 aaKnown RBP-0.47□□□□□ -2.48
SKP1-205ENST00000519054 LINC00308Q8TCZ7 52 aa-0.47□□□□□ -2.48
SKP1-205ENST00000519054 SMIM31A0A1B0GVY4 71 aa-0.48□□□□□ -2.49
SKP1-205ENST00000519054 CHKB-CPT1BH3BT56 60 aa-0.48□□□□□ -2.49
SKP1-205ENST00000519054 AKAIN1P0CW23 69 aa-0.48□□□□□ -2.49
SKP1-205ENST00000519054 GNG4P50150 75 aa-0.48□□□□□ -2.49
SKP1-205ENST00000519054 SMIM27A0A1W2PRY6 76 aa-0.49□□□□□ -2.49
SKP1-205ENST00000519054 TCEAL7Q9BRU2 100 aa-0.49□□□□□ -2.49
SKP1-205ENST00000519054 NAP1L6A6NFF2 107 aa-0.5□□□□□ -2.49
SKP1-205ENST00000519054 K7EMI3 77 aa-0.5□□□□□ -2.49
SKP1-205ENST00000519054 C12orf57Q99622 126 aa-0.5□□□□□ -2.49
SKP1-205ENST00000519054 A0A1B0GV90 55 aa-0.51□□□□□ -2.49
SKP1-205ENST00000519054 DLEU1O43261 78 aa-0.52□□□□□ -2.49
SKP1-205ENST00000519054 HIGD1BQ9P298 99 aa-0.52□□□□□ -2.49
SKP1-205ENST00000519054 H7BZZ5 65 aa-0.54□□□□□ -2.5
SKP1-205ENST00000519054 SERF2P84101 59 aa-0.54□□□□□ -2.5
SKP1-205ENST00000519054 UQCR10Q9UDW1 63 aa-0.54□□□□□ -2.5
SKP1-205ENST00000519054 ATP5EP56381 51 aaPredicted RBP-0.56□□□□□ -2.5
SKP1-205ENST00000519054 PMCHL1Q16048 86 aa-0.57□□□□□ -2.5
SKP1-205ENST00000519054 MANBALQ9NQG1 85 aa-0.57□□□□□ -2.5
SKP1-205ENST00000519054 GNG13Q9P2W3 67 aa-0.57□□□□□ -2.5
SKP1-205ENST00000519054 PRO1854Q9UHT4 67 aa-0.58□□□□□ -2.5
SKP1-205ENST00000519054 FAUP35544 74 aaKnown RBP-0.59□□□□□ -2.5
SKP1-205ENST00000519054 NREPQ16612 68 aa-0.59□□□□□ -2.5
SKP1-205ENST00000519054 LINC01549A6NIU2 74 aa-0.6□□□□□ -2.51
SKP1-205ENST00000519054 MPC2O95563 127 aa-0.6□□□□□ -2.51
SKP1-205ENST00000519054 COX6CP09669 75 aa-0.6□□□□□ -2.51
SKP1-205ENST00000519054 BVES-AS1Q5T3Y7 98 aa-0.6□□□□□ -2.51
SKP1-205ENST00000519054 TOMM5Q8N4H5 51 aa-0.6□□□□□ -2.51
SKP1-205ENST00000519054 SVBPQ8N300 66 aa-0.61□□□□□ -2.51
SKP1-205ENST00000519054 PLNP26678 52 aa-0.62□□□□□ -2.51
SKP1-205ENST00000519054 PMCHL2Q9BQD1 86 aa-0.62□□□□□ -2.51
SKP1-205ENST00000519054 S100A1P23297 94 aa-0.63□□□□□ -2.51
SKP1-205ENST00000519054 S100ZQ8WXG8 99 aa-0.63□□□□□ -2.51
SKP1-205ENST00000519054 SMCO4Q9NRQ5 59 aa-0.63□□□□□ -2.51
SKP1-205ENST00000519054 H0Y9P7 68 aa-0.65□□□□□ -2.51
SKP1-205ENST00000519054 SYS1-DBNDD2H3BUS1 97 aa-0.65□□□□□ -2.51
SKP1-205ENST00000519054 COX8AP10176 69 aa-0.65□□□□□ -2.51
SKP1-205ENST00000519054 HSD52Q0P140 79 aa-0.65□□□□□ -2.51
SKP1-205ENST00000519054 H0YGX0 51 aa-0.66□□□□□ -2.52
SKP1-205ENST00000519054 A0A1B0GU69 56 aa-0.67□□□□□ -2.52
SKP1-205ENST00000519054 ADIRFQ15847 76 aa-0.67□□□□□ -2.52
SKP1-205ENST00000519054 KRTDAPP60985 99 aa-0.68□□□□□ -2.52
SKP1-205ENST00000519054 UMAD1C9J7I0 102 aa-0.69□□□□□ -2.52
SKP1-205ENST00000519054 SERP2Q8N6R1 65 aa-0.69□□□□□ -2.52
SKP1-205ENST00000519054 GTF2H5Q6ZYL4 71 aa-0.7□□□□□ -2.52
SKP1-205ENST00000519054 ATOX1O00244 68 aa-0.71□□□□□ -2.52
SKP1-205ENST00000519054 C18orf32Q8TCD1 76 aa-0.72□□□□□ -2.52
SKP1-205ENST00000519054 LEPROTL1O95214 131 aa-0.74□□□□□ -2.53
SKP1-205ENST00000519054 TMEM218A2RU14 115 aa-0.75□□□□□ -2.53
SKP1-205ENST00000519054 C14orf144Q96I85 54 aa-0.75□□□□□ -2.53
SKP1-205ENST00000519054 VAMP8Q9BV40 100 aa-0.75□□□□□ -2.53
SKP1-205ENST00000519054 GNGT1P63211 74 aa-0.76□□□□□ -2.53
SKP1-205ENST00000519054 KANTRA0A1W2PQU2 76 aa-0.8□□□□□ -2.54
SKP1-205ENST00000519054 UBL5Q9BZL1 73 aa-0.83□□□□□ -2.54
SKP1-205ENST00000519054 ETDBQ3ZM63 59 aa-0.85□□□□□ -2.55
SKP1-205ENST00000519054 COL5A1-AS1Q5SY13 56 aa-0.86□□□□□ -2.55
SKP1-205ENST00000519054 PEA15Q15121 130 aa-0.87□□□□□ -2.55
SKP1-205ENST00000519054 ATXN8Q156A1 80 aa-0.87□□□□□ -2.55
SKP1-205ENST00000519054 Q9H521 79 aa-0.89□□□□□ -2.55
SKP1-205ENST00000519054 M0R143 59 aa-0.94□□□□□ -2.56
SKP1-205ENST00000519054 PYY3Q5JQD4 70 aa-1.06□□□□□ -2.58
SKP1-205ENST00000519054 ATP5EP2Q5VTU8 51 aa-1.06□□□□□ -2.58
SKP1-205ENST00000519054 LINC00643Q86TS7 51 aa-1.09□□□□□ -2.58
Retrieved 78 of 20,778 RNA–protein pairs in 108.8 ms